RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 ZEB2O60315 1214 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 HSP90AB1P08238 724 aaKnown RBP9.73□□□□□ -0.85
LSM5-210ENST00000480956 LPOP22079 712 aaPredicted RBP9.73□□□□□ -0.85
LSM5-210ENST00000480956 INPP5BP32019 993 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 ECE1P42892 770 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 GRB10Q13322 594 aa9.73□□□□□ -0.85
LSM5-210ENST00000480956 SIAH2O43255 324 aa9.72□□□□□ -0.85
LSM5-210ENST00000480956 CBFA2T2O43439 604 aa9.72□□□□□ -0.85
LSM5-210ENST00000480956 PAGE1O75459 146 aa9.72□□□□□ -0.85
LSM5-210ENST00000480956 SLC5A1P13866 664 aa9.72□□□□□ -0.85
LSM5-210ENST00000480956 IREB2P48200 963 aaKnown RBP9.72□□□□□ -0.85
LSM5-210ENST00000480956 CCDC92Q53HC0 331 aaPredicted RBP9.72□□□□□ -0.85
LSM5-210ENST00000480956 RC3H1Q5TC82 1133 aaKnown RBP9.72□□□□□ -0.85
LSM5-210ENST00000480956 ARMC3Q5W041 872 aa9.72□□□□□ -0.85
LSM5-210ENST00000480956 MZT2BQ6NZ67 158 aa9.72□□□□□ -0.85
LSM5-210ENST00000480956 SCUBE1Q8IWY4 988 aa9.72□□□□□ -0.85
LSM5-210ENST00000480956 SUSD3Q96L08 255 aa9.72□□□□□ -0.85
LSM5-210ENST00000480956 EIF2AK1Q9BQI3 630 aaKnown RBP9.72□□□□□ -0.85
LSM5-210ENST00000480956 SLC13A1Q9BZW2 595 aa9.72□□□□□ -0.85
LSM5-210ENST00000480956 RETREG1Q9H6L5 497 aa9.72□□□□□ -0.85
LSM5-210ENST00000480956 ARHGEF4Q9NR80 690 aa9.72□□□□□ -0.85
LSM5-210ENST00000480956 ASGR2P07307 311 aa9.71□□□□□ -0.85
LSM5-210ENST00000480956 ADD1P35611 737 aaKnown RBP9.71□□□□□ -0.85
LSM5-210ENST00000480956 ID4P47928 161 aa9.71□□□□□ -0.85
LSM5-210ENST00000480956 RBM10P98175 930 aaKnown RBP9.71□□□□□ -0.85
LSM5-210ENST00000480956 C16orf54Q6UWD8 224 aa9.71□□□□□ -0.85
LSM5-210ENST00000480956 CCT6BQ92526 530 aa9.71□□□□□ -0.85
LSM5-210ENST00000480956 FUBP3Q96I24 572 aaKnown RBP eCLIP9.71□□□□□ -0.855e-8■■■□□ 17.6
LSM5-210ENST00000480956 FHDC1Q9C0D6 1143 aaPredicted RBP9.71□□□□□ -0.85
LSM5-210ENST00000480956 MTFR1LQ9H019 292 aa9.71□□□□□ -0.85
LSM5-210ENST00000480956 CWC25Q9NXE8 425 aaPredicted RBP9.71□□□□□ -0.85
LSM5-210ENST00000480956 DIS3Q9Y2L1 958 aaKnown RBP9.71□□□□□ -0.85
LSM5-210ENST00000480956 A6NCN8 305 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 TNFRSF10AO00220 468 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 OPA1O60313 960 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 MAP3K6O95382 1288 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 APBA3O96018 575 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 RECQLP46063 649 aaPredicted RBP9.7□□□□□ -0.86
LSM5-210ENST00000480956 TRIM14Q14142 442 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 ARID5BQ14865 1188 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 LRRFIP1Q32MZ4 808 aaKnown RBP9.7□□□□□ -0.86
LSM5-210ENST00000480956 YOD1Q5VVQ6 348 aaPredicted RBP9.7□□□□□ -0.86
LSM5-210ENST00000480956 TSHZ3Q63HK5 1081 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 CYB5RLQ6IPT4 315 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 ARMCX6Q7L4S7 300 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 SPATA5Q8NB90 893 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 IL17REQ8NFR9 667 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 TRIM63Q969Q1 353 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 MRGPRX2Q96LB1 330 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 AIFM3Q96NN9 605 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 ANTXR1Q9H6X2 564 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 TNPO3Q9Y5L0 923 aaKnown RBP9.7□□□□□ -0.86
LSM5-210ENST00000480956 J3KRW8 73 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 WNT7AO00755 349 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 ATE1O95260 518 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 BPIP17213 487 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 MAPK9P45984 424 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 CENPCQ03188 943 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 FOXC1Q12948 553 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 SPECC1Q5M775 1068 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 WDR45BQ5MNZ6 344 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 TMEM240Q5SV17 173 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 KIAA1211LQ6NV74 962 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 LDHAL6AQ6ZMR3 332 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 ZNF280CQ8ND82 737 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 TCF12Q99081 682 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 PHAXQ9H814 394 aaKnown RBP9.7□□□□□ -0.86
LSM5-210ENST00000480956 TRIM39Q9HCM9 518 aa9.7□□□□□ -0.86
LSM5-210ENST00000480956 PRKD3O94806 890 aa9.69□□□□□ -0.86
LSM5-210ENST00000480956 CLN3Q13286 438 aa9.69□□□□□ -0.86
LSM5-210ENST00000480956 ZNF460Q14592 562 aa9.69□□□□□ -0.86
LSM5-210ENST00000480956 PDCD2Q16342 344 aaPredicted RBP9.69□□□□□ -0.86
LSM5-210ENST00000480956 TBC1D10BQ4KMP7 808 aaPredicted RBP9.69□□□□□ -0.86
LSM5-210ENST00000480956 HEATR6Q6AI08 1181 aaKnown RBP9.69□□□□□ -0.86
LSM5-210ENST00000480956 IQSEC1Q6DN90 963 aa9.69□□□□□ -0.86
LSM5-210ENST00000480956 IGF2-ASQ6U949 168 aa9.69□□□□□ -0.86
LSM5-210ENST00000480956 CBARPQ8N350 705 aaPredicted RBP9.69□□□□□ -0.86
LSM5-210ENST00000480956 OR2W6PQ8NHA6 318 aa9.69□□□□□ -0.86
LSM5-210ENST00000480956 NAA15Q9BXJ9 866 aaKnown RBP9.69□□□□□ -0.86
LSM5-210ENST00000480956 CRTAC1Q9NQ79 661 aa9.69□□□□□ -0.86
LSM5-210ENST00000480956 KANSL3Q9P2N6 904 aa9.69□□□□□ -0.86
LSM5-210ENST00000480956 WASHC2AQ641Q2 1341 aa9.69□□□□□ -0.86
LSM5-210ENST00000480956 A0A1W2PQU0 124 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 XYLBO75191 536 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 LTFP02788 710 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 IARSP41252 1262 aaKnown RBP9.68□□□□□ -0.86
LSM5-210ENST00000480956 SUMO1P63165 101 aaKnown RBP9.68□□□□□ -0.86
LSM5-210ENST00000480956 PRR20EP86478 221 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 PRR20CP86479 221 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 PRR20DP86480 221 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 PRR20BP86481 221 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 PRR20AP86496 221 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 CASC1Q6TDU7 716 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 OR8H2Q8N162 312 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 NAXEQ8NCW5 288 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 HSH2DQ96JZ2 352 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 TSPAN18Q96SJ8 248 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 SEC31BQ9NQW1 1179 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 PCDHB10Q9UN67 800 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 GJA3Q9Y6H8 435 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms