RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 RNF141Q8WVD5 230 aa8.72□□□□□ -1.01
SF3B1-210ENST00000482158 FBXL18Q96ME1 805 aa8.72□□□□□ -1.01
SF3B1-210ENST00000482158 DEPDC7Q96QD5 511 aa8.72□□□□□ -1.01
SF3B1-210ENST00000482158 FAM86C1Q9NVL1 165 aa8.72□□□□□ -1.01
SF3B1-210ENST00000482158 SUSD2Q9UGT4 822 aa8.72□□□□□ -1.01
SF3B1-210ENST00000482158 SHOXO15266 292 aa8.71□□□□□ -1.02
SF3B1-210ENST00000482158 FSTP19883 344 aa8.71□□□□□ -1.02
SF3B1-210ENST00000482158 NCAPHQ15003 741 aa8.71□□□□□ -1.02
SF3B1-210ENST00000482158 GIMAP6Q6P9H5 292 aa8.71□□□□□ -1.02
SF3B1-210ENST00000482158 LRP10Q7Z4F1 713 aa8.71□□□□□ -1.02
SF3B1-210ENST00000482158 GIMAP7Q8NHV1 300 aa8.71□□□□□ -1.02
SF3B1-210ENST00000482158 Q96M66 194 aa8.71□□□□□ -1.02
SF3B1-210ENST00000482158 SRPK1Q96SB4 655 aaKnown RBP8.71□□□□□ -1.02
SF3B1-210ENST00000482158 DBNDD2Q9BQY9 259 aa8.71□□□□□ -1.02
SF3B1-210ENST00000482158 TPX2Q9ULW0 747 aaKnown RBP8.71□□□□□ -1.02
SF3B1-210ENST00000482158 CCDC85CA6NKD9 419 aa8.7□□□□□ -1.02
SF3B1-210ENST00000482158 PRR33A8MZF0 331 aa8.7□□□□□ -1.02
SF3B1-210ENST00000482158 MSTNO14793 375 aa8.7□□□□□ -1.02
SF3B1-210ENST00000482158 CBFA2T2O43439 604 aa8.7□□□□□ -1.02
SF3B1-210ENST00000482158 IGLV1-40P01703 118 aa8.7□□□□□ -1.02
SF3B1-210ENST00000482158 TP53P04637 393 aaPredicted RBP8.7□□□□□ -1.02
SF3B1-210ENST00000482158 NFE2L2Q16236 605 aa8.7□□□□□ -1.02
SF3B1-210ENST00000482158 BBS9Q3SYG4 887 aa8.7□□□□□ -1.02
SF3B1-210ENST00000482158 ASPNQ9BXN1 380 aa8.7□□□□□ -1.02
SF3B1-210ENST00000482158 PRDM5Q9NQX1 630 aaPredicted RBP8.7□□□□□ -1.02
SF3B1-210ENST00000482158 IGF2BP3O00425 579 aaKnown RBP eCLIP8.69□□□□□ -1.02
SF3B1-210ENST00000482158 PDPK1O15530 556 aa8.69□□□□□ -1.02
SF3B1-210ENST00000482158 DYRK3O43781 588 aa8.69□□□□□ -1.02
SF3B1-210ENST00000482158 RASGRF1Q13972 1273 aa8.69□□□□□ -1.02
SF3B1-210ENST00000482158 NBPF9Q3BBW0 867 aa8.69□□□□□ -1.02
SF3B1-210ENST00000482158 DCAF15Q66K64 600 aa8.69□□□□□ -1.02
SF3B1-210ENST00000482158 GPAT2Q6NUI2 795 aa8.69□□□□□ -1.02
SF3B1-210ENST00000482158 ZNF746Q6NUN9 644 aaPredicted RBP8.69□□□□□ -1.02
SF3B1-210ENST00000482158 NOP9Q86U38 636 aaKnown RBP8.69□□□□□ -1.02
SF3B1-210ENST00000482158 SHKBP1Q8TBC3 707 aa8.69□□□□□ -1.02
SF3B1-210ENST00000482158 SMARCC1Q92922 1105 aaPredicted RBP8.69□□□□□ -1.02
SF3B1-210ENST00000482158 RNF4P78317 190 aa8.68□□□□□ -1.02
SF3B1-210ENST00000482158 ANKRD39Q53RE8 183 aa8.68□□□□□ -1.02
SF3B1-210ENST00000482158 SFRP5Q5T4F7 317 aa8.68□□□□□ -1.02
SF3B1-210ENST00000482158 C22orf34Q6ZV56 151 aa8.68□□□□□ -1.02
SF3B1-210ENST00000482158 ZNF513Q8N8E2 541 aaPredicted RBP8.68□□□□□ -1.02
SF3B1-210ENST00000482158 HAUS7Q99871 368 aa8.68□□□□□ -1.02
SF3B1-210ENST00000482158 MKRN2Q9H000 416 aaKnown RBP8.68□□□□□ -1.02
SF3B1-210ENST00000482158 KLHL25Q9H0H3 589 aa8.68□□□□□ -1.02
SF3B1-210ENST00000482158 WDR64B1ANS9 1081 aa8.67□□□□□ -1.02
SF3B1-210ENST00000482158 SUSD5O60279 629 aa8.67□□□□□ -1.02
SF3B1-210ENST00000482158 EPHX1P07099 455 aa8.67□□□□□ -1.02
SF3B1-210ENST00000482158 ZNF865P0CJ78 1059 aaPredicted RBP8.67□□□□□ -1.02
SF3B1-210ENST00000482158 CYP7A1P22680 504 aa8.67□□□□□ -1.02
SF3B1-210ENST00000482158 CYP27A1Q02318 531 aa8.67□□□□□ -1.02
SF3B1-210ENST00000482158 SNW1Q13573 536 aaKnown RBP8.67□□□□□ -1.02
SF3B1-210ENST00000482158 AUHQ13825 339 aaKnown RBP8.67□□□□□ -1.02
SF3B1-210ENST00000482158 CYP27C1Q4G0S4 372 aa8.67□□□□□ -1.02
SF3B1-210ENST00000482158 CCDC144CPQ8IYA2 1237 aa8.67□□□□□ -1.02
SF3B1-210ENST00000482158 ZNF451Q9Y4E5 1061 aa8.67□□□□□ -1.02
SF3B1-210ENST00000482158 PRR19A6NJB7 356 aa8.66□□□□□ -1.02
SF3B1-210ENST00000482158 CBX7O95931 251 aa8.66□□□□□ -1.02
SF3B1-210ENST00000482158 OXCT1P55809 520 aa8.66□□□□□ -1.02
SF3B1-210ENST00000482158 SPATC1Q76KD6 591 aa8.66□□□□□ -1.02
SF3B1-210ENST00000482158 ZDHHC13Q8IUH4 622 aa8.66□□□□□ -1.02
SF3B1-210ENST00000482158 C7orf61Q8IZ16 206 aa8.66□□□□□ -1.02
SF3B1-210ENST00000482158 DTWD2Q8NBA8 298 aa8.66□□□□□ -1.02
SF3B1-210ENST00000482158 MRFAP1L1Q96HT8 127 aa8.66□□□□□ -1.02
SF3B1-210ENST00000482158 COX4I2Q96KJ9 171 aa8.66□□□□□ -1.02
SF3B1-210ENST00000482158 DNAJC7Q99615 494 aa8.66□□□□□ -1.02
SF3B1-210ENST00000482158 GTF2IRD1Q9UHL9 959 aa8.66□□□□□ -1.02
SF3B1-210ENST00000482158 CAPN6Q9Y6Q1 641 aa8.66□□□□□ -1.02
SF3B1-210ENST00000482158 GSC2O15499 205 aa8.65□□□□□ -1.02
SF3B1-210ENST00000482158 KIR3DL1P43629 444 aa8.65□□□□□ -1.02
SF3B1-210ENST00000482158 TNK2Q07912 1038 aa8.65□□□□□ -1.02
SF3B1-210ENST00000482158 SLC10A6Q3KNW5 377 aa8.65□□□□□ -1.02
SF3B1-210ENST00000482158 DUSP27Q5VZP5 1158 aa8.65□□□□□ -1.02
SF3B1-210ENST00000482158 EEPD1Q7L9B9 569 aa8.65□□□□□ -1.02
SF3B1-210ENST00000482158 JAZF1Q86VZ6 243 aa8.65□□□□□ -1.02
SF3B1-210ENST00000482158 LILRB2Q8N423 598 aa8.65□□□□□ -1.02
SF3B1-210ENST00000482158 FAM181AQ8N9Y4 354 aa8.65□□□□□ -1.02
SF3B1-210ENST00000482158 ST13P5Q8NFI4 369 aaPredicted RBP8.65□□□□□ -1.02
SF3B1-210ENST00000482158 PRDM14Q9GZV8 571 aa8.65□□□□□ -1.02
SF3B1-210ENST00000482158 TBX22Q9Y458 520 aa8.65□□□□□ -1.02
SF3B1-210ENST00000482158 ANKRD34BA5PLL1 514 aa8.64□□□□□ -1.03
SF3B1-210ENST00000482158 CD247P20963 164 aa8.64□□□□□ -1.03
SF3B1-210ENST00000482158 CHMP4BP1P59074 171 aa8.64□□□□□ -1.03
SF3B1-210ENST00000482158 NKPD1Q17RQ9 610 aa8.64□□□□□ -1.03
SF3B1-210ENST00000482158 HEATR6Q6AI08 1181 aaKnown RBP8.64□□□□□ -1.03
SF3B1-210ENST00000482158 FGD4Q96M96 766 aa8.64□□□□□ -1.03
SF3B1-210ENST00000482158 OSBPL1AQ9BXW6 950 aa8.64□□□□□ -1.03
SF3B1-210ENST00000482158 GP6Q9HCN6 339 aa8.64□□□□□ -1.03
SF3B1-210ENST00000482158 ATG3Q9NT62 314 aa8.64□□□□□ -1.03
SF3B1-210ENST00000482158 APEX2Q9UBZ4 518 aa8.64□□□□□ -1.03
SF3B1-210ENST00000482158 PLAGL2Q9UPG8 496 aa8.64□□□□□ -1.03
SF3B1-210ENST00000482158 DIAPH1O60610 1272 aaKnown RBP8.63□□□□□ -1.03
SF3B1-210ENST00000482158 IGHA1P01876 353 aa8.63□□□□□ -1.03
SF3B1-210ENST00000482158 ZNF143P52747 638 aaPredicted RBP8.63□□□□□ -1.03
SF3B1-210ENST00000482158 TMC3Q7Z5M5 1100 aa8.63□□□□□ -1.03
SF3B1-210ENST00000482158 METTL22Q9BUU2 404 aaPredicted RBP8.63□□□□□ -1.03
SF3B1-210ENST00000482158 ZMYM5Q9UJ78 669 aa8.63□□□□□ -1.03
SF3B1-210ENST00000482158 SHISA3A0PJX4 238 aa8.62□□□□□ -1.03
SF3B1-210ENST00000482158 FURINP09958 794 aa8.62□□□□□ -1.03
SF3B1-210ENST00000482158 ZNF445P59923 1031 aa8.62□□□□□ -1.03
SF3B1-210ENST00000482158 MTERF2Q49AM1 385 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms