RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 MYH1P12882 1939 aa16.62■□□□□ 0.25
CHD3-211ENST00000481999 FAM196BA6NMK8 535 aa16.62■□□□□ 0.25
CHD3-211ENST00000481999 KINO60870 393 aaKnown RBP16.62■□□□□ 0.25
CHD3-211ENST00000481999 PFKFB1P16118 471 aa16.62■□□□□ 0.25
CHD3-211ENST00000481999 NPY5RQ15761 445 aa16.62■□□□□ 0.25
CHD3-211ENST00000481999 SHROOM1Q2M3G4 852 aaPredicted RBP16.62■□□□□ 0.25
CHD3-211ENST00000481999 TMC4Q7Z404 712 aa16.62■□□□□ 0.25
CHD3-211ENST00000481999 EYA3Q99504 573 aa16.62■□□□□ 0.25
CHD3-211ENST00000481999 ZBTB22O15209 634 aa16.61■□□□□ 0.25
CHD3-211ENST00000481999 C21orf2O43822 256 aa16.61■□□□□ 0.25
CHD3-211ENST00000481999 DDAH1O94760 285 aa16.61■□□□□ 0.25
CHD3-211ENST00000481999 ZNF75DP51815 510 aa16.61■□□□□ 0.25
CHD3-211ENST00000481999 ISM2Q6H9L7 571 aa16.61■□□□□ 0.25
CHD3-211ENST00000481999 PLA2G4DQ86XP0 818 aa16.61■□□□□ 0.25
CHD3-211ENST00000481999 TMEM47Q9BQJ4 181 aa16.61■□□□□ 0.25
CHD3-211ENST00000481999 TRIM5Q9C035 493 aa16.61■□□□□ 0.25
CHD3-211ENST00000481999 ROBO3Q96MS0 1386 aa16.61■□□□□ 0.25
CHD3-211ENST00000481999 AMOTL1Q8IY63 956 aa16.61■□□□□ 0.25
CHD3-211ENST00000481999 WASF1Q92558 559 aa16.61■□□□□ 0.25
CHD3-211ENST00000481999 FAM163AQ96GL9 167 aaPredicted RBP16.61■□□□□ 0.25
CHD3-211ENST00000481999 PYCARDQ9ULZ3 195 aa16.61■□□□□ 0.25
CHD3-211ENST00000481999 BIN1O00499 593 aa16.6■□□□□ 0.25
CHD3-211ENST00000481999 PRPF3O43395 683 aaKnown RBP16.6■□□□□ 0.25
CHD3-211ENST00000481999 CYTH3O43739 400 aa16.6■□□□□ 0.25
CHD3-211ENST00000481999 RCAN1P53805 252 aa16.6■□□□□ 0.25
CHD3-211ENST00000481999 TCP10Q12799 353 aa16.6■□□□□ 0.25
CHD3-211ENST00000481999 SAFBQ15424 915 aaKnown RBP eCLIP16.6■□□□□ 0.25
CHD3-211ENST00000481999 TYW1BQ6NUM6 668 aa16.6■□□□□ 0.25
CHD3-211ENST00000481999 C16orf86Q6ZW13 317 aa16.6■□□□□ 0.25
CHD3-211ENST00000481999 CEP95Q96GE4 821 aa16.6■□□□□ 0.25
CHD3-211ENST00000481999 SDF4Q9BRK5 362 aa16.6■□□□□ 0.25
CHD3-211ENST00000481999 USP40Q9NVE5 1235 aa16.6■□□□□ 0.25
CHD3-211ENST00000481999 ZNF202O95125 648 aa16.6■□□□□ 0.25
CHD3-211ENST00000481999 APOBEC3HQ6NTF7 200 aaKnown RBP16.6■□□□□ 0.25
CHD3-211ENST00000481999 USP49Q70CQ1 688 aa16.6■□□□□ 0.25
CHD3-211ENST00000481999 RASGRP4Q8TDF6 673 aa16.6■□□□□ 0.25
CHD3-211ENST00000481999 PHF20Q9BVI0 1012 aa16.6■□□□□ 0.25
CHD3-211ENST00000481999 TMX4Q9H1E5 349 aaPredicted RBP16.6■□□□□ 0.25
CHD3-211ENST00000481999 MAD2L2Q9UI95 211 aa16.6■□□□□ 0.25
CHD3-211ENST00000481999 QSER1Q2KHR3 1735 aa16.59■□□□□ 0.25
CHD3-211ENST00000481999 ECE2O60344 883 aa16.59■□□□□ 0.25
CHD3-211ENST00000481999 PTGS1P23219 599 aa16.59■□□□□ 0.25
CHD3-211ENST00000481999 STX1AQ16623 288 aa16.59■□□□□ 0.25
CHD3-211ENST00000481999 CDC42EP5Q6NZY7 148 aa16.59■□□□□ 0.25
CHD3-211ENST00000481999 DRC7Q8IY82 874 aa16.59■□□□□ 0.25
CHD3-211ENST00000481999 GTF2F1P35269 517 aaKnown RBP eCLIP16.59■□□□□ 0.25
CHD3-211ENST00000481999 USP17L2Q6R6M4 530 aa16.59■□□□□ 0.25
CHD3-211ENST00000481999 RBM28Q9NW13 759 aaKnown RBP16.59■□□□□ 0.25
CHD3-211ENST00000481999 A0A1W2PQ27 194 aa16.58■□□□□ 0.25
CHD3-211ENST00000481999 A0A1W2PQ64 194 aa16.58■□□□□ 0.25
CHD3-211ENST00000481999 A0A1W2PQD8 194 aa16.58■□□□□ 0.25
CHD3-211ENST00000481999 RBM5P52756 815 aaKnown RBP eCLIP16.58■□□□□ 0.25
CHD3-211ENST00000481999 FOXP1Q9H334 677 aaPredicted RBP16.58■□□□□ 0.25
CHD3-211ENST00000481999 GOLGA6L19H0YKK7 550 aa16.58■□□□□ 0.24
CHD3-211ENST00000481999 FOXN1O15353 648 aa16.58■□□□□ 0.24
CHD3-211ENST00000481999 CALM1P0DP23 149 aa16.58■□□□□ 0.24
CHD3-211ENST00000481999 CALM2P0DP24 149 aa16.58■□□□□ 0.24
CHD3-211ENST00000481999 CALM3P0DP25 149 aa16.58■□□□□ 0.24
CHD3-211ENST00000481999 CCDC186Q7Z3E2 898 aa16.58■□□□□ 0.24
CHD3-211ENST00000481999 DGKHQ86XP1 1220 aa16.58■□□□□ 0.24
CHD3-211ENST00000481999 CDC25BP30305 580 aa16.57■□□□□ 0.24
CHD3-211ENST00000481999 LRRC47Q8N1G4 583 aaKnown RBP16.57■□□□□ 0.24
CHD3-211ENST00000481999 C7orf43Q8WVR3 580 aa16.57■□□□□ 0.24
CHD3-211ENST00000481999 SCG2P13521 617 aa16.57■□□□□ 0.24
CHD3-211ENST00000481999 AKR1B1P15121 316 aa16.57■□□□□ 0.24
CHD3-211ENST00000481999 PLCG2P16885 1265 aa16.57■□□□□ 0.24
CHD3-211ENST00000481999 CRKP46108 304 aa16.57■□□□□ 0.24
CHD3-211ENST00000481999 IQCB1Q15051 598 aa16.57■□□□□ 0.24
CHD3-211ENST00000481999 TMED8Q6PL24 325 aaPredicted RBP16.57■□□□□ 0.24
CHD3-211ENST00000481999 SARM1Q6SZW1 724 aa16.57■□□□□ 0.24
CHD3-211ENST00000481999 YDJCA8MPS7 323 aa16.56■□□□□ 0.24
CHD3-211ENST00000481999 CMA1P23946 247 aa16.56■□□□□ 0.24
CHD3-211ENST00000481999 HOMER1Q86YM7 354 aa16.56■□□□□ 0.24
CHD3-211ENST00000481999 SLF2Q8IX21 1173 aa16.56■□□□□ 0.24
CHD3-211ENST00000481999 PDILTQ8N807 584 aa16.56■□□□□ 0.24
CHD3-211ENST00000481999 TEKT1Q969V4 418 aa16.56■□□□□ 0.24
CHD3-211ENST00000481999 KRT2P35908 639 aa16.56■□□□□ 0.24
CHD3-211ENST00000481999 PPP2R5BQ15173 497 aa16.56■□□□□ 0.24
CHD3-211ENST00000481999 DPCR1Q3MIW9 517 aa16.56■□□□□ 0.24
CHD3-211ENST00000481999 DACT2Q5SW24 774 aa16.56■□□□□ 0.24
CHD3-211ENST00000481999 PIK3AP1Q6ZUJ8 805 aa16.56■□□□□ 0.24
CHD3-211ENST00000481999 VAT1LQ9HCJ6 419 aa16.56■□□□□ 0.24
CHD3-211ENST00000481999 ANO10Q9NW15 660 aa16.56■□□□□ 0.24
CHD3-211ENST00000481999 FRMPD2Q68DX3 1309 aaPredicted RBP16.55■□□□□ 0.24
CHD3-211ENST00000481999 ZBTB7AO95365 584 aa16.55■□□□□ 0.24
CHD3-211ENST00000481999 SYKP43405 635 aa16.55■□□□□ 0.24
CHD3-211ENST00000481999 ZNF174Q15697 407 aa16.55■□□□□ 0.24
CHD3-211ENST00000481999 LONRF3Q496Y0 759 aa16.55■□□□□ 0.24
CHD3-211ENST00000481999 STYK1Q6J9G0 422 aa16.55■□□□□ 0.24
CHD3-211ENST00000481999 PODNQ7Z5L7 613 aa16.55■□□□□ 0.24
CHD3-211ENST00000481999 UBA5Q9GZZ9 404 aa16.55■□□□□ 0.24
CHD3-211ENST00000481999 CLIP2Q9UDT6 1046 aa16.55■□□□□ 0.24
CHD3-211ENST00000481999 PPP6R2O75170 966 aa16.55■□□□□ 0.24
CHD3-211ENST00000481999 NLRP5P59047 1200 aa16.55■□□□□ 0.24
CHD3-211ENST00000481999 PNOCQ13519 176 aa16.55■□□□□ 0.24
CHD3-211ENST00000481999 PFKFB3Q16875 520 aaPredicted RBP16.55■□□□□ 0.24
CHD3-211ENST00000481999 TNFRSF25Q93038 417 aa16.55■□□□□ 0.24
CHD3-211ENST00000481999 FBXO2Q9UK22 296 aaPredicted RBP16.55■□□□□ 0.24
CHD3-211ENST00000481999 FOCADQ5VW36 1801 aa16.55■□□□□ 0.24
CHD3-211ENST00000481999 USP17L5A8MUK1 530 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms