RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 SBK1Q52WX2 424 aa11.9□□□□□ -0.5
SPTLC1-206ENST00000482632 ANKRD23Q86SG2 305 aa11.9□□□□□ -0.5
SPTLC1-206ENST00000482632 CLEC10AQ8IUN9 316 aa11.9□□□□□ -0.5
SPTLC1-206ENST00000482632 PPP4R2Q9NY27 417 aa11.9□□□□□ -0.5
SPTLC1-206ENST00000482632 USP17L10C9JJH3 530 aa11.89□□□□□ -0.51
SPTLC1-206ENST00000482632 FKTNO75072 461 aa11.89□□□□□ -0.51
SPTLC1-206ENST00000482632 PPARAQ07869 468 aa11.89□□□□□ -0.51
SPTLC1-206ENST00000482632 TMEM179Q6ZVK1 233 aa11.89□□□□□ -0.51
SPTLC1-206ENST00000482632 ZNF444Q8N0Y2 327 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1-206ENST00000482632 SMCR8Q8TEV9 937 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1-206ENST00000482632 ZNF296Q8WUU4 475 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1-206ENST00000482632 RUFY2Q8WXA3 655 aa11.89□□□□□ -0.51
SPTLC1-206ENST00000482632 PARK7Q99497 189 aaKnown RBP11.89□□□□□ -0.51
SPTLC1-206ENST00000482632 ZNF287Q9HBT7 754 aa11.89□□□□□ -0.51
SPTLC1-206ENST00000482632 ZSWIM8A7E2V4 1837 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 LAMA4Q16363 1823 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 CYP2C8P10632 490 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 HSPD1P10809 573 aaKnown RBP11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 BACE1P56817 501 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 HAND2P61296 217 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 IRX3P78415 501 aaPredicted RBP11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 ICA1Q05084 483 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 PDE4BQ07343 736 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 PABPC4Q13310 644 aaKnown RBP eCLIP11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 MFSD10Q14728 455 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 RRP12Q5JTH9 1297 aaKnown RBP11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 TREML2Q5T2D2 321 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 GPAT2Q6NUI2 795 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 USP17L2Q6R6M4 530 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 TICAM2Q86XR7 235 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 PROCA1Q8NCQ7 364 aaPredicted RBP11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 KCNV2Q8TDN2 545 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 ACER1Q8TDN7 264 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 CCDC17Q96LX7 622 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 LARP6Q9BRS8 491 aaKnown RBP11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 WDR18Q9BV38 432 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 ARHGEF10LQ9HCE6 1279 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 CPA4Q9UI42 421 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 AGTPBP1Q9UPW5 1226 aa11.88□□□□□ -0.51
SPTLC1-206ENST00000482632 MGAMO43451 1857 aa11.87□□□□□ -0.51
SPTLC1-206ENST00000482632 C19orf81C9J6K1 198 aa11.87□□□□□ -0.51
SPTLC1-206ENST00000482632 TSPY3P0CV98 308 aa11.87□□□□□ -0.51
SPTLC1-206ENST00000482632 TSPY8P0CW00 308 aa11.87□□□□□ -0.51
SPTLC1-206ENST00000482632 RASA1P20936 1047 aa11.87□□□□□ -0.51
SPTLC1-206ENST00000482632 OSBPP22059 807 aa11.87□□□□□ -0.51
SPTLC1-206ENST00000482632 USP14P54578 494 aa11.87□□□□□ -0.51
SPTLC1-206ENST00000482632 MOGSQ13724 837 aa11.87□□□□□ -0.51
SPTLC1-206ENST00000482632 FAM47AQ5JRC9 791 aa11.87□□□□□ -0.51
SPTLC1-206ENST00000482632 CD99L2Q8TCZ2 262 aa11.87□□□□□ -0.51
SPTLC1-206ENST00000482632 ZCCHC17Q9NP64 241 aaKnown RBP11.87□□□□□ -0.51
SPTLC1-206ENST00000482632 PNMA3Q9UL41 463 aa11.87□□□□□ -0.51
SPTLC1-206ENST00000482632 ISY1Q9ULR0 285 aaKnown RBP11.87□□□□□ -0.51
SPTLC1-206ENST00000482632 BOLA1Q9Y3E2 137 aa11.87□□□□□ -0.51
SPTLC1-206ENST00000482632 ROBO3Q96MS0 1386 aa11.87□□□□□ -0.51
SPTLC1-206ENST00000482632 FOXP2O15409 715 aa11.86□□□□□ -0.51
SPTLC1-206ENST00000482632 RANBP6O60518 1105 aaKnown RBP11.86□□□□□ -0.51
SPTLC1-206ENST00000482632 FGAP02671 866 aa11.86□□□□□ -0.51
SPTLC1-206ENST00000482632 CHMLP26374 656 aa11.86□□□□□ -0.51
SPTLC1-206ENST00000482632 GUCY1A2P33402 732 aa11.86□□□□□ -0.51
SPTLC1-206ENST00000482632 SP3Q02447 781 aa11.86□□□□□ -0.51
SPTLC1-206ENST00000482632 KIF22Q14807 665 aa11.86□□□□□ -0.51
SPTLC1-206ENST00000482632 ERO1AQ96HE7 468 aa11.86□□□□□ -0.51
SPTLC1-206ENST00000482632 SH2D4AQ9H788 454 aa11.86□□□□□ -0.51
SPTLC1-206ENST00000482632 GREB1LQ9C091 1923 aaPredicted RBP11.86□□□□□ -0.51
SPTLC1-206ENST00000482632 TSPY2A6NKD2 308 aa11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 TLR2O60603 784 aa11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 ALX1Q15699 326 aa11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 E2F4Q16254 413 aa11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 SH3D19Q5HYK7 790 aa11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 CTU1Q7Z7A3 348 aaKnown RBP11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 SPICE1Q8N0Z3 855 aa11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 CHMP4CQ96CF2 233 aa11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 DDX27Q96GQ7 796 aaKnown RBP11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 TMEM121BQ9BXQ6 578 aaPredicted RBP11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 CFHR5Q9BXR6 569 aa11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 TANGO6Q9C0B7 1094 aa11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 KANSL2Q9H9L4 492 aa11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 INCENPQ9NQS7 918 aa11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 EMILIN3Q9NT22 766 aa11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 TRIM17Q9Y577 477 aa11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 RAD50Q92878 1312 aa11.85□□□□□ -0.51
SPTLC1-206ENST00000482632 ZNF213O14771 459 aa11.84□□□□□ -0.51
SPTLC1-206ENST00000482632 EEF2P13639 858 aaKnown RBP11.84□□□□□ -0.51
SPTLC1-206ENST00000482632 TFAP4Q01664 338 aa11.84□□□□□ -0.51
SPTLC1-206ENST00000482632 ERICH6BQ5W0A0 696 aa11.84□□□□□ -0.51
SPTLC1-206ENST00000482632 CASC1Q6TDU7 716 aa11.84□□□□□ -0.51
SPTLC1-206ENST00000482632 ANKRD13CQ8N6S4 541 aa11.84□□□□□ -0.51
SPTLC1-206ENST00000482632 PAGR1Q9BTK6 254 aa11.84□□□□□ -0.51
SPTLC1-206ENST00000482632 MCOLN1Q9GZU1 580 aa11.84□□□□□ -0.51
SPTLC1-206ENST00000482632 KIAA1683Q9H0B3 1180 aa11.84□□□□□ -0.51
SPTLC1-206ENST00000482632 ASCC2Q9H1I8 757 aaPredicted RBP11.84□□□□□ -0.51
SPTLC1-206ENST00000482632 IL25Q9H293 177 aa11.84□□□□□ -0.51
SPTLC1-206ENST00000482632 RPAP3Q9H6T3 665 aaPredicted RBP11.84□□□□□ -0.51
SPTLC1-206ENST00000482632 GOPCQ9HD26 462 aa11.84□□□□□ -0.51
SPTLC1-206ENST00000482632 MTMR7Q9Y216 660 aa11.84□□□□□ -0.51
SPTLC1-206ENST00000482632 SLC45A1Q9Y2W3 748 aa11.84□□□□□ -0.51
SPTLC1-206ENST00000482632 A0A1W2PRG0 241 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 USP17L15C9J2P7 530 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 USP17L13C9JLJ4 530 aa11.83□□□□□ -0.52
SPTLC1-206ENST00000482632 USP17L11C9JVI0 530 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms