RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 VGLL2Q8N8G2 317 aa16.17■□□□□ 0.18
COL9A2-207ENST00000482722 GBP3Q9H0R5 595 aa16.17■□□□□ 0.18
COL9A2-207ENST00000482722 MED4Q9NPJ6 270 aa16.17■□□□□ 0.18
COL9A2-207ENST00000482722 ZSWIM5Q9P217 1185 aa16.17■□□□□ 0.18
COL9A2-207ENST00000482722 THRAP3Q9Y2W1 955 aaKnown RBP16.17■□□□□ 0.18
COL9A2-207ENST00000482722 SPEF2Q9C093 1822 aa16.17■□□□□ 0.18
COL9A2-207ENST00000482722 ERVV-1B6SEH8 477 aa16.17■□□□□ 0.18
COL9A2-207ENST00000482722 GUCY1A2P33402 732 aa16.17■□□□□ 0.18
COL9A2-207ENST00000482722 KRI1Q8N9T8 703 aaKnown RBP16.17■□□□□ 0.18
COL9A2-207ENST00000482722 ENOX1Q8TC92 643 aaKnown RBP16.17■□□□□ 0.18
COL9A2-207ENST00000482722 EFCAB13Q8IY85 973 aa16.16■□□□□ 0.18
COL9A2-207ENST00000482722 STRBPQ96SI9 672 aaKnown RBP16.16■□□□□ 0.18
COL9A2-207ENST00000482722 LY9Q9HBG7 655 aa16.16■□□□□ 0.18
COL9A2-207ENST00000482722 CPP00450 1065 aa16.16■□□□□ 0.18
COL9A2-207ENST00000482722 UBE3CQ15386 1083 aa16.16■□□□□ 0.18
COL9A2-207ENST00000482722 TADA2BQ86TJ2 420 aa16.16■□□□□ 0.18
COL9A2-207ENST00000482722 GPATCH11Q8N954 259 aa16.16■□□□□ 0.18
COL9A2-207ENST00000482722 MIGA1Q8NAN2 632 aa16.16■□□□□ 0.18
COL9A2-207ENST00000482722 IGDCC4Q8TDY8 1250 aa16.16■□□□□ 0.18
COL9A2-207ENST00000482722 EPB41L4AQ9HCS5 686 aaPredicted RBP16.16■□□□□ 0.18
COL9A2-207ENST00000482722 CDHR2Q9BYE9 1310 aa16.16■□□□□ 0.18
COL9A2-207ENST00000482722 SYF2O95926 243 aaKnown RBP16.16■□□□□ 0.18
COL9A2-207ENST00000482722 TDO2P48775 406 aa16.16■□□□□ 0.18
COL9A2-207ENST00000482722 SSRP1Q08945 709 aaKnown RBP16.16■□□□□ 0.18
COL9A2-207ENST00000482722 DNAJC21Q5F1R6 531 aaKnown RBP16.16■□□□□ 0.18
COL9A2-207ENST00000482722 IFNL3Q8IZI9 196 aa16.16■□□□□ 0.18
COL9A2-207ENST00000482722 AFAP1L1Q8TED9 768 aa16.16■□□□□ 0.18
COL9A2-207ENST00000482722 NUP133Q8WUM0 1156 aa16.16■□□□□ 0.18
COL9A2-207ENST00000482722 CDCA7Q9BWT1 371 aaPredicted RBP16.16■□□□□ 0.18
COL9A2-207ENST00000482722 ACBD3Q9H3P7 528 aa16.16■□□□□ 0.18
COL9A2-207ENST00000482722 JAG2Q9Y219 1238 aa16.16■□□□□ 0.18
COL9A2-207ENST00000482722 LRP6O75581 1613 aa16.16■□□□□ 0.18
COL9A2-207ENST00000482722 A0A1B0GTH6 734 aa16.15■□□□□ 0.18
COL9A2-207ENST00000482722 TOB1P50616 345 aaPredicted RBP16.15■□□□□ 0.18
COL9A2-207ENST00000482722 TUBB2AQ13885 445 aa16.15■□□□□ 0.18
COL9A2-207ENST00000482722 PPFIBP1Q86W92 1011 aa16.15■□□□□ 0.18
COL9A2-207ENST00000482722 SMYD4Q8IYR2 804 aaPredicted RBP16.15■□□□□ 0.18
COL9A2-207ENST00000482722 IGSF22Q8N9C0 903 aa16.15■□□□□ 0.18
COL9A2-207ENST00000482722 SPATA5Q8NB90 893 aa16.15■□□□□ 0.18
COL9A2-207ENST00000482722 ACRBPQ8NEB7 543 aa16.15■□□□□ 0.18
COL9A2-207ENST00000482722 TUBB2BQ9BVA1 445 aa16.15■□□□□ 0.18
COL9A2-207ENST00000482722 BCL9LQ86UU0 1499 aa16.15■□□□□ 0.18
COL9A2-207ENST00000482722 COL4A1P02462 1669 aa16.15■□□□□ 0.18
COL9A2-207ENST00000482722 TUBB4BP68371 445 aa16.15■□□□□ 0.18
COL9A2-207ENST00000482722 TBC1D9BQ66K14 1250 aa16.15■□□□□ 0.18
COL9A2-207ENST00000482722 MMS22LQ6ZRQ5 1243 aa16.15■□□□□ 0.18
COL9A2-207ENST00000482722 RASGRP2Q7LDG7 609 aa16.15■□□□□ 0.18
COL9A2-207ENST00000482722 SUGP1Q8IWZ8 645 aaKnown RBP16.15■□□□□ 0.18
COL9A2-207ENST00000482722 MICALL1Q8N3F8 863 aa16.15■□□□□ 0.18
COL9A2-207ENST00000482722 MLKLQ8NB16 471 aa16.15■□□□□ 0.18
COL9A2-207ENST00000482722 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.15■□□□□ 0.18
COL9A2-207ENST00000482722 FAM217BQ9NTX9 383 aaPredicted RBP16.15■□□□□ 0.18
COL9A2-207ENST00000482722 PRPF6O94906 941 aaKnown RBP16.14■□□□□ 0.17
COL9A2-207ENST00000482722 AFMP43652 599 aa16.14■□□□□ 0.17
COL9A2-207ENST00000482722 NR5A1Q13285 461 aa16.14■□□□□ 0.17
COL9A2-207ENST00000482722 RASGRF1Q13972 1273 aa16.14■□□□□ 0.17
COL9A2-207ENST00000482722 NTRK3Q16288 839 aa16.14■□□□□ 0.17
COL9A2-207ENST00000482722 NCAPH2Q6IBW4 605 aa16.14■□□□□ 0.17
COL9A2-207ENST00000482722 BARGINQ6ZT62 677 aa16.14■□□□□ 0.17
COL9A2-207ENST00000482722 TMEM87BQ96K49 555 aa16.14■□□□□ 0.17
COL9A2-207ENST00000482722 NAPGQ99747 312 aaPredicted RBP16.14■□□□□ 0.17
COL9A2-207ENST00000482722 RNF216Q9NWF9 866 aaPredicted RBP16.14■□□□□ 0.17
COL9A2-207ENST00000482722 PCDHB6Q9Y5E3 794 aa16.14■□□□□ 0.17
COL9A2-207ENST00000482722 GNPATO15228 680 aa16.14■□□□□ 0.17
COL9A2-207ENST00000482722 NTSR2O95665 410 aa16.14■□□□□ 0.17
COL9A2-207ENST00000482722 PUM3Q15397 648 aaKnown RBP16.14■□□□□ 0.17
COL9A2-207ENST00000482722 WHAMMP3Q1A5X7 153 aa16.14■□□□□ 0.17
COL9A2-207ENST00000482722 NAA15Q9BXJ9 866 aaKnown RBP16.14■□□□□ 0.17
COL9A2-207ENST00000482722 HOOK1Q9UJC3 728 aaKnown RBP16.14■□□□□ 0.17
COL9A2-207ENST00000482722 TACC3Q9Y6A5 838 aa16.14■□□□□ 0.17
COL9A2-207ENST00000482722 WDR19Q8NEZ3 1342 aa16.14■□□□□ 0.17
COL9A2-207ENST00000482722 A0A087WUV0 522 aaPredicted RBP16.13■□□□□ 0.17
COL9A2-207ENST00000482722 SMIM22K7EJ46 135 aa16.13■□□□□ 0.17
COL9A2-207ENST00000482722 CHRM1P11229 460 aaPredicted RBP16.13■□□□□ 0.17
COL9A2-207ENST00000482722 MAP3K12Q12852 859 aa16.13■□□□□ 0.17
COL9A2-207ENST00000482722 MORC3Q14149 939 aa16.13■□□□□ 0.17
COL9A2-207ENST00000482722 MFSD6Q6ZSS7 791 aa16.13■□□□□ 0.17
COL9A2-207ENST00000482722 NOSTRINQ8IVI9 506 aa16.13■□□□□ 0.17
COL9A2-207ENST00000482722 DIS3L2Q8IYB7 885 aaKnown RBP16.13■□□□□ 0.17
COL9A2-207ENST00000482722 RIN2Q8WYP3 895 aaPredicted RBP16.13■□□□□ 0.17
COL9A2-207ENST00000482722 hCG_1642624A0A1W2PR95 340 aa16.13■□□□□ 0.17
COL9A2-207ENST00000482722 TCRBV5S4A2TA0A5A2 114 aa16.13■□□□□ 0.17
COL9A2-207ENST00000482722 GYG1P46976 350 aa16.13■□□□□ 0.17
COL9A2-207ENST00000482722 MEX3CQ5U5Q3 659 aaKnown RBP16.13■□□□□ 0.17
COL9A2-207ENST00000482722 APTXQ7Z2E3 356 aaKnown RBP16.13■□□□□ 0.17
COL9A2-207ENST00000482722 SLC4A4Q9Y6R1 1079 aa16.13■□□□□ 0.17
COL9A2-207ENST00000482722 UQCRFS1P1P0C7P4 283 aa16.12■□□□□ 0.17
COL9A2-207ENST00000482722 AARSP49588 968 aaKnown RBP eCLIP16.12■□□□□ 0.17
COL9A2-207ENST00000482722 SAFBQ15424 915 aaKnown RBP eCLIP16.12■□□□□ 0.17
COL9A2-207ENST00000482722 MCTP2Q6DN12 878 aa16.12■□□□□ 0.17
COL9A2-207ENST00000482722 LCORLQ8N3X6 602 aa16.12■□□□□ 0.17
COL9A2-207ENST00000482722 LPIN2Q92539 896 aa16.12■□□□□ 0.17
COL9A2-207ENST00000482722 DACH1Q9UI36 760 aa16.12■□□□□ 0.17
COL9A2-207ENST00000482722 COL22A1Q8NFW1 1626 aaPredicted RBP16.12■□□□□ 0.17
COL9A2-207ENST00000482722 ABCC12Q96J65 1359 aa16.12■□□□□ 0.17
COL9A2-207ENST00000482722 PATL2C9JE40 543 aaKnown RBP16.12■□□□□ 0.17
COL9A2-207ENST00000482722 SARSP49591 514 aaKnown RBP16.12■□□□□ 0.17
COL9A2-207ENST00000482722 AKAP17AQ02040 695 aaKnown RBP16.12■□□□□ 0.17
COL9A2-207ENST00000482722 WDR93Q6P2C0 686 aa16.12■□□□□ 0.17
COL9A2-207ENST00000482722 STAMQ92783 540 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms