RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 NAPBQ9H115 298 aa23.75■■□□□ 1.39
MSH5-215ENST00000482280 VCPKMTQ9H867 229 aa23.75■■□□□ 1.39
MSH5-215ENST00000482280 BAZ2AQ9UIF9 1905 aaKnown RBP23.74■■□□□ 1.39
MSH5-215ENST00000482280 PEX10O60683 326 aa23.74■■□□□ 1.39
MSH5-215ENST00000482280 TFRCP02786 760 aaKnown RBP23.74■■□□□ 1.39
MSH5-215ENST00000482280 EEF2P13639 858 aaKnown RBP23.74■■□□□ 1.39
MSH5-215ENST00000482280 Q3C1V9 767 aa23.74■■□□□ 1.39
MSH5-215ENST00000482280 B4GALNT3Q6L9W6 998 aa23.74■■□□□ 1.39
MSH5-215ENST00000482280 SAMD1Q6SPF0 538 aaPredicted RBP23.74■■□□□ 1.39
MSH5-215ENST00000482280 LBX2Q6XYB7 198 aa23.74■■□□□ 1.39
MSH5-215ENST00000482280 SPICE1Q8N0Z3 855 aa23.74■■□□□ 1.39
MSH5-215ENST00000482280 PORCNQ9H237 461 aa23.74■■□□□ 1.39
MSH5-215ENST00000482280 GJD2Q9UKL4 321 aa23.74■■□□□ 1.39
MSH5-215ENST00000482280 SPDYE16A6NNV3 312 aaPredicted RBP23.73■■□□□ 1.39
MSH5-215ENST00000482280 WDR46O15213 610 aaKnown RBP23.73■■□□□ 1.39
MSH5-215ENST00000482280 FLOT1O75955 427 aa23.73■■□□□ 1.39
MSH5-215ENST00000482280 ZKSCAN1P17029 563 aaPredicted RBP23.73■■□□□ 1.39
MSH5-215ENST00000482280 PDE1AP54750 535 aa23.73■■□□□ 1.39
MSH5-215ENST00000482280 PDE4BQ07343 736 aa23.73■■□□□ 1.39
MSH5-215ENST00000482280 ZMYM1Q5SVZ6 1142 aa23.73■■□□□ 1.39
MSH5-215ENST00000482280 CLEC10AQ8IUN9 316 aa23.73■■□□□ 1.39
MSH5-215ENST00000482280 IFNL3Q8IZI9 196 aa23.73■■□□□ 1.39
MSH5-215ENST00000482280 MB21D1Q8N884 522 aa23.73■■□□□ 1.39
MSH5-215ENST00000482280 DEFB118Q96PH6 123 aa23.73■■□□□ 1.39
MSH5-215ENST00000482280 LNPKQ9C0E8 428 aa23.73■■□□□ 1.39
MSH5-215ENST00000482280 HMX1Q9NP08 348 aaPredicted RBP23.73■■□□□ 1.39
MSH5-215ENST00000482280 STAP2Q9UGK3 403 aa23.73■■□□□ 1.39
MSH5-215ENST00000482280 MYH8P13535 1937 aa23.72■■□□□ 1.39
MSH5-215ENST00000482280 TRIM6-TRIM34B2RNG4 842 aa23.72■■□□□ 1.39
MSH5-215ENST00000482280 SGPL1O95470 568 aa23.72■■□□□ 1.39
MSH5-215ENST00000482280 XRCC5P13010 732 aaKnown RBP23.72■■□□□ 1.39
MSH5-215ENST00000482280 SEC62Q99442 399 aaKnown RBP23.72■■□□□ 1.39
MSH5-215ENST00000482280 ROBO3Q96MS0 1386 aa23.71■■□□□ 1.39
MSH5-215ENST00000482280 SMIM22K7EJ46 135 aa23.71■■□□□ 1.39
MSH5-215ENST00000482280 PLS1Q14651 629 aa23.71■■□□□ 1.39
MSH5-215ENST00000482280 EXOC6Q8TAG9 804 aa23.71■■□□□ 1.39
MSH5-215ENST00000482280 APBA2Q99767 749 aa23.71■■□□□ 1.39
MSH5-215ENST00000482280 HTATIP2Q9BUP3 242 aa23.71■■□□□ 1.39
MSH5-215ENST00000482280 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.71■■□□□ 1.39
MSH5-215ENST00000482280 KIAA0100Q14667 2235 aaKnown RBP23.71■■□□□ 1.39
MSH5-215ENST00000482280 RPTORQ8N122 1335 aa23.7■■□□□ 1.38
MSH5-215ENST00000482280 SALL3Q9BXA9 1300 aa23.7■■□□□ 1.38
MSH5-215ENST00000482280 EPB41L4AQ9HCS5 686 aaPredicted RBP23.7■■□□□ 1.38
MSH5-215ENST00000482280 SLC15A5A6NIM6 579 aa23.69■■□□□ 1.38
MSH5-215ENST00000482280 CNMDO75829 334 aa23.69■■□□□ 1.38
MSH5-215ENST00000482280 FARP2O94887 1054 aaPredicted RBP23.69■■□□□ 1.38
MSH5-215ENST00000482280 RASA1P20936 1047 aa23.69■■□□□ 1.38
MSH5-215ENST00000482280 DPF3Q92784 378 aa23.69■■□□□ 1.38
MSH5-215ENST00000482280 SHISA4Q96DD7 197 aa23.69■■□□□ 1.38
MSH5-215ENST00000482280 BTBD7Q9P203 1132 aa23.69■■□□□ 1.38
MSH5-215ENST00000482280 SUPT16HQ9Y5B9 1047 aaKnown RBP23.69■■□□□ 1.38
MSH5-215ENST00000482280 TSPY3P0CV98 308 aa23.68■■□□□ 1.38
MSH5-215ENST00000482280 TSPY8P0CW00 308 aa23.68■■□□□ 1.38
MSH5-215ENST00000482280 MAP2K5Q13163 448 aa23.68■■□□□ 1.38
MSH5-215ENST00000482280 MORN1Q5T089 497 aa23.68■■□□□ 1.38
MSH5-215ENST00000482280 CHD1LQ86WJ1 897 aa23.68■■□□□ 1.38
MSH5-215ENST00000482280 TICAM2Q86XR7 235 aa23.68■■□□□ 1.38
MSH5-215ENST00000482280 SIAH1Q8IUQ4 282 aa23.68■■□□□ 1.38
MSH5-215ENST00000482280 SMC5Q8IY18 1101 aa23.68■■□□□ 1.38
MSH5-215ENST00000482280 TRIB2Q92519 343 aa23.68■■□□□ 1.38
MSH5-215ENST00000482280 RILPL2Q969X0 211 aa23.68■■□□□ 1.38
MSH5-215ENST00000482280 PAK6Q9NQU5 681 aaPredicted RBP23.68■■□□□ 1.38
MSH5-215ENST00000482280 HELLSQ9NRZ9 838 aa23.68■■□□□ 1.38
MSH5-215ENST00000482280 PRDM1O75626 825 aa23.67■■□□□ 1.38
MSH5-215ENST00000482280 PRKAR2AP13861 404 aaKnown RBP23.67■■□□□ 1.38
MSH5-215ENST00000482280 PTPREP23469 700 aa23.67■■□□□ 1.38
MSH5-215ENST00000482280 DSG3P32926 999 aa23.67■■□□□ 1.38
MSH5-215ENST00000482280 PPARAQ07869 468 aa23.67■■□□□ 1.38
MSH5-215ENST00000482280 MFSD14CQ5VZR4 134 aa23.67■■□□□ 1.38
MSH5-215ENST00000482280 SPATC1LQ9H0A9 340 aa23.67■■□□□ 1.38
MSH5-215ENST00000482280 SLC5A4Q9NY91 659 aa23.67■■□□□ 1.38
MSH5-215ENST00000482280 NYAP2Q9P242 653 aa23.67■■□□□ 1.38
MSH5-215ENST00000482280 TNRC18O15417 2968 aaPredicted RBP23.67■■□□□ 1.38
MSH5-215ENST00000482280 STRNO43815 780 aa23.66■■□□□ 1.38
MSH5-215ENST00000482280 PPP4R3BQ5MIZ7 849 aa23.66■■□□□ 1.38
MSH5-215ENST00000482280 DPP9Q86TI2 863 aa23.66■■□□□ 1.38
MSH5-215ENST00000482280 MROH8Q9H579 483 aa23.66■■□□□ 1.38
MSH5-215ENST00000482280 CLIP2Q9UDT6 1046 aa23.66■■□□□ 1.38
MSH5-215ENST00000482280 CTDP1Q9Y5B0 961 aaPredicted RBP23.66■■□□□ 1.38
MSH5-215ENST00000482280 PDE4DIPQ5VU43 2346 aa23.66■■□□□ 1.38
MSH5-215ENST00000482280 KIAA1755Q5JYT7 1200 aa23.65■■□□□ 1.38
MSH5-215ENST00000482280 POTEEQ6S8J3 1075 aa23.65■■□□□ 1.38
MSH5-215ENST00000482280 NCAPG2Q86XI2 1143 aa23.65■■□□□ 1.38
MSH5-215ENST00000482280 SHCBP1Q8NEM2 672 aa23.65■■□□□ 1.38
MSH5-215ENST00000482280 ATG4CQ96DT6 458 aa23.65■■□□□ 1.38
MSH5-215ENST00000482280 MOV10L1Q9BXT6 1211 aaKnown RBP23.65■■□□□ 1.38
MSH5-215ENST00000482280 CENPFP49454 3210 aa23.65■■□□□ 1.38
MSH5-215ENST00000482280 MFAP1P55081 439 aaKnown RBP23.64■■□□□ 1.37
MSH5-215ENST00000482280 NUCB1Q02818 461 aa23.64■■□□□ 1.37
MSH5-215ENST00000482280 MCMDC2Q4G0Z9 681 aa23.64■■□□□ 1.37
MSH5-215ENST00000482280 FAM83BQ5T0W9 1011 aa23.64■■□□□ 1.37
MSH5-215ENST00000482280 CCDC129Q6ZRS4 1044 aa23.64■■□□□ 1.37
MSH5-215ENST00000482280 USP6NLQ92738 828 aa23.64■■□□□ 1.37
MSH5-215ENST00000482280 ISY1Q9ULR0 285 aaKnown RBP23.64■■□□□ 1.37
MSH5-215ENST00000482280 SLC25A27O95847 323 aa23.63■■□□□ 1.37
MSH5-215ENST00000482280 TTLL1O95922 423 aa23.63■■□□□ 1.37
MSH5-215ENST00000482280 ERCC3P19447 782 aa23.63■■□□□ 1.37
MSH5-215ENST00000482280 TRIM32Q13049 653 aa23.63■■□□□ 1.37
MSH5-215ENST00000482280 GRB14Q14449 540 aa23.63■■□□□ 1.37
MSH5-215ENST00000482280 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms