RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 GYPCP04921 128 aa14.31□□□□□ -0.12
VPS52-218ENST00000482399 SSBP05455 408 aaKnown RBP eCLIP14.31□□□□□ -0.12
VPS52-218ENST00000482399 COPB1P53618 953 aaKnown RBP14.31□□□□□ -0.12
VPS52-218ENST00000482399 CTSWP56202 376 aa14.31□□□□□ -0.12
VPS52-218ENST00000482399 EARS2Q5JPH6 523 aaKnown RBP14.31□□□□□ -0.12
VPS52-218ENST00000482399 ANKZF1Q9H8Y5 726 aa14.31□□□□□ -0.12
VPS52-218ENST00000482399 FAM217BQ9NTX9 383 aaPredicted RBP14.31□□□□□ -0.12
VPS52-218ENST00000482399 KDM6AO15550 1401 aaPredicted RBP14.31□□□□□ -0.12
VPS52-218ENST00000482399 TSPY2A6NKD2 308 aa14.31□□□□□ -0.12
VPS52-218ENST00000482399 ARID5AQ03989 594 aa14.31□□□□□ -0.12
VPS52-218ENST00000482399 E2F4Q16254 413 aa14.31□□□□□ -0.12
VPS52-218ENST00000482399 NTRK3Q16288 839 aa14.31□□□□□ -0.12
VPS52-218ENST00000482399 SND1Q7KZF4 910 aaKnown RBP eCLIP14.31□□□□□ -0.12
VPS52-218ENST00000482399 RSRC2Q7L4I2 434 aaKnown RBP14.31□□□□□ -0.12
VPS52-218ENST00000482399 A0A087X0B3 334 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 CCDC194A0A1B0GVG4 234 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 ERCC5P28715 1186 aaPredicted RBP14.3□□□□□ -0.12
VPS52-218ENST00000482399 LIG3P49916 1009 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 TBC1D8BQ0IIM8 1120 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 UBE3CQ15386 1083 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 PUM3Q15397 648 aaKnown RBP14.3□□□□□ -0.12
VPS52-218ENST00000482399 PTPROQ16827 1216 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 GPKOWQ92917 476 aaPredicted RBP eCLIP14.3□□□□□ -0.12
VPS52-218ENST00000482399 SAR1BQ9Y6B6 198 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 NWD1Q149M9 1564 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 ZNF185O15231 689 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 AKR1B10O60218 316 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 PPARAQ07869 468 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 SF3A3Q12874 501 aaKnown RBP eCLIP14.3□□□□□ -0.121e-6■■□□□ 13.6
VPS52-218ENST00000482399 TDRD12Q587J7 1177 aaKnown RBP14.3□□□□□ -0.12
VPS52-218ENST00000482399 BEND6Q5SZJ8 279 aaPredicted RBP14.3□□□□□ -0.12
VPS52-218ENST00000482399 PANX2Q96RD6 677 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 FOXP1Q9H334 677 aaPredicted RBP14.3□□□□□ -0.12
VPS52-218ENST00000482399 MMRN2Q9H8L6 949 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 CPDO75976 1380 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 A0A1B0GTH6 734 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 ACTN4O43707 911 aaKnown RBP14.3□□□□□ -0.12
VPS52-218ENST00000482399 MYO1BO43795 1136 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 NMT2O60551 498 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 SLC7A5Q01650 507 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 LRP10Q7Z4F1 713 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 DZIP3Q86Y13 1208 aaKnown RBP14.3□□□□□ -0.12
VPS52-218ENST00000482399 JAKMIP2Q96AA8 810 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 ABHD10Q9NUJ1 306 aa14.3□□□□□ -0.12
VPS52-218ENST00000482399 CACNA1FO60840 1977 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 MAGEB6P1A0A0J9YX57 407 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 PP2D1A8MPX8 630 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 PCCAP05165 728 aaPredicted RBP14.29□□□□□ -0.12
VPS52-218ENST00000482399 GYG1P46976 350 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 CCT5P48643 541 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 C2orf54Q08AI8 447 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 CCDC24Q8N4L8 307 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 IPO4Q8TEX9 1081 aaKnown RBP14.29□□□□□ -0.12
VPS52-218ENST00000482399 LPIN2Q92539 896 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 ZHX3Q9H4I2 956 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 ADD3Q9UEY8 706 aaKnown RBP14.29□□□□□ -0.12
VPS52-218ENST00000482399 STX8Q9UNK0 236 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 SOS2Q07890 1332 aaPredicted RBP14.29□□□□□ -0.12
VPS52-218ENST00000482399 B4DLN1 442 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 KRT86O43790 486 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 DYNLL1P63167 89 aaKnown RBP14.29□□□□□ -0.12
VPS52-218ENST00000482399 KCTD16Q68DU8 428 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 SRLQ86TD4 932 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 TMTC2Q8N394 836 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 TRIML1Q8N9V2 468 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 IFT81Q8WYA0 676 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 CCDC47Q96A33 483 aaKnown RBP14.29□□□□□ -0.12
VPS52-218ENST00000482399 CCDC42Q96M95 316 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 KCND1Q9NSA2 647 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 RGPD1P0DJD0 1748 aa14.29□□□□□ -0.12
VPS52-218ENST00000482399 LRRIQ3A6PVS8 624 aaPredicted RBP14.28□□□□□ -0.12
VPS52-218ENST00000482399 ZNF18P17022 549 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 ATP1A2P50993 1020 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 ERVK-24P63145 666 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 SPAG1Q07617 926 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 KIF5AQ12840 1032 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 HEATR3Q7Z4Q2 680 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 OR8K1Q8NGG5 319 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 MED15Q96RN5 788 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 NAA15Q9BXJ9 866 aaKnown RBP14.28□□□□□ -0.12
VPS52-218ENST00000482399 FAM207AQ9NSI2 230 aaPredicted RBP14.28□□□□□ -0.12
VPS52-218ENST00000482399 SAMM50Q9Y512 469 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 GSG1L2A8MUP6 293 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 ATP1A1P05023 1023 aaKnown RBP14.28□□□□□ -0.12
VPS52-218ENST00000482399 IL2RBP14784 551 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 LIFRP42702 1097 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 ATP2B2Q01814 1243 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 SMCR8Q8TEV9 937 aaPredicted RBP14.28□□□□□ -0.12
VPS52-218ENST00000482399 ZBTB1Q9Y2K1 713 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 TTC26A0AVF1 554 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 GOLGA6CA6NDK9 693 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 USP17L12C9JPN9 530 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 USP17L21D6R901 530 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 RNF225M0QZC1 329 aaPredicted RBP14.28□□□□□ -0.12
VPS52-218ENST00000482399 NDUFA10O95299 355 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 GOLGA6DP0CG33 693 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 AGLP35573 1532 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 MNAT1P51948 309 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 ASIC1P78348 528 aa14.28□□□□□ -0.12
VPS52-218ENST00000482399 TBX2Q13207 712 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms