RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 C8orf76Q96K31 380 aa17.18■□□□□ 0.34
SNRNP200-205ENST00000480835 ALG1Q9BT22 464 aa17.18■□□□□ 0.34
SNRNP200-205ENST00000480835 IQCA1LA6NCM1 817 aa17.17■□□□□ 0.34
SNRNP200-205ENST00000480835 PLEKHA8P1O95397 391 aa17.17■□□□□ 0.34
SNRNP200-205ENST00000480835 GH2P01242 217 aa17.17■□□□□ 0.34
SNRNP200-205ENST00000480835 PARP1P09874 1014 aaKnown RBP17.17■□□□□ 0.34
SNRNP200-205ENST00000480835 PTMSP20962 102 aa17.17■□□□□ 0.34
SNRNP200-205ENST00000480835 GUCY1A2P33402 732 aa17.17■□□□□ 0.34
SNRNP200-205ENST00000480835 SEPT2Q15019 361 aa17.17■□□□□ 0.34
SNRNP200-205ENST00000480835 NFKBIBQ15653 356 aa17.17■□□□□ 0.34
SNRNP200-205ENST00000480835 ASPRV1Q53RT3 343 aa17.17■□□□□ 0.34
SNRNP200-205ENST00000480835 CDAN1Q8IWY9 1227 aa17.17■□□□□ 0.34
SNRNP200-205ENST00000480835 WDR90Q96KV7 1748 aa17.17■□□□□ 0.34
SNRNP200-205ENST00000480835 ZSCAN16Q9H4T2 348 aaPredicted RBP17.17■□□□□ 0.34
SNRNP200-205ENST00000480835 MAD2L2Q9UI95 211 aa17.17■□□□□ 0.34
SNRNP200-205ENST00000480835 CNTNAP5Q8WYK1 1306 aa17.17■□□□□ 0.34
SNRNP200-205ENST00000480835 GOLGA6L22H0YM25 854 aa17.16■□□□□ 0.34
SNRNP200-205ENST00000480835 BAG4O95429 457 aaKnown RBP17.16■□□□□ 0.34
SNRNP200-205ENST00000480835 SNHG28P0DPA3 235 aa17.16■□□□□ 0.34
SNRNP200-205ENST00000480835 EEF2P13639 858 aaKnown RBP17.16■□□□□ 0.34
SNRNP200-205ENST00000480835 MCM4P33991 863 aa17.16■□□□□ 0.34
SNRNP200-205ENST00000480835 CAP2P40123 477 aa17.16■□□□□ 0.34
SNRNP200-205ENST00000480835 TRIM29Q14134 588 aa17.16■□□□□ 0.34
SNRNP200-205ENST00000480835 FOXD4L5Q5VV16 416 aaPredicted RBP17.16■□□□□ 0.34
SNRNP200-205ENST00000480835 CDC37L1Q7L3B6 337 aa17.16■□□□□ 0.34
SNRNP200-205ENST00000480835 SRBD1Q8N5C6 995 aaKnown RBP17.16■□□□□ 0.34
SNRNP200-205ENST00000480835 FBXO18Q8NFZ0 1043 aa17.16■□□□□ 0.34
SNRNP200-205ENST00000480835 ZC3H15Q8WU90 426 aaKnown RBP17.16■□□□□ 0.34
SNRNP200-205ENST00000480835 FOXD4L4Q8WXT5 416 aaPredicted RBP17.16■□□□□ 0.34
SNRNP200-205ENST00000480835 ZBTB21Q9ULJ3 1066 aa17.16■□□□□ 0.34
SNRNP200-205ENST00000480835 MYH15Q9Y2K3 1946 aa17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 DDX11L8A8MPP1 907 aa17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 ASNSP08243 561 aa17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 PDHBP11177 359 aa17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 XBP1P17861 261 aa17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 ATP2B2Q01814 1243 aa17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 RRP1BQ14684 758 aaKnown RBP17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 SUPT20HL1Q3ZLR7 823 aa17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 GPATCH4Q5T3I0 446 aaKnown RBP17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 MIGA2Q7L4E1 593 aa17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 LRRC47Q8N1G4 583 aaKnown RBP17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 DCAF4Q8WV16 495 aa17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 DCPSQ96C86 337 aaKnown RBP17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 SPZ1Q9BXG8 430 aa17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 ZNF341Q9BYN7 854 aa17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 ARHGEF10LQ9HCE6 1279 aa17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 TCHHQ07283 1943 aa17.15■□□□□ 0.34
SNRNP200-205ENST00000480835 DOCK1Q14185 1865 aa17.14■□□□□ 0.33
SNRNP200-205ENST00000480835 PHF20L1A8MW92 1017 aa17.14■□□□□ 0.33
SNRNP200-205ENST00000480835 CTNND1O60716 968 aaKnown RBP17.14■□□□□ 0.33
SNRNP200-205ENST00000480835 PPFIA3O75145 1194 aa17.14■□□□□ 0.33
SNRNP200-205ENST00000480835 EPHX2P34913 555 aa17.14■□□□□ 0.33
SNRNP200-205ENST00000480835 NBPF12Q5TAG4 269 aaPredicted RBP17.14■□□□□ 0.33
SNRNP200-205ENST00000480835 CLEC10AQ8IUN9 316 aa17.14■□□□□ 0.33
SNRNP200-205ENST00000480835 STAG2Q8N3U4 1231 aa17.14■□□□□ 0.33
SNRNP200-205ENST00000480835 CCDC82Q8N4S0 544 aa17.14■□□□□ 0.33
SNRNP200-205ENST00000480835 GMCL1P1Q8NEA9 526 aa17.14■□□□□ 0.33
SNRNP200-205ENST00000480835 SH2D4AQ9H788 454 aa17.14■□□□□ 0.33
SNRNP200-205ENST00000480835 USP17L5A8MUK1 530 aa17.13■□□□□ 0.33
SNRNP200-205ENST00000480835 KLRF2D3W0D1 207 aa17.13■□□□□ 0.33
SNRNP200-205ENST00000480835 JAG1P78504 1218 aa17.13■□□□□ 0.33
SNRNP200-205ENST00000480835 ZNF543Q08ER8 600 aa17.13■□□□□ 0.33
SNRNP200-205ENST00000480835 RESTQ13127 1097 aa17.13■□□□□ 0.33
SNRNP200-205ENST00000480835 SIAH1Q8IUQ4 282 aa17.13■□□□□ 0.33
SNRNP200-205ENST00000480835 SULF1Q8IWU6 871 aa17.13■□□□□ 0.33
SNRNP200-205ENST00000480835 FAM177A1Q8N128 213 aaPredicted RBP17.13■□□□□ 0.33
SNRNP200-205ENST00000480835 CMTR1Q8N1G2 835 aaKnown RBP17.13■□□□□ 0.33
SNRNP200-205ENST00000480835 ZNF112Q9UJU3 913 aa17.13■□□□□ 0.33
SNRNP200-205ENST00000480835 SCAF8Q9UPN6 1271 aaKnown RBP17.13■□□□□ 0.33
SNRNP200-205ENST00000480835 V9GY48 417 aaPredicted RBP17.13■□□□□ 0.33
SNRNP200-205ENST00000480835 BAZ2BQ9UIF8 2168 aaKnown RBP17.12■□□□□ 0.33
SNRNP200-205ENST00000480835 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
SNRNP200-205ENST00000480835 FOSBP53539 338 aa17.12■□□□□ 0.33
SNRNP200-205ENST00000480835 PKN1Q16512 942 aa17.12■□□□□ 0.33
SNRNP200-205ENST00000480835 PFKFB3Q16875 520 aaPredicted RBP17.12■□□□□ 0.33
SNRNP200-205ENST00000480835 SHROOM1Q2M3G4 852 aaPredicted RBP17.12■□□□□ 0.33
SNRNP200-205ENST00000480835 SLFN13Q68D06 897 aa17.12■□□□□ 0.33
SNRNP200-205ENST00000480835 KRT40Q6A162 431 aa17.12■□□□□ 0.33
SNRNP200-205ENST00000480835 USP17L2Q6R6M4 530 aa17.12■□□□□ 0.33
SNRNP200-205ENST00000480835 USP48Q86UV5 1035 aa17.12■□□□□ 0.33
SNRNP200-205ENST00000480835 AIFM3Q96NN9 605 aa17.12■□□□□ 0.33
SNRNP200-205ENST00000480835 MTMR7Q9Y216 660 aa17.12■□□□□ 0.33
SNRNP200-205ENST00000480835 SCG2P13521 617 aa17.11■□□□□ 0.33
SNRNP200-205ENST00000480835 SAFBQ15424 915 aaKnown RBP eCLIP17.11■□□□□ 0.33
SNRNP200-205ENST00000480835 BRAPQ7Z569 592 aa17.11■□□□□ 0.33
SNRNP200-205ENST00000480835 PNMA8AQ86V59 439 aaPredicted RBP17.11■□□□□ 0.33
SNRNP200-205ENST00000480835 GMCL1Q96IK5 515 aa17.11■□□□□ 0.33
SNRNP200-205ENST00000480835 TAF1DQ9H5J8 278 aaPredicted RBP17.11■□□□□ 0.33
SNRNP200-205ENST00000480835 RIOX1Q9H6W3 641 aa17.11■□□□□ 0.33
SNRNP200-205ENST00000480835 GOPCQ9HD26 462 aa17.11■□□□□ 0.33
SNRNP200-205ENST00000480835 SH3GLB2Q9NR46 395 aa17.11■□□□□ 0.33
SNRNP200-205ENST00000480835 TMX2Q9Y320 296 aa17.11■□□□□ 0.33
SNRNP200-205ENST00000480835 F5H6K3 240 aa17.1■□□□□ 0.33
SNRNP200-205ENST00000480835 GUCY1B3Q02153 619 aa17.1■□□□□ 0.33
SNRNP200-205ENST00000480835 KLRC3Q07444 240 aa17.1■□□□□ 0.33
SNRNP200-205ENST00000480835 CSPP1Q1MSJ5 1256 aa17.1■□□□□ 0.33
SNRNP200-205ENST00000480835 CCDC96Q2M329 555 aa17.1■□□□□ 0.33
SNRNP200-205ENST00000480835 ATL3Q6DD88 541 aa17.1■□□□□ 0.33
SNRNP200-205ENST00000480835 MCTP1Q6DN14 999 aa17.1■□□□□ 0.33
SNRNP200-205ENST00000480835 FERMT3Q86UX7 667 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms