RNA–Protein interactions for RNA: ENST00000480624.5

MACF1-217, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-217ENST00000480624 KRT26Q7Z3Y9 468 aa13.17□□□□□ -0.3
MACF1-217ENST00000480624 CMTR1Q8N1G2 835 aaKnown RBP13.17□□□□□ -0.3
MACF1-217ENST00000480624 LRRC47Q8N1G4 583 aaKnown RBP13.17□□□□□ -0.3
MACF1-217ENST00000480624 SRBD1Q8N5C6 995 aaKnown RBP13.17□□□□□ -0.3
MACF1-217ENST00000480624 CTCFLQ8NI51 663 aaPredicted RBP13.17□□□□□ -0.3
MACF1-217ENST00000480624 PHKBQ93100 1093 aa13.17□□□□□ -0.3
MACF1-217ENST00000480624 RRAGCQ9HB90 399 aa13.17□□□□□ -0.3
MACF1-217ENST00000480624 RBM28Q9NW13 759 aaKnown RBP13.17□□□□□ -0.3
MACF1-217ENST00000480624 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.17□□□□□ -0.3
MACF1-217ENST00000480624 MAD2L2Q9UI95 211 aa13.17□□□□□ -0.3
MACF1-217ENST00000480624 A0A1W2PRG0 241 aa13.16□□□□□ -0.3
MACF1-217ENST00000480624 USP2O75604 605 aaPredicted RBP13.16□□□□□ -0.3
MACF1-217ENST00000480624 CDKL5O76039 1030 aa13.16□□□□□ -0.3
MACF1-217ENST00000480624 FMNL1O95466 1100 aaPredicted RBP13.16□□□□□ -0.3
MACF1-217ENST00000480624 BRD1O95696 1058 aa13.16□□□□□ -0.3
MACF1-217ENST00000480624 POTEIP0CG38 1075 aa13.16□□□□□ -0.3
MACF1-217ENST00000480624 POTEJP0CG39 1038 aa13.16□□□□□ -0.3
MACF1-217ENST00000480624 VEGFAP15692 232 aaPredicted RBP13.16□□□□□ -0.3
MACF1-217ENST00000480624 INPP5BP32019 993 aa13.16□□□□□ -0.3
MACF1-217ENST00000480624 KIF5BP33176 963 aa13.16□□□□□ -0.3
MACF1-217ENST00000480624 NUCB2P80303 420 aa13.16□□□□□ -0.3
MACF1-217ENST00000480624 ATP2B2Q01814 1243 aa13.16□□□□□ -0.3
MACF1-217ENST00000480624 SLC35G1Q2M3R5 365 aa13.16□□□□□ -0.3
MACF1-217ENST00000480624 LARP1BQ659C4 914 aaKnown RBP13.16□□□□□ -0.3
MACF1-217ENST00000480624 STAG2Q8N3U4 1231 aa13.16□□□□□ -0.3
MACF1-217ENST00000480624 ACER1Q8TDN7 264 aa13.16□□□□□ -0.3
MACF1-217ENST00000480624 GINM1Q9NU53 330 aa13.16□□□□□ -0.3
MACF1-217ENST00000480624 ORC3Q9UBD5 711 aaPredicted RBP13.16□□□□□ -0.3
MACF1-217ENST00000480624 FZD1Q9UP38 647 aa13.16□□□□□ -0.3
MACF1-217ENST00000480624 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
MACF1-217ENST00000480624 UTRNP46939 3433 aa13.16□□□□□ -0.3
MACF1-217ENST00000480624 STK36Q9NRP7 1315 aa13.15□□□□□ -0.3
MACF1-217ENST00000480624 UBE2Q2LH0YL09 131 aa13.15□□□□□ -0.3
MACF1-217ENST00000480624 ASNSP08243 561 aa13.15□□□□□ -0.3
MACF1-217ENST00000480624 PDHBP11177 359 aa13.15□□□□□ -0.3
MACF1-217ENST00000480624 SSRP1Q08945 709 aaKnown RBP13.15□□□□□ -0.3
MACF1-217ENST00000480624 USP17L2Q6R6M4 530 aa13.15□□□□□ -0.3
MACF1-217ENST00000480624 CCDC82Q8N4S0 544 aa13.15□□□□□ -0.3
MACF1-217ENST00000480624 KLRG1Q96E93 195 aa13.15□□□□□ -0.3
MACF1-217ENST00000480624 CDCA5Q96FF9 252 aa13.15□□□□□ -0.3
MACF1-217ENST00000480624 GLIS2Q9BZE0 524 aaPredicted RBP13.15□□□□□ -0.3
MACF1-217ENST00000480624 SYNPO2Q9UMS6 1093 aa13.15□□□□□ -0.3
MACF1-217ENST00000480624 MTMR6Q9Y217 621 aa13.15□□□□□ -0.3
MACF1-217ENST00000480624 TMX2Q9Y320 296 aa13.15□□□□□ -0.3
MACF1-217ENST00000480624 PRPF3O43395 683 aaKnown RBP13.14□□□□□ -0.31
MACF1-217ENST00000480624 STX6O43752 255 aa13.14□□□□□ -0.31
MACF1-217ENST00000480624 PARP1P09874 1014 aaKnown RBP13.14□□□□□ -0.31
MACF1-217ENST00000480624 GOLGA8HP0CJ92 632 aa13.14□□□□□ -0.31
MACF1-217ENST00000480624 PDCP20941 246 aa13.14□□□□□ -0.31
MACF1-217ENST00000480624 ECE1P42892 770 aa13.14□□□□□ -0.31
MACF1-217ENST00000480624 GNAQP50148 359 aa13.14□□□□□ -0.31
MACF1-217ENST00000480624 C1QTNF8P60827 252 aa13.14□□□□□ -0.31
MACF1-217ENST00000480624 ZNF543Q08ER8 600 aa13.14□□□□□ -0.31
MACF1-217ENST00000480624 CDC37L1Q7L3B6 337 aa13.14□□□□□ -0.31
MACF1-217ENST00000480624 CCDC84Q86UT8 332 aaPredicted RBP13.14□□□□□ -0.31
MACF1-217ENST00000480624 FAM184AQ8NB25 1140 aa13.14□□□□□ -0.31
MACF1-217ENST00000480624 GMCL1P1Q8NEA9 526 aa13.14□□□□□ -0.31
MACF1-217ENST00000480624 ZKSCAN4Q969J2 545 aaPredicted RBP13.14□□□□□ -0.31
MACF1-217ENST00000480624 WRNIP1Q96S55 665 aa13.14□□□□□ -0.31
MACF1-217ENST00000480624 SLC26A6Q9BXS9 759 aa13.14□□□□□ -0.31
MACF1-217ENST00000480624 RNF26Q9BY78 433 aaPredicted RBP13.14□□□□□ -0.31
MACF1-217ENST00000480624 NMRK2Q9NPI5 230 aa13.14□□□□□ -0.31
MACF1-217ENST00000480624 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
MACF1-217ENST00000480624 CNTNAP5Q8WYK1 1306 aa13.13□□□□□ -0.31
MACF1-217ENST00000480624 POLR2AP24928 1970 aaKnown RBP13.13□□□□□ -0.31
MACF1-217ENST00000480624 KLRF2D3W0D1 207 aa13.13□□□□□ -0.31
MACF1-217ENST00000480624 F5H6K3 240 aa13.13□□□□□ -0.31
MACF1-217ENST00000480624 ZSCAN22P10073 491 aaPredicted RBP13.13□□□□□ -0.31
MACF1-217ENST00000480624 SMARCA1P28370 1054 aa13.13□□□□□ -0.31
MACF1-217ENST00000480624 KLRC3Q07444 240 aa13.13□□□□□ -0.31
MACF1-217ENST00000480624 PRKG1Q13976 671 aa13.13□□□□□ -0.31
MACF1-217ENST00000480624 PKN1Q16512 942 aa13.13□□□□□ -0.31
MACF1-217ENST00000480624 ASPRV1Q53RT3 343 aa13.13□□□□□ -0.31
MACF1-217ENST00000480624 KIAA1755Q5JYT7 1200 aa13.13□□□□□ -0.31
MACF1-217ENST00000480624 NOL9Q5SY16 702 aaKnown RBP13.13□□□□□ -0.31
MACF1-217ENST00000480624 SLFN13Q68D06 897 aa13.13□□□□□ -0.31
MACF1-217ENST00000480624 SCYL3Q8IZE3 742 aa13.13□□□□□ -0.31
MACF1-217ENST00000480624 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.13□□□□□ -0.31
MACF1-217ENST00000480624 DCAF4Q8WV16 495 aa13.13□□□□□ -0.31
MACF1-217ENST00000480624 AIFM3Q96NN9 605 aa13.13□□□□□ -0.31
MACF1-217ENST00000480624 LZTS2Q9BRK4 669 aa13.13□□□□□ -0.31
MACF1-217ENST00000480624 ARHGEF10LQ9HCE6 1279 aa13.13□□□□□ -0.31
MACF1-217ENST00000480624 KIF3AQ9Y496 699 aa13.13□□□□□ -0.31
MACF1-217ENST00000480624 V9GY48 417 aaPredicted RBP13.13□□□□□ -0.31
MACF1-217ENST00000480624 WDR33Q9C0J8 1336 aaKnown RBP13.13□□□□□ -0.31
MACF1-217ENST00000480624 CYTH3O43739 400 aa13.12□□□□□ -0.31
MACF1-217ENST00000480624 DEXIO95424 95 aa13.12□□□□□ -0.31
MACF1-217ENST00000480624 NDUFB10O96000 172 aa13.12□□□□□ -0.31
MACF1-217ENST00000480624 PDIA4P13667 645 aaKnown RBP13.12□□□□□ -0.31
MACF1-217ENST00000480624 FOXD4L5Q5VV16 416 aaPredicted RBP13.12□□□□□ -0.31
MACF1-217ENST00000480624 MAP1SQ66K74 1059 aaPredicted RBP13.12□□□□□ -0.31
MACF1-217ENST00000480624 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.12□□□□□ -0.31
MACF1-217ENST00000480624 TRIM22Q8IYM9 498 aa13.12□□□□□ -0.31
MACF1-217ENST00000480624 FOXD4L4Q8WXT5 416 aaPredicted RBP13.12□□□□□ -0.31
MACF1-217ENST00000480624 TNPO1Q92973 898 aaKnown RBP13.12□□□□□ -0.31
MACF1-217ENST00000480624 GMCL1Q96IK5 515 aa13.12□□□□□ -0.31
MACF1-217ENST00000480624 ALG1Q9BT22 464 aa13.12□□□□□ -0.31
MACF1-217ENST00000480624 SPZ1Q9BXG8 430 aa13.12□□□□□ -0.31
MACF1-217ENST00000480624 CPVLQ9H3G5 476 aa13.12□□□□□ -0.31
MACF1-217ENST00000480624 GPCPD1Q9NPB8 672 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms