RNA–Protein interactions for RNA: ENST00000480226.5

ITGB1-212, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-212ENST00000480226 GBP1P32455 592 aa7.42□□□□□ -1.22
ITGB1-212ENST00000480226 HK2P52789 917 aa7.42□□□□□ -1.22
ITGB1-212ENST00000480226 EGR3Q06889 387 aa7.42□□□□□ -1.22
ITGB1-212ENST00000480226 CWF19L2Q2TBE0 894 aaKnown RBP7.42□□□□□ -1.22
ITGB1-212ENST00000480226 FBXO27Q8NI29 283 aa7.42□□□□□ -1.22
ITGB1-212ENST00000480226 SUPT16HQ9Y5B9 1047 aaKnown RBP7.42□□□□□ -1.22
ITGB1-212ENST00000480226 TLR3O15455 904 aaKnown RBP7.41□□□□□ -1.22
ITGB1-212ENST00000480226 HPXP02790 462 aa7.41□□□□□ -1.22
ITGB1-212ENST00000480226 LTKP29376 864 aa7.41□□□□□ -1.22
ITGB1-212ENST00000480226 EIF4A3P38919 411 aaKnown RBP7.41□□□□□ -1.22
ITGB1-212ENST00000480226 FBXL19Q6PCT2 694 aa7.41□□□□□ -1.22
ITGB1-212ENST00000480226 DHX38Q92620 1227 aaKnown RBP7.41□□□□□ -1.22
ITGB1-212ENST00000480226 KIF2CQ99661 725 aa7.41□□□□□ -1.22
ITGB1-212ENST00000480226 COPRSQ9NQ92 184 aa7.41□□□□□ -1.22
ITGB1-212ENST00000480226 ZNF16P17020 682 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-212ENST00000480226 RAP1GAPP47736 663 aa7.4□□□□□ -1.22
ITGB1-212ENST00000480226 SYDE1Q6ZW31 735 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-212ENST00000480226 FBXO15Q8NCQ5 510 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-212ENST00000480226 LRRC3Q9BY71 257 aa7.4□□□□□ -1.22
ITGB1-212ENST00000480226 KCNQ5Q9NR82 932 aa7.4□□□□□ -1.22
ITGB1-212ENST00000480226 RGS13O14921 159 aa7.39□□□□□ -1.23
ITGB1-212ENST00000480226 GREM1O60565 184 aa7.39□□□□□ -1.23
ITGB1-212ENST00000480226 ERVFC1P60507 584 aa7.39□□□□□ -1.23
ITGB1-212ENST00000480226 MRPL58Q14197 206 aaKnown RBP7.39□□□□□ -1.23
ITGB1-212ENST00000480226 CLEC16AQ2KHT3 1053 aa7.39□□□□□ -1.23
ITGB1-212ENST00000480226 LDLRAD1Q5T700 205 aa7.39□□□□□ -1.23
ITGB1-212ENST00000480226 HS2ST1Q7LGA3 356 aa7.39□□□□□ -1.23
ITGB1-212ENST00000480226 OXR1Q8N573 874 aa7.39□□□□□ -1.23
ITGB1-212ENST00000480226 PDZD8Q8NEN9 1154 aa7.39□□□□□ -1.23
ITGB1-212ENST00000480226 DIRC2Q96SL1 478 aa7.39□□□□□ -1.23
ITGB1-212ENST00000480226 ASCC2Q9H1I8 757 aaPredicted RBP7.39□□□□□ -1.23
ITGB1-212ENST00000480226 NSUN3Q9H649 340 aaKnown RBP7.39□□□□□ -1.23
ITGB1-212ENST00000480226 GGT7Q9UJ14 662 aa7.39□□□□□ -1.23
ITGB1-212ENST00000480226 KRTAP4-8A0A0G2JLE6 195 aa7.38□□□□□ -1.23
ITGB1-212ENST00000480226 RBM47A0AV96 593 aaKnown RBP7.38□□□□□ -1.23
ITGB1-212ENST00000480226 SLC22A31A6NKX4 558 aa7.38□□□□□ -1.23
ITGB1-212ENST00000480226 DNAJA2O60884 412 aa7.38□□□□□ -1.23
ITGB1-212ENST00000480226 ATE1O95260 518 aa7.38□□□□□ -1.23
ITGB1-212ENST00000480226 TSPAN15O95858 294 aa7.38□□□□□ -1.23
ITGB1-212ENST00000480226 RAG1P15918 1043 aa7.38□□□□□ -1.23
ITGB1-212ENST00000480226 ZNF296Q8WUU4 475 aaPredicted RBP7.38□□□□□ -1.23
ITGB1-212ENST00000480226 BRMS1Q9HCU9 246 aa7.38□□□□□ -1.23
ITGB1-212ENST00000480226 PCDHB14Q9Y5E9 798 aa7.38□□□□□ -1.23
ITGB1-212ENST00000480226 PCDHA11Q9Y5I1 949 aa7.38□□□□□ -1.23
ITGB1-212ENST00000480226 ZGLP1P0C6A0 271 aa7.37□□□□□ -1.23
ITGB1-212ENST00000480226 RNF4P78317 190 aa7.37□□□□□ -1.23
ITGB1-212ENST00000480226 ARSHQ5FYA8 562 aa7.37□□□□□ -1.23
ITGB1-212ENST00000480226 LILRA2Q8N149 483 aa7.37□□□□□ -1.23
ITGB1-212ENST00000480226 RGS22Q8NE09 1264 aa7.37□□□□□ -1.23
ITGB1-212ENST00000480226 ENOX1Q8TC92 643 aaKnown RBP7.37□□□□□ -1.23
ITGB1-212ENST00000480226 TOX2Q96NM4 488 aa7.37□□□□□ -1.23
ITGB1-212ENST00000480226 DCP1AQ9NPI6 582 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-212ENST00000480226 GMIPQ9P107 970 aa7.37□□□□□ -1.23
ITGB1-212ENST00000480226 FITM1A5D6W6 292 aa7.36□□□□□ -1.23
ITGB1-212ENST00000480226 NFIBO00712 420 aa7.36□□□□□ -1.23
ITGB1-212ENST00000480226 ANKLE2Q86XL3 938 aa7.36□□□□□ -1.23
ITGB1-212ENST00000480226 SPPL2CQ8IUH8 684 aa7.36□□□□□ -1.23
ITGB1-212ENST00000480226 VWCEQ96DN2 955 aa7.36□□□□□ -1.23
ITGB1-212ENST00000480226 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.36□□□□□ -1.23
ITGB1-212ENST00000480226 EPB41L4BQ9H329 900 aa7.36□□□□□ -1.23
ITGB1-212ENST00000480226 RAD51AP2Q09MP3 1159 aa7.35□□□□□ -1.23
ITGB1-212ENST00000480226 DUSP4Q13115 394 aa7.35□□□□□ -1.23
ITGB1-212ENST00000480226 KRTAP19-4Q3LI73 84 aa7.35□□□□□ -1.23
ITGB1-212ENST00000480226 EHMT1Q9H9B1 1298 aa7.35□□□□□ -1.23
ITGB1-212ENST00000480226 SHISA3A0PJX4 238 aa7.34□□□□□ -1.23
ITGB1-212ENST00000480226 UBOX5O94941 541 aa7.34□□□□□ -1.23
ITGB1-212ENST00000480226 TMEM253P0C7T8 217 aa7.34□□□□□ -1.23
ITGB1-212ENST00000480226 TRHRP34981 398 aaPredicted RBP7.34□□□□□ -1.23
ITGB1-212ENST00000480226 CHRNEQ04844 493 aa7.34□□□□□ -1.23
ITGB1-212ENST00000480226 NMIQ13287 307 aaPredicted RBP7.34□□□□□ -1.23
ITGB1-212ENST00000480226 NR0B2Q15466 257 aa7.34□□□□□ -1.23
ITGB1-212ENST00000480226 SEZ6Q53EL9 994 aa7.34□□□□□ -1.23
ITGB1-212ENST00000480226 REXO1Q8N1G1 1221 aaKnown RBP7.34□□□□□ -1.23
ITGB1-212ENST00000480226 RNF32Q9H0A6 362 aa7.34□□□□□ -1.23
ITGB1-212ENST00000480226 SP110Q9HB58 689 aa7.34□□□□□ -1.23
ITGB1-212ENST00000480226 ZNF165P49910 485 aa7.33□□□□□ -1.24
ITGB1-212ENST00000480226 TEKQ02763 1124 aa7.33□□□□□ -1.24
ITGB1-212ENST00000480226 APOBRQ0VD83 1088 aa7.33□□□□□ -1.24
ITGB1-212ENST00000480226 CDCP2Q5VXM1 449 aa7.33□□□□□ -1.24
ITGB1-212ENST00000480226 ANKS4BQ8N8V4 417 aa7.33□□□□□ -1.24
ITGB1-212ENST00000480226 ZSCAN18Q8TBC5 510 aaPredicted RBP7.33□□□□□ -1.24
ITGB1-212ENST00000480226 SYTL5Q8TDW5 730 aaPredicted RBP7.33□□□□□ -1.24
ITGB1-212ENST00000480226 SLC26A8Q96RN1 970 aa7.33□□□□□ -1.24
ITGB1-212ENST00000480226 SLC6A17Q9H1V8 727 aa7.33□□□□□ -1.24
ITGB1-212ENST00000480226 C19orf44Q9H6X5 657 aa7.33□□□□□ -1.24
ITGB1-212ENST00000480226 CNNM2Q9H8M5 875 aa7.33□□□□□ -1.24
ITGB1-212ENST00000480226 CWC22Q9HCG8 908 aaKnown RBP7.33□□□□□ -1.24
ITGB1-212ENST00000480226 ADAMTS1Q9UHI8 967 aa7.33□□□□□ -1.24
ITGB1-212ENST00000480226 C1QTNF9P0C862 333 aa7.32□□□□□ -1.24
ITGB1-212ENST00000480226 MCM4P33991 863 aa7.32□□□□□ -1.24
ITGB1-212ENST00000480226 CCNFP41002 786 aa7.32□□□□□ -1.24
ITGB1-212ENST00000480226 CRKP46108 304 aa7.32□□□□□ -1.24
ITGB1-212ENST00000480226 SNX17Q15036 470 aa7.32□□□□□ -1.24
ITGB1-212ENST00000480226 LRRFIP1Q32MZ4 808 aaKnown RBP7.32□□□□□ -1.24
ITGB1-212ENST00000480226 NBPF12Q5TAG4 269 aaPredicted RBP7.32□□□□□ -1.24
ITGB1-212ENST00000480226 OVOS1Q6IE37 1185 aa7.32□□□□□ -1.24
ITGB1-212ENST00000480226 RNF111Q6ZNA4 994 aa7.32□□□□□ -1.24
ITGB1-212ENST00000480226 TMEM87AQ8NBN3 555 aa7.32□□□□□ -1.24
ITGB1-212ENST00000480226 DAGLBQ8NCG7 672 aa7.32□□□□□ -1.24
ITGB1-212ENST00000480226 UBP1Q9NZI7 540 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms