RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	GCM1	Q9NP62	436 aa		6.2	□□□□□ -1.42
CCNL1-223	ENST00000481173	RNF19A	Q9NV58	838 aa		6.2	□□□□□ -1.42
CCNL1-223	ENST00000481173	EBF1	Q9UH73	591 aa		6.2	□□□□□ -1.42
CCNL1-223	ENST00000481173	PEX10	O60683	326 aa		6.19	□□□□□ -1.42
CCNL1-223	ENST00000481173	RPL6	Q02878	288 aa	Known RBP	6.19	□□□□□ -1.42
CCNL1-223	ENST00000481173	TSNAXIP1	Q2TAA8	658 aa		6.19	□□□□□ -1.42
CCNL1-223	ENST00000481173	FAM13C	Q8NE31	585 aa		6.19	□□□□□ -1.42
CCNL1-223	ENST00000481173	CYB5D2	Q8WUJ1	264 aa		6.19	□□□□□ -1.42
CCNL1-223	ENST00000481173	SYTL4	Q96C24	671 aa	Predicted RBP	6.19	□□□□□ -1.42
CCNL1-223	ENST00000481173	FRMD6	Q96NE9	622 aa		6.19	□□□□□ -1.42
CCNL1-223	ENST00000481173	ZNF552	Q9H707	407 aa	Predicted RBP	6.19	□□□□□ -1.42
CCNL1-223	ENST00000481173	ADAM30	Q9UKF2	790 aa		6.19	□□□□□ -1.42
CCNL1-223	ENST00000481173	TLR6	Q9Y2C9	796 aa		6.19	□□□□□ -1.42
CCNL1-223	ENST00000481173	KCTD3	Q9Y597	815 aa		6.19	□□□□□ -1.42
CCNL1-223	ENST00000481173	TEX51	A0A1B0GUA7	166 aa		6.18	□□□□□ -1.42
CCNL1-223	ENST00000481173	SHISA3	A0PJX4	238 aa		6.18	□□□□□ -1.42
CCNL1-223	ENST00000481173	PSPN	O60542	156 aa		6.18	□□□□□ -1.42
CCNL1-223	ENST00000481173	PLCG1	P19174	1290 aa		6.18	□□□□□ -1.42
CCNL1-223	ENST00000481173	SSPN	Q14714	243 aa		6.18	□□□□□ -1.42
CCNL1-223	ENST00000481173	NR0B2	Q15466	257 aa		6.18	□□□□□ -1.42
CCNL1-223	ENST00000481173	MEI1	Q5TIA1	1274 aa		6.18	□□□□□ -1.42
CCNL1-223	ENST00000481173	TCERG1L	Q5VWI1	586 aa		6.18	□□□□□ -1.42
CCNL1-223	ENST00000481173	SIRT2	Q8IXJ6	389 aa		6.18	□□□□□ -1.42
CCNL1-223	ENST00000481173	KCNC2	Q96PR1	638 aa		6.18	□□□□□ -1.42
CCNL1-223	ENST00000481173	FOXD2	O60548	495 aa	Predicted RBP	6.17	□□□□□ -1.42
CCNL1-223	ENST00000481173	TRIM13	O60858	407 aa		6.17	□□□□□ -1.42
CCNL1-223	ENST00000481173	TEK	Q02763	1124 aa		6.17	□□□□□ -1.42
CCNL1-223	ENST00000481173	KCNA1	Q09470	495 aa		6.17	□□□□□ -1.42
CCNL1-223	ENST00000481173	ZNF385B	Q569K4	471 aa		6.17	□□□□□ -1.42
CCNL1-223	ENST00000481173	RNF141	Q8WVD5	230 aa		6.17	□□□□□ -1.42
CCNL1-223	ENST00000481173	SHISA4	Q96DD7	197 aa		6.17	□□□□□ -1.42
CCNL1-223	ENST00000481173	EFEMP2	O95967	443 aa		6.16	□□□□□ -1.42
CCNL1-223	ENST00000481173	TNNI2	P48788	182 aa		6.16	□□□□□ -1.42
CCNL1-223	ENST00000481173	SPPL2C	Q8IUH8	684 aa		6.16	□□□□□ -1.42
CCNL1-223	ENST00000481173	PANK1	Q8TE04	598 aa		6.16	□□□□□ -1.42
CCNL1-223	ENST00000481173	JAG2	Q9Y219	1238 aa		6.16	□□□□□ -1.42
CCNL1-223	ENST00000481173	AK5	Q9Y6K8	562 aa		6.16	□□□□□ -1.42
CCNL1-223	ENST00000481173		F6X3S4	739 aa		6.15	□□□□□ -1.42
CCNL1-223	ENST00000481173	RFXAP	O00287	272 aa		6.15	□□□□□ -1.42
CCNL1-223	ENST00000481173	PI3	P19957	117 aa		6.15	□□□□□ -1.42
CCNL1-223	ENST00000481173	YARS	P54577	528 aa	Known RBP	6.15	□□□□□ -1.42
CCNL1-223	ENST00000481173	CHRNE	Q04844	493 aa		6.15	□□□□□ -1.42
CCNL1-223	ENST00000481173	DUSP4	Q13115	394 aa		6.15	□□□□□ -1.42
CCNL1-223	ENST00000481173	ADGRF1	Q5T601	910 aa		6.15	□□□□□ -1.42
CCNL1-223	ENST00000481173	BNC2	Q6ZN30	1099 aa	Predicted RBP	6.15	□□□□□ -1.42
CCNL1-223	ENST00000481173	ANKS4B	Q8N8V4	417 aa		6.15	□□□□□ -1.42
CCNL1-223	ENST00000481173	MARCH10	Q8NA82	808 aa	Predicted RBP	6.15	□□□□□ -1.42
CCNL1-223	ENST00000481173	KREMEN1	Q96MU8	473 aa		6.15	□□□□□ -1.42
CCNL1-223	ENST00000481173	TRAIP	Q9BWF2	469 aa		6.15	□□□□□ -1.42
CCNL1-223	ENST00000481173	NOTO	A8MTQ0	251 aa		6.14	□□□□□ -1.43
CCNL1-223	ENST00000481173	PRPF40A	O75400	957 aa	Known RBP	6.14	□□□□□ -1.43
CCNL1-223	ENST00000481173	NFIX	Q14938	502 aa		6.14	□□□□□ -1.43
CCNL1-223	ENST00000481173	SNX17	Q15036	470 aa		6.14	□□□□□ -1.43
CCNL1-223	ENST00000481173	CLEC16A	Q2KHT3	1053 aa		6.14	□□□□□ -1.43
CCNL1-223	ENST00000481173	LINC01599	Q8WXQ3	324 aa		6.14	□□□□□ -1.43
CCNL1-223	ENST00000481173	DUSP9	Q99956	384 aa	Known RBP	6.14	□□□□□ -1.43
CCNL1-223	ENST00000481173	G6PC3	Q9BUM1	346 aa		6.14	□□□□□ -1.43
CCNL1-223	ENST00000481173	KLHL3	Q9UH77	587 aa		6.14	□□□□□ -1.43
CCNL1-223	ENST00000481173	RBM47	A0AV96	593 aa	Known RBP	6.13	□□□□□ -1.43
CCNL1-223	ENST00000481173	OR14I1	A6ND48	311 aa		6.13	□□□□□ -1.43
CCNL1-223	ENST00000481173	USP2	O75604	605 aa	Predicted RBP	6.13	□□□□□ -1.43
CCNL1-223	ENST00000481173	SYN1	P17600	705 aa		6.13	□□□□□ -1.43
CCNL1-223	ENST00000481173	SRSF3	P84103	164 aa	Known RBP	6.13	□□□□□ -1.43
CCNL1-223	ENST00000481173	TMEM201	Q5SNT2	666 aa		6.13	□□□□□ -1.43
CCNL1-223	ENST00000481173	CHURC1-FNTB	B4DL54	471 aa		6.12	□□□□□ -1.43
CCNL1-223	ENST00000481173	BPNT1	O95861	308 aa		6.12	□□□□□ -1.43
CCNL1-223	ENST00000481173	SDHB	P21912	280 aa		6.12	□□□□□ -1.43
CCNL1-223	ENST00000481173	RPL10	P27635	214 aa	Known RBP	6.12	□□□□□ -1.43
CCNL1-223	ENST00000481173	EPHB3	P54753	998 aa		6.12	□□□□□ -1.43
CCNL1-223	ENST00000481173	NLRX1	Q86UT6	975 aa		6.12	□□□□□ -1.43
CCNL1-223	ENST00000481173	TMEM151B	Q8IW70	566 aa		6.12	□□□□□ -1.43
CCNL1-223	ENST00000481173	SLFN12	Q8IYM2	578 aa		6.12	□□□□□ -1.43
CCNL1-223	ENST00000481173	PHC3	Q8NDX5	983 aa		6.12	□□□□□ -1.43
CCNL1-223	ENST00000481173	REV1	Q9UBZ9	1251 aa		6.12	□□□□□ -1.43
CCNL1-223	ENST00000481173	MBD1	Q9UIS9	605 aa	Predicted RBP	6.12	□□□□□ -1.43
CCNL1-223	ENST00000481173	CILP	O75339	1184 aa		6.11	□□□□□ -1.43
CCNL1-223	ENST00000481173	VMAC	Q2NL98	169 aa		6.11	□□□□□ -1.43
CCNL1-223	ENST00000481173	AEBP1	Q8IUX7	1158 aa		6.11	□□□□□ -1.43
CCNL1-223	ENST00000481173	SIGLEC10	Q96LC7	697 aa		6.11	□□□□□ -1.43
CCNL1-223	ENST00000481173	ASPN	Q9BXN1	380 aa		6.11	□□□□□ -1.43
CCNL1-223	ENST00000481173	XYLT2	Q9H1B5	865 aa		6.11	□□□□□ -1.43
CCNL1-223	ENST00000481173	SIRT5	Q9NXA8	310 aa		6.11	□□□□□ -1.43
CCNL1-223	ENST00000481173	RTEL1	Q9NZ71	1219 aa		6.11	□□□□□ -1.43
CCNL1-223	ENST00000481173	ZMYM5	Q9UJ78	669 aa		6.11	□□□□□ -1.43
CCNL1-223	ENST00000481173	IRAK3	Q9Y616	596 aa		6.11	□□□□□ -1.43
CCNL1-223	ENST00000481173	OTOL1	A6NHN0	477 aa	Predicted RBP	6.1	□□□□□ -1.43
CCNL1-223	ENST00000481173	GRIN3B	O60391	1043 aa		6.1	□□□□□ -1.43
CCNL1-223	ENST00000481173	RLBP1	P12271	317 aa		6.1	□□□□□ -1.43
CCNL1-223	ENST00000481173	AFF3	P51826	1226 aa	Known RBP	6.1	□□□□□ -1.43
CCNL1-223	ENST00000481173	WAPL	Q7Z5K2	1190 aa		6.1	□□□□□ -1.43
CCNL1-223	ENST00000481173	PHACTR4	Q8IZ21	702 aa		6.1	□□□□□ -1.43
CCNL1-223	ENST00000481173	FEZF2	Q8TBJ5	459 aa		6.1	□□□□□ -1.43
CCNL1-223	ENST00000481173	CCDC74B	Q96LY2	380 aa		6.1	□□□□□ -1.43
CCNL1-223	ENST00000481173	KIF2C	Q99661	725 aa		6.1	□□□□□ -1.43
CCNL1-223	ENST00000481173	FOXP3	Q9BZS1	431 aa		6.1	□□□□□ -1.43
CCNL1-223	ENST00000481173	ZNF281	Q9Y2X9	895 aa		6.1	□□□□□ -1.43
CCNL1-223	ENST00000481173	FAM221A	A4D161	298 aa		6.09	□□□□□ -1.43
CCNL1-223	ENST00000481173	DNAJA2	O60884	412 aa		6.09	□□□□□ -1.43
CCNL1-223	ENST00000481173	F13A1	P00488	732 aa		6.09	□□□□□ -1.43
CCNL1-223	ENST00000481173	VIPR1	P32241	457 aa		6.09	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms