RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 CTNND2Q9UQB3 1225 aa5.96□□□□□ -1.46
CBX3-207ENST00000481300 POLR3KQ9Y2Y1 108 aaPredicted RBP5.96□□□□□ -1.46
CBX3-207ENST00000481300 CORINQ9Y5Q5 1042 aa5.96□□□□□ -1.46
CBX3-207ENST00000481300 ATE1O95260 518 aa5.95□□□□□ -1.46
CBX3-207ENST00000481300 CST3P01034 146 aaPredicted RBP5.95□□□□□ -1.46
CBX3-207ENST00000481300 CLCQ05315 142 aa5.95□□□□□ -1.46
CBX3-207ENST00000481300 ZNF124Q15973 351 aa5.95□□□□□ -1.46
CBX3-207ENST00000481300 SFRP5Q5T4F7 317 aa5.95□□□□□ -1.46
CBX3-207ENST00000481300 CDKAL1Q5VV42 579 aa5.95□□□□□ -1.46
CBX3-207ENST00000481300 LETMD1Q6P1Q0 360 aa5.95□□□□□ -1.46
CBX3-207ENST00000481300 CCDC81Q6ZN84 652 aa5.95□□□□□ -1.46
CBX3-207ENST00000481300 MCF2L2Q86YR7 1114 aa5.95□□□□□ -1.46
CBX3-207ENST00000481300 MFSD4AQ8N468 514 aa5.95□□□□□ -1.46
CBX3-207ENST00000481300 SRRTQ9BXP5 876 aaKnown RBP5.95□□□□□ -1.46
CBX3-207ENST00000481300 EHMT1Q9H9B1 1298 aa5.95□□□□□ -1.46
CBX3-207ENST00000481300 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.95□□□□□ -1.46
CBX3-207ENST00000481300 LMCD1Q9NZU5 365 aa5.95□□□□□ -1.46
CBX3-207ENST00000481300 REV1Q9UBZ9 1251 aa5.95□□□□□ -1.46
CBX3-207ENST00000481300 ADAM30Q9UKF2 790 aa5.95□□□□□ -1.46
CBX3-207ENST00000481300 CAPN6Q9Y6Q1 641 aa5.95□□□□□ -1.46
CBX3-207ENST00000481300 PRR36Q9H6K5 1346 aa5.95□□□□□ -1.46
CBX3-207ENST00000481300 ZNF503-AS2A6NEH8 195 aa5.94□□□□□ -1.46
CBX3-207ENST00000481300 FAM155AB1AL88 458 aaPredicted RBP5.94□□□□□ -1.46
CBX3-207ENST00000481300 FGRP09769 529 aa5.94□□□□□ -1.46
CBX3-207ENST00000481300 GTF2F1P35269 517 aaKnown RBP eCLIP5.94□□□□□ -1.46
CBX3-207ENST00000481300 EIF6P56537 245 aaKnown RBP5.94□□□□□ -1.46
CBX3-207ENST00000481300 LRRFIP1Q32MZ4 808 aaKnown RBP5.94□□□□□ -1.46
CBX3-207ENST00000481300 FYB2Q5VWT5 728 aa5.94□□□□□ -1.46
CBX3-207ENST00000481300 ZSWIM9Q86XI8 627 aa5.94□□□□□ -1.46
CBX3-207ENST00000481300 XAGE3Q8WTP9 111 aa5.94□□□□□ -1.46
CBX3-207ENST00000481300 ANAPC16Q96DE5 110 aa5.94□□□□□ -1.46
CBX3-207ENST00000481300 CARS2Q9HA77 564 aaKnown RBP5.94□□□□□ -1.46
CBX3-207ENST00000481300 C19orf73Q9NVV2 129 aa5.94□□□□□ -1.46
CBX3-207ENST00000481300 KLHL3Q9UH77 587 aa5.94□□□□□ -1.46
CBX3-207ENST00000481300 ZNRF3Q9ULT6 936 aa5.94□□□□□ -1.46
CBX3-207ENST00000481300 ST14Q9Y5Y6 855 aa5.94□□□□□ -1.46
CBX3-207ENST00000481300 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.93□□□□□ -1.46
CBX3-207ENST00000481300 H3BS24 57 aa5.93□□□□□ -1.46
CBX3-207ENST00000481300 STK10O94804 968 aaKnown RBP5.93□□□□□ -1.46
CBX3-207ENST00000481300 FARP2O94887 1054 aaPredicted RBP5.93□□□□□ -1.46
CBX3-207ENST00000481300 YARSP54577 528 aaKnown RBP5.93□□□□□ -1.46
CBX3-207ENST00000481300 MESP2Q0VG99 397 aa5.93□□□□□ -1.46
CBX3-207ENST00000481300 DPH2Q9BQC3 489 aaPredicted RBP5.93□□□□□ -1.46
CBX3-207ENST00000481300 TJP2Q9UDY2 1190 aa5.93□□□□□ -1.46
CBX3-207ENST00000481300 CBX7O95931 251 aa5.92□□□□□ -1.46
CBX3-207ENST00000481300 TMEM201Q5SNT2 666 aa5.92□□□□□ -1.46
CBX3-207ENST00000481300 MRPL41Q8IXM3 137 aaKnown RBP5.92□□□□□ -1.46
CBX3-207ENST00000481300 FAM13CQ8NE31 585 aa5.92□□□□□ -1.46
CBX3-207ENST00000481300 OR6P1Q8NGX9 317 aa5.92□□□□□ -1.46
CBX3-207ENST00000481300 UBXN4Q92575 508 aa5.92□□□□□ -1.46
CBX3-207ENST00000481300 TMEM87BQ96K49 555 aa5.92□□□□□ -1.46
CBX3-207ENST00000481300 GMIPQ9P107 970 aa5.92□□□□□ -1.46
CBX3-207ENST00000481300 MRVI1Q9Y6F6 885 aa5.92□□□□□ -1.46
CBX3-207ENST00000481300 LRRC10BA6NIK2 292 aa5.91□□□□□ -1.46
CBX3-207ENST00000481300 KCNMB1Q16558 191 aa5.91□□□□□ -1.46
CBX3-207ENST00000481300 SLC6A19Q695T7 634 aa5.91□□□□□ -1.46
CBX3-207ENST00000481300 ZNF746Q6NUN9 644 aaPredicted RBP5.91□□□□□ -1.46
CBX3-207ENST00000481300 THAP5Q7Z6K1 395 aa5.91□□□□□ -1.46
CBX3-207ENST00000481300 CDH24Q86UP0 819 aa5.91□□□□□ -1.46
CBX3-207ENST00000481300 MCATQ8IVS2 390 aaKnown RBP5.91□□□□□ -1.46
CBX3-207ENST00000481300 DHX38Q92620 1227 aaKnown RBP5.91□□□□□ -1.46
CBX3-207ENST00000481300 ARMC5Q96C12 935 aa5.91□□□□□ -1.46
CBX3-207ENST00000481300 ACSF2Q96CM8 615 aaPredicted RBP5.91□□□□□ -1.46
CBX3-207ENST00000481300 R3HCC1Q9Y3T6 440 aaKnown RBP5.91□□□□□ -1.46
CBX3-207ENST00000481300 RAG1P15918 1043 aa5.9□□□□□ -1.46
CBX3-207ENST00000481300 GIPRP48546 466 aa5.9□□□□□ -1.46
CBX3-207ENST00000481300 TNK2Q07912 1038 aa5.9□□□□□ -1.46
CBX3-207ENST00000481300 OVOS1Q6IE37 1185 aa5.9□□□□□ -1.46
CBX3-207ENST00000481300 CKAP2LQ8IYA6 745 aa5.9□□□□□ -1.46
CBX3-207ENST00000481300 PHACTR4Q8IZ21 702 aa5.9□□□□□ -1.46
CBX3-207ENST00000481300 RBBP8NLQ8NC74 664 aaPredicted RBP5.9□□□□□ -1.46
CBX3-207ENST00000481300 LIN37Q96GY3 246 aaPredicted RBP5.9□□□□□ -1.46
CBX3-207ENST00000481300 SHDQ96IW2 340 aa5.9□□□□□ -1.46
CBX3-207ENST00000481300 HIRIP3Q9BW71 556 aaPredicted RBP5.9□□□□□ -1.46
CBX3-207ENST00000481300 ZNF408Q9H9D4 720 aa5.9□□□□□ -1.46
CBX3-207ENST00000481300 SLC22A31A6NKX4 558 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 DBX1A6NMT0 343 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 MEIS3P2A8K0S8 358 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 UPK3BL1B0FP48 263 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 CHURC1-FNTBB4DL54 471 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 UPK3BL2E5RIL1 263 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 ETFBP38117 255 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 KIR3DL1P43629 444 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 AFMP43652 599 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 CHMP4BP1P59074 171 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 MLANAQ16655 118 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 TNNI3KQ59H18 835 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 ARSHQ5FYA8 562 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 NLRC3Q7RTR2 1065 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 LSRQ86X29 649 aaPredicted RBP5.89□□□□□ -1.47
CBX3-207ENST00000481300 KSR1Q8IVT5 923 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 SLFN12Q8IYM2 578 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 DNAJB8Q8NHS0 232 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 UBE2FQ969M7 185 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 COX4I2Q96KJ9 171 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 TM9SF2Q99805 663 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 ANTXR1Q9H6X2 564 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 ZSWIM5Q9P217 1185 aa5.89□□□□□ -1.47
CBX3-207ENST00000481300 CYP7A1P22680 504 aa5.88□□□□□ -1.47
CBX3-207ENST00000481300 GDNFP39905 211 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms