RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 RIMBP2O15034 1052 aa14.9□□□□□ -0.02
SEC13-216ENST00000479868 NT5C2P49902 561 aa14.9□□□□□ -0.02
SEC13-216ENST00000479868 TERF1P54274 439 aa14.9□□□□□ -0.02
SEC13-216ENST00000479868 NLRP5P59047 1200 aa14.9□□□□□ -0.02
SEC13-216ENST00000479868 ARID5BQ14865 1188 aa14.9□□□□□ -0.02
SEC13-216ENST00000479868 COL23A1Q86Y22 540 aaPredicted RBP14.9□□□□□ -0.02
SEC13-216ENST00000479868 ELOA2Q8IYF1 753 aaPredicted RBP14.9□□□□□ -0.02
SEC13-216ENST00000479868 FAM163AQ96GL9 167 aaPredicted RBP14.9□□□□□ -0.02
SEC13-216ENST00000479868 HSD3B7Q9H2F3 369 aa14.9□□□□□ -0.02
SEC13-216ENST00000479868 TCP11L1Q9NUJ3 509 aa14.9□□□□□ -0.02
SEC13-216ENST00000479868 MAD2L2Q9UI95 211 aa14.9□□□□□ -0.02
SEC13-216ENST00000479868 SNED1Q8TER0 1413 aa14.9□□□□□ -0.02
SEC13-216ENST00000479868 GAKO14976 1311 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 PRR29P0C7W0 189 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 BMP6P22004 513 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 GTF2IP78347 998 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 GRM4Q14833 912 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 ZNF174Q15697 407 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 SLC35G1Q2M3R5 365 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 CERS3Q8IU89 383 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 TBC1D22AQ8WUA7 517 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 GPKOWQ92917 476 aaPredicted RBP eCLIP14.89□□□□□ -0.031e-12■□□□□ 8.8
SEC13-216ENST00000479868 STX8Q9UNK0 236 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 MTMR7Q9Y216 660 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 MORC2Q9Y6X9 1032 aaPredicted RBP14.89□□□□□ -0.03
SEC13-216ENST00000479868 IKBKBO14920 756 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 SRGNP10124 158 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 CDK8P49336 464 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 POSTNQ15063 836 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 PIK3AP1Q6ZUJ8 805 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 C16orf86Q6ZW13 317 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 GRAMD1CQ8IYS0 662 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 EPSTI1Q96J88 318 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 TMEM47Q9BQJ4 181 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 ATP6V0A2Q9Y487 856 aa14.89□□□□□ -0.03
SEC13-216ENST00000479868 FAM205AQ6ZU69 1335 aa14.88□□□□□ -0.03
SEC13-216ENST00000479868 A0A087X0B3 334 aa14.88□□□□□ -0.03
SEC13-216ENST00000479868 SMTNL1A8MU46 457 aa14.88□□□□□ -0.03
SEC13-216ENST00000479868 ACTN4O43707 911 aaKnown RBP14.88□□□□□ -0.03
SEC13-216ENST00000479868 TPM2P07951 284 aa14.88□□□□□ -0.03
SEC13-216ENST00000479868 PLCG2P16885 1265 aa14.88□□□□□ -0.03
SEC13-216ENST00000479868 TTC38Q5R3I4 469 aa14.88□□□□□ -0.03
SEC13-216ENST00000479868 RASGRP2Q7LDG7 609 aa14.88□□□□□ -0.03
SEC13-216ENST00000479868 TMC4Q7Z404 712 aa14.88□□□□□ -0.03
SEC13-216ENST00000479868 FILIP1Q7Z7B0 1213 aa14.88□□□□□ -0.03
SEC13-216ENST00000479868 XPO4Q9C0E2 1151 aaKnown RBP14.88□□□□□ -0.03
SEC13-216ENST00000479868 NRXN2Q9P2S2 1712 aa14.88□□□□□ -0.03
SEC13-216ENST00000479868 FOCADQ5VW36 1801 aa14.88□□□□□ -0.03
SEC13-216ENST00000479868 LMOD1P29536 600 aaPredicted RBP14.88□□□□□ -0.03
SEC13-216ENST00000479868 CCDC178Q5BJE1 867 aa14.88□□□□□ -0.03
SEC13-216ENST00000479868 LRRC8AQ8IWT6 810 aa14.88□□□□□ -0.03
SEC13-216ENST00000479868 AKT1S1Q96B36 256 aa14.88□□□□□ -0.03
SEC13-216ENST00000479868 IFNKQ9P0W0 207 aa14.88□□□□□ -0.03
SEC13-216ENST00000479868 DAGLAQ9Y4D2 1042 aa14.88□□□□□ -0.03
SEC13-216ENST00000479868 CYTH3O43739 400 aa14.87□□□□□ -0.03
SEC13-216ENST00000479868 ATP1A3P13637 1013 aa14.87□□□□□ -0.03
SEC13-216ENST00000479868 PTGDRQ13258 359 aa14.87□□□□□ -0.03
SEC13-216ENST00000479868 TYW1BQ6NUM6 668 aa14.87□□□□□ -0.03
SEC13-216ENST00000479868 SLF2Q8IX21 1173 aa14.87□□□□□ -0.03
SEC13-216ENST00000479868 NLGN1Q8N2Q7 840 aa14.87□□□□□ -0.03
SEC13-216ENST00000479868 EYA3Q99504 573 aa14.87□□□□□ -0.03
SEC13-216ENST00000479868 HOOK1Q9UJC3 728 aaKnown RBP14.87□□□□□ -0.03
SEC13-216ENST00000479868 SMC2O95347 1197 aa14.87□□□□□ -0.03
SEC13-216ENST00000479868 BMP15O95972 392 aa14.87□□□□□ -0.03
SEC13-216ENST00000479868 NT5DC1Q5TFE4 455 aa14.87□□□□□ -0.03
SEC13-216ENST00000479868 SYMPKQ92797 1274 aaKnown RBP14.87□□□□□ -0.03
SEC13-216ENST00000479868 ZNF287Q9HBT7 754 aa14.87□□□□□ -0.03
SEC13-216ENST00000479868 MAN1B1Q9UKM7 699 aa14.87□□□□□ -0.03
SEC13-216ENST00000479868 COL11A2P13942 1736 aaPredicted RBP14.86□□□□□ -0.03
SEC13-216ENST00000479868 GOLGA8HP0CJ92 632 aa14.86□□□□□ -0.03
SEC13-216ENST00000479868 SARSP49591 514 aaKnown RBP14.86□□□□□ -0.03
SEC13-216ENST00000479868 TPM4P67936 248 aa14.86□□□□□ -0.03
SEC13-216ENST00000479868 ATP2C1P98194 919 aaPredicted RBP14.86□□□□□ -0.03
SEC13-216ENST00000479868 MYL5Q02045 173 aa14.86□□□□□ -0.03
SEC13-216ENST00000479868 CERS5Q8N5B7 392 aa14.86□□□□□ -0.03
SEC13-216ENST00000479868 FERMT2Q96AC1 680 aa14.86□□□□□ -0.03
SEC13-216ENST00000479868 DHX58Q96C10 678 aa14.86□□□□□ -0.03
SEC13-216ENST00000479868 COA1Q9GZY4 146 aa14.86□□□□□ -0.03
SEC13-216ENST00000479868 GOLGB1Q14789 3259 aaKnown RBP14.86□□□□□ -0.03
SEC13-216ENST00000479868 PALM3A6NDB9 673 aaPredicted RBP14.85□□□□□ -0.03
SEC13-216ENST00000479868 F8W031 263 aaPredicted RBP14.85□□□□□ -0.03
SEC13-216ENST00000479868 APBA3O96018 575 aa14.85□□□□□ -0.03
SEC13-216ENST00000479868 BLIDQ8IZY5 108 aa14.85□□□□□ -0.03
SEC13-216ENST00000479868 SH3GLB2Q9NR46 395 aa14.85□□□□□ -0.03
SEC13-216ENST00000479868 UQCRHLA0A096LP55 91 aa14.85□□□□□ -0.03
SEC13-216ENST00000479868 VWA3AA6NCI4 1184 aa14.85□□□□□ -0.03
SEC13-216ENST00000479868 PLSCR1O15162 318 aa14.85□□□□□ -0.03
SEC13-216ENST00000479868 UQCRHP07919 91 aa14.85□□□□□ -0.03
SEC13-216ENST00000479868 NPR1P16066 1061 aa14.85□□□□□ -0.03
SEC13-216ENST00000479868 GNAQP50148 359 aa14.85□□□□□ -0.03
SEC13-216ENST00000479868 FANCCQ00597 558 aa14.85□□□□□ -0.03
SEC13-216ENST00000479868 WWC2Q6AWC2 1192 aa14.85□□□□□ -0.03
SEC13-216ENST00000479868 AEBP2Q6ZN18 517 aaPredicted RBP14.85□□□□□ -0.03
SEC13-216ENST00000479868 NEDD1Q8NHV4 660 aa14.85□□□□□ -0.03
SEC13-216ENST00000479868 RASGRP4Q8TDF6 673 aa14.85□□□□□ -0.03
SEC13-216ENST00000479868 MXD3Q9BW11 206 aa14.85□□□□□ -0.03
SEC13-216ENST00000479868 CPVLQ9H3G5 476 aa14.85□□□□□ -0.03
SEC13-216ENST00000479868 MMP10P09238 476 aa14.84□□□□□ -0.03
SEC13-216ENST00000479868 CALML3P27482 149 aa14.84□□□□□ -0.03
SEC13-216ENST00000479868 MCM7P33993 719 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms