RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 PLIN4Q96Q06 1357 aa24.04■■□□□ 1.44
CTSA-206ENST00000480961 FKTNO75072 461 aa24.04■■□□□ 1.44
CTSA-206ENST00000480961 HOXA7P31268 230 aaPredicted RBP24.04■■□□□ 1.44
CTSA-206ENST00000480961 IRX3P78415 501 aaPredicted RBP24.04■■□□□ 1.44
CTSA-206ENST00000480961 PRDM10Q9NQV6 1147 aa24.04■■□□□ 1.44
CTSA-206ENST00000480961 PNMA3Q9UL41 463 aa24.04■■□□□ 1.44
CTSA-206ENST00000480961 USP17L15C9J2P7 530 aa24.03■■□□□ 1.44
CTSA-206ENST00000480961 USP17L13C9JLJ4 530 aa24.03■■□□□ 1.44
CTSA-206ENST00000480961 USP17L11C9JVI0 530 aa24.03■■□□□ 1.44
CTSA-206ENST00000480961 USP17L18D6R9N7 530 aa24.03■■□□□ 1.44
CTSA-206ENST00000480961 USP17L22D6RA61 530 aa24.03■■□□□ 1.44
CTSA-206ENST00000480961 USP17L17D6RBQ6 530 aa24.03■■□□□ 1.44
CTSA-206ENST00000480961 USP17L19D6RCP7 530 aa24.03■■□□□ 1.44
CTSA-206ENST00000480961 USP17L20D6RJB6 530 aa24.03■■□□□ 1.44
CTSA-206ENST00000480961 SLC27A2O14975 620 aa24.03■■□□□ 1.44
CTSA-206ENST00000480961 PEX10O60683 326 aa24.03■■□□□ 1.44
CTSA-206ENST00000480961 USP17L24Q0WX57 530 aa24.03■■□□□ 1.44
CTSA-206ENST00000480961 C17orf99Q6UX52 265 aa24.03■■□□□ 1.44
CTSA-206ENST00000480961 STOX1Q6ZVD7 989 aa24.03■■□□□ 1.44
CTSA-206ENST00000480961 MKL1Q969V6 931 aa24.03■■□□□ 1.44
CTSA-206ENST00000480961 NUP88Q99567 741 aaPredicted RBP24.03■■□□□ 1.44
CTSA-206ENST00000480961 GOPCQ9HD26 462 aa24.03■■□□□ 1.44
CTSA-206ENST00000480961 ADGRA2Q96PE1 1338 aa24.03■■□□□ 1.44
CTSA-206ENST00000480961 E7EWF7 191 aa24.02■■□□□ 1.44
CTSA-206ENST00000480961 F5H6K3 240 aa24.02■■□□□ 1.44
CTSA-206ENST00000480961 SP3Q02447 781 aa24.02■■□□□ 1.44
CTSA-206ENST00000480961 KLRC3Q07444 240 aa24.02■■□□□ 1.44
CTSA-206ENST00000480961 COL13A1Q5TAT6 717 aaPredicted RBP24.02■■□□□ 1.44
CTSA-206ENST00000480961 CREB3L3Q68CJ9 461 aa24.02■■□□□ 1.44
CTSA-206ENST00000480961 SAMD1Q6SPF0 538 aaPredicted RBP24.02■■□□□ 1.44
CTSA-206ENST00000480961 CATSPERGQ6ZRH7 1159 aa24.02■■□□□ 1.44
CTSA-206ENST00000480961 TANGO6Q9C0B7 1094 aa24.02■■□□□ 1.44
CTSA-206ENST00000480961 ZSWIM5Q9P217 1185 aa24.02■■□□□ 1.44
CTSA-206ENST00000480961 NDUFB10O96000 172 aa24.01■■□□□ 1.43
CTSA-206ENST00000480961 NECTIN1Q15223 517 aa24.01■■□□□ 1.43
CTSA-206ENST00000480961 CD99L2Q8TCZ2 262 aa24.01■■□□□ 1.43
CTSA-206ENST00000480961 LPAR1Q92633 364 aa24.01■■□□□ 1.43
CTSA-206ENST00000480961 KRT23Q9C075 422 aa24.01■■□□□ 1.43
CTSA-206ENST00000480961 MTMR7Q9Y216 660 aa24.01■■□□□ 1.43
CTSA-206ENST00000480961 HERVK_113P62684 666 aa24■■□□□ 1.43
CTSA-206ENST00000480961 CAP1Q01518 475 aa24■■□□□ 1.43
CTSA-206ENST00000480961 FAM83BQ5T0W9 1011 aa24■■□□□ 1.43
CTSA-206ENST00000480961 CYB5R4Q7L1T6 521 aa24■■□□□ 1.43
CTSA-206ENST00000480961 ANKRD13CQ8N6S4 541 aa24■■□□□ 1.43
CTSA-206ENST00000480961 CNNM2Q9H8M5 875 aa24■■□□□ 1.43
CTSA-206ENST00000480961 TCP11L1Q9NUJ3 509 aa24■■□□□ 1.43
CTSA-206ENST00000480961 BCRP11274 1271 aa23.99■■□□□ 1.43
CTSA-206ENST00000480961 TRDNQ13061 729 aa23.99■■□□□ 1.43
CTSA-206ENST00000480961 NOM1Q5C9Z4 860 aaKnown RBP23.99■■□□□ 1.43
CTSA-206ENST00000480961 POTEEQ6S8J3 1075 aa23.99■■□□□ 1.43
CTSA-206ENST00000480961 TMEM47Q9BQJ4 181 aa23.99■■□□□ 1.43
CTSA-206ENST00000480961 PTPRFP10586 1907 aa23.99■■□□□ 1.43
CTSA-206ENST00000480961 MYH8P13535 1937 aa23.99■■□□□ 1.43
CTSA-206ENST00000480961 WDR46O15213 610 aaKnown RBP23.98■■□□□ 1.43
CTSA-206ENST00000480961 NOVP48745 357 aa23.98■■□□□ 1.43
CTSA-206ENST00000480961 SLFN13Q68D06 897 aa23.98■■□□□ 1.43
CTSA-206ENST00000480961 RCSD1Q6JBY9 416 aa23.98■■□□□ 1.43
CTSA-206ENST00000480961 RASGRP2Q7LDG7 609 aa23.98■■□□□ 1.43
CTSA-206ENST00000480961 CHST3Q7LGC8 479 aa23.98■■□□□ 1.43
CTSA-206ENST00000480961 ARHGAP39Q9C0H5 1083 aa23.98■■□□□ 1.43
CTSA-206ENST00000480961 FBXO28Q9NVF7 368 aa23.98■■□□□ 1.43
CTSA-206ENST00000480961 ISY1Q9ULR0 285 aaKnown RBP23.98■■□□□ 1.43
CTSA-206ENST00000480961 LOC285556D6RIA3 1793 aa23.98■■□□□ 1.43
CTSA-206ENST00000480961 FLOT1O75955 427 aa23.97■■□□□ 1.43
CTSA-206ENST00000480961 MCCP23508 829 aa23.97■■□□□ 1.43
CTSA-206ENST00000480961 COL9A3Q14050 684 aaPredicted RBP23.97■■□□□ 1.43
CTSA-206ENST00000480961 RALYLQ86SE5 291 aaKnown RBP23.97■■□□□ 1.43
CTSA-206ENST00000480961 ZSCAN10Q96SZ4 725 aaPredicted RBP23.97■■□□□ 1.43
CTSA-206ENST00000480961 PAGR1Q9BTK6 254 aa23.97■■□□□ 1.43
CTSA-206ENST00000480961 GREB1LQ9C091 1923 aaPredicted RBP23.97■■□□□ 1.43
CTSA-206ENST00000480961 TXNRD2Q9NNW7 524 aa23.97■■□□□ 1.43
CTSA-206ENST00000480961 RBPJLQ9UBG7 517 aa23.97■■□□□ 1.43
CTSA-206ENST00000480961 TOP1P11387 765 aaKnown RBP23.96■■□□□ 1.43
CTSA-206ENST00000480961 COG2Q14746 738 aa23.96■■□□□ 1.43
CTSA-206ENST00000480961 PPP4R3BQ5MIZ7 849 aa23.96■■□□□ 1.43
CTSA-206ENST00000480961 IQCA1Q86XH1 822 aa23.96■■□□□ 1.43
CTSA-206ENST00000480961 RASEFQ8IZ41 740 aa23.96■■□□□ 1.43
CTSA-206ENST00000480961 GMCL1P1Q8NEA9 526 aa23.96■■□□□ 1.43
CTSA-206ENST00000480961 NCOA7Q8NI08 942 aa23.96■■□□□ 1.43
CTSA-206ENST00000480961 SPDYE16A6NNV3 312 aaPredicted RBP23.95■■□□□ 1.42
CTSA-206ENST00000480961 CTGFP29279 349 aa23.95■■□□□ 1.42
CTSA-206ENST00000480961 GCLCP48506 637 aaPredicted RBP23.95■■□□□ 1.42
CTSA-206ENST00000480961 LACTBP83111 547 aaPredicted RBP23.95■■□□□ 1.42
CTSA-206ENST00000480961 ERO1AQ96HE7 468 aa23.95■■□□□ 1.42
CTSA-206ENST00000480961 UBAC1Q9BSL1 405 aa23.95■■□□□ 1.42
CTSA-206ENST00000480961 TNKSO95271 1327 aa23.94■■□□□ 1.42
CTSA-206ENST00000480961 REC8O95072 547 aa23.94■■□□□ 1.42
CTSA-206ENST00000480961 ENAHQ8N8S7 591 aaPredicted RBP23.94■■□□□ 1.42
CTSA-206ENST00000480961 ATG4CQ96DT6 458 aa23.94■■□□□ 1.42
CTSA-206ENST00000480961 TTC14Q96N46 770 aa23.94■■□□□ 1.42
CTSA-206ENST00000480961 SYNPO2Q9UMS6 1093 aa23.94■■□□□ 1.42
CTSA-206ENST00000480961 CNMDO75829 334 aa23.93■■□□□ 1.42
CTSA-206ENST00000480961 BMP3P12645 472 aa23.93■■□□□ 1.42
CTSA-206ENST00000480961 DSG3P32926 999 aa23.93■■□□□ 1.42
CTSA-206ENST00000480961 Q3C1V9 767 aa23.93■■□□□ 1.42
CTSA-206ENST00000480961 RNF20Q5VTR2 975 aa23.93■■□□□ 1.42
CTSA-206ENST00000480961 KCTD1Q719H9 257 aa23.93■■□□□ 1.42
CTSA-206ENST00000480961 DGKHQ86XP1 1220 aa23.93■■□□□ 1.42
CTSA-206ENST00000480961 MB21D2Q8IYB1 491 aaPredicted RBP23.93■■□□□ 1.42
CTSA-206ENST00000480961 HOXC10Q9NYD6 342 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms