RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 KIAA1755Q5JYT7 1200 aa23.98■■□□□ 1.43
VPS36-204ENST00000480923 ZNF589Q86UQ0 364 aaPredicted RBP23.98■■□□□ 1.43
VPS36-204ENST00000480923 SPICE1Q8N0Z3 855 aa23.98■■□□□ 1.43
VPS36-204ENST00000480923 DIAPH3Q9NSV4 1193 aa23.98■■□□□ 1.43
VPS36-204ENST00000480923 RAD21O60216 631 aa23.97■■□□□ 1.43
VPS36-204ENST00000480923 GRK4P32298 578 aa23.97■■□□□ 1.43
VPS36-204ENST00000480923 ERVK-9P63128 1117 aa23.97■■□□□ 1.43
VPS36-204ENST00000480923 ERVK-24P63145 666 aa23.97■■□□□ 1.43
VPS36-204ENST00000480923 MLLT1Q03111 559 aaPredicted RBP23.97■■□□□ 1.43
VPS36-204ENST00000480923 CCDC171Q6TFL3 1326 aa23.97■■□□□ 1.43
VPS36-204ENST00000480923 CCAR1Q8IX12 1150 aaKnown RBP23.97■■□□□ 1.43
VPS36-204ENST00000480923 HTTP42858 3142 aa23.97■■□□□ 1.43
VPS36-204ENST00000480923 MFAP1P55081 439 aaKnown RBP23.96■■□□□ 1.43
VPS36-204ENST00000480923 CTDSPL2Q05D32 466 aa23.96■■□□□ 1.43
VPS36-204ENST00000480923 Q3C1V9 767 aa23.96■■□□□ 1.43
VPS36-204ENST00000480923 TMEM106CQ9BVX2 250 aa23.96■■□□□ 1.43
VPS36-204ENST00000480923 GOPCQ9HD26 462 aa23.96■■□□□ 1.43
VPS36-204ENST00000480923 BIN2Q9UBW5 565 aaPredicted RBP23.96■■□□□ 1.43
VPS36-204ENST00000480923 RABGAP1Q9Y3P9 1069 aa23.96■■□□□ 1.43
VPS36-204ENST00000480923 SPDYE16A6NNV3 312 aaPredicted RBP23.95■■□□□ 1.42
VPS36-204ENST00000480923 HIP1O00291 1037 aa23.95■■□□□ 1.42
VPS36-204ENST00000480923 TSPY3P0CV98 308 aa23.95■■□□□ 1.42
VPS36-204ENST00000480923 TSPY8P0CW00 308 aa23.95■■□□□ 1.42
VPS36-204ENST00000480923 HSPD1P10809 573 aaKnown RBP23.95■■□□□ 1.42
VPS36-204ENST00000480923 ALX1Q15699 326 aa23.95■■□□□ 1.42
VPS36-204ENST00000480923 TTC22Q5TAA0 569 aa23.95■■□□□ 1.42
VPS36-204ENST00000480923 POTEEQ6S8J3 1075 aa23.95■■□□□ 1.42
VPS36-204ENST00000480923 CWC27Q6UX04 472 aaKnown RBP23.95■■□□□ 1.42
VPS36-204ENST00000480923 NYAP2Q9P242 653 aa23.95■■□□□ 1.42
VPS36-204ENST00000480923 WDR46O15213 610 aaKnown RBP23.94■■□□□ 1.42
VPS36-204ENST00000480923 ADCY3O60266 1144 aa23.94■■□□□ 1.42
VPS36-204ENST00000480923 CNMDO75829 334 aa23.94■■□□□ 1.42
VPS36-204ENST00000480923 NEFLP07196 543 aa23.94■■□□□ 1.42
VPS36-204ENST00000480923 COG2Q14746 738 aa23.94■■□□□ 1.42
VPS36-204ENST00000480923 FAM47AQ5JRC9 791 aa23.94■■□□□ 1.42
VPS36-204ENST00000480923 LBX2Q6XYB7 198 aa23.94■■□□□ 1.42
VPS36-204ENST00000480923 SLAIN1Q8ND83 568 aa23.94■■□□□ 1.42
VPS36-204ENST00000480923 CWC22Q9HCG8 908 aaKnown RBP23.94■■□□□ 1.42
VPS36-204ENST00000480923 HOXC10Q9NYD6 342 aa23.94■■□□□ 1.42
VPS36-204ENST00000480923 POTEFA5A3E0 1075 aa23.93■■□□□ 1.42
VPS36-204ENST00000480923 FLOT1O75955 427 aa23.93■■□□□ 1.42
VPS36-204ENST00000480923 FGAP02671 866 aa23.93■■□□□ 1.42
VPS36-204ENST00000480923 MAPK4P31152 587 aa23.93■■□□□ 1.42
VPS36-204ENST00000480923 CCNA1P78396 465 aa23.93■■□□□ 1.42
VPS36-204ENST00000480923 TFAP4Q01664 338 aa23.93■■□□□ 1.42
VPS36-204ENST00000480923 IRF5Q13568 498 aa23.93■■□□□ 1.42
VPS36-204ENST00000480923 SAMD1Q6SPF0 538 aaPredicted RBP23.93■■□□□ 1.42
VPS36-204ENST00000480923 PORCNQ9H237 461 aa23.93■■□□□ 1.42
VPS36-204ENST00000480923 CLIP2Q9UDT6 1046 aa23.93■■□□□ 1.42
VPS36-204ENST00000480923 ANAPC4Q9UJX5 808 aa23.93■■□□□ 1.42
VPS36-204ENST00000480923 MGAMO43451 1857 aa23.93■■□□□ 1.42
VPS36-204ENST00000480923 IGKV6D-41A0A0C4DH26 115 aa23.92■■□□□ 1.42
VPS36-204ENST00000480923 GSPT1P15170 499 aaKnown RBP23.92■■□□□ 1.42
VPS36-204ENST00000480923 NEDD1Q8NHV4 660 aa23.92■■□□□ 1.42
VPS36-204ENST00000480923 BTBD7Q9P203 1132 aa23.92■■□□□ 1.42
VPS36-204ENST00000480923 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.92■■□□□ 1.42
VPS36-204ENST00000480923 ELNP15502 786 aa23.91■■□□□ 1.42
VPS36-204ENST00000480923 UBXN2AP68543 259 aa23.91■■□□□ 1.42
VPS36-204ENST00000480923 WDR78Q5VTH9 848 aa23.91■■□□□ 1.42
VPS36-204ENST00000480923 CEP95Q96GE4 821 aa23.91■■□□□ 1.42
VPS36-204ENST00000480923 INCENPQ9NQS7 918 aa23.91■■□□□ 1.42
VPS36-204ENST00000480923 TOMM22Q9NS69 142 aa23.91■■□□□ 1.42
VPS36-204ENST00000480923 MTMR4Q9NYA4 1195 aa23.91■■□□□ 1.42
VPS36-204ENST00000480923 PLIN4Q96Q06 1357 aa23.91■■□□□ 1.42
VPS36-204ENST00000480923 ZMYM6O95789 1325 aa23.9■■□□□ 1.42
VPS36-204ENST00000480923 TSPY2A6NKD2 308 aa23.9■■□□□ 1.42
VPS36-204ENST00000480923 DSG3P32926 999 aa23.9■■□□□ 1.42
VPS36-204ENST00000480923 MTFR1Q15390 333 aa23.9■■□□□ 1.42
VPS36-204ENST00000480923 FAM83BQ5T0W9 1011 aa23.9■■□□□ 1.42
VPS36-204ENST00000480923 PLEKHH3Q7Z736 793 aa23.9■■□□□ 1.42
VPS36-204ENST00000480923 PXYLP1Q8TE99 480 aa23.9■■□□□ 1.42
VPS36-204ENST00000480923 GJD2Q9UKL4 321 aa23.9■■□□□ 1.42
VPS36-204ENST00000480923 GREB1LQ9C091 1923 aaPredicted RBP23.89■■□□□ 1.42
VPS36-204ENST00000480923 TTLL1O95922 423 aa23.89■■□□□ 1.41
VPS36-204ENST00000480923 GPR142Q7Z601 462 aa23.89■■□□□ 1.41
VPS36-204ENST00000480923 ATG4CQ96DT6 458 aa23.89■■□□□ 1.41
VPS36-204ENST00000480923 NUDT12Q9BQG2 462 aa23.89■■□□□ 1.41
VPS36-204ENST00000480923 TACC3Q9Y6A5 838 aa23.89■■□□□ 1.41
VPS36-204ENST00000480923 F5H6K3 240 aa23.88■■□□□ 1.41
VPS36-204ENST00000480923 RANBP6O60518 1105 aaKnown RBP23.88■■□□□ 1.41
VPS36-204ENST00000480923 CYP2B6P20813 491 aa23.88■■□□□ 1.41
VPS36-204ENST00000480923 HAND2P61296 217 aa23.88■■□□□ 1.41
VPS36-204ENST00000480923 KLRC3Q07444 240 aa23.88■■□□□ 1.41
VPS36-204ENST00000480923 MB21D1Q8N884 522 aa23.88■■□□□ 1.41
VPS36-204ENST00000480923 SOCS4Q8WXH5 440 aa23.88■■□□□ 1.41
VPS36-204ENST00000480923 ORC4O43929 436 aa23.87■■□□□ 1.41
VPS36-204ENST00000480923 NDUFB10O96000 172 aa23.87■■□□□ 1.41
VPS36-204ENST00000480923 INHAP05111 366 aa23.87■■□□□ 1.41
VPS36-204ENST00000480923 EN2P19622 333 aaPredicted RBP23.87■■□□□ 1.41
VPS36-204ENST00000480923 RRP12Q5JTH9 1297 aaKnown RBP23.87■■□□□ 1.41
VPS36-204ENST00000480923 LRRC47Q8N1G4 583 aaKnown RBP23.87■■□□□ 1.41
VPS36-204ENST00000480923 MKL1Q969V6 931 aa23.87■■□□□ 1.41
VPS36-204ENST00000480923 NUP88Q99567 741 aaPredicted RBP23.87■■□□□ 1.41
VPS36-204ENST00000480923 FBXO28Q9NVF7 368 aa23.87■■□□□ 1.41
VPS36-204ENST00000480923 CCL5P13501 91 aa23.86■■□□□ 1.41
VPS36-204ENST00000480923 PLS1Q14651 629 aa23.86■■□□□ 1.41
VPS36-204ENST00000480923 PPP4R3BQ5MIZ7 849 aa23.86■■□□□ 1.41
VPS36-204ENST00000480923 SPATC1LQ9H0A9 340 aa23.86■■□□□ 1.41
VPS36-204ENST00000480923 RNF208Q9H0X6 261 aa23.86■■□□□ 1.41
VPS36-204ENST00000480923 SYNPO2Q9UMS6 1093 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms