RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 SIAH1Q8IUQ4 282 aa13.04□□□□□ -0.32
APTX-223ENST00000479656 AIFM3Q96NN9 605 aa13.04□□□□□ -0.32
APTX-223ENST00000479656 GJB4Q9NTQ9 266 aa13.04□□□□□ -0.32
APTX-223ENST00000479656 MAD2L2Q9UI95 211 aa13.04□□□□□ -0.32
APTX-223ENST00000479656 GOLGA8HP0CJ92 632 aa13.03□□□□□ -0.32
APTX-223ENST00000479656 KIF5BP33176 963 aa13.03□□□□□ -0.32
APTX-223ENST00000479656 OTUD7BQ6GQQ9 843 aa13.03□□□□□ -0.32
APTX-223ENST00000479656 USP17L2Q6R6M4 530 aa13.03□□□□□ -0.32
APTX-223ENST00000479656 TMTC3Q6ZXV5 915 aa13.03□□□□□ -0.32
APTX-223ENST00000479656 FERMT3Q86UX7 667 aa13.03□□□□□ -0.32
APTX-223ENST00000479656 TRIM22Q8IYM9 498 aa13.03□□□□□ -0.32
APTX-223ENST00000479656 L3MBTL3Q96JM7 780 aaPredicted RBP13.03□□□□□ -0.32
APTX-223ENST00000479656 ALG1Q9BT22 464 aa13.03□□□□□ -0.32
APTX-223ENST00000479656 NYAP2Q9P242 653 aa13.03□□□□□ -0.32
APTX-223ENST00000479656 V9GY48 417 aaPredicted RBP13.03□□□□□ -0.32
APTX-223ENST00000479656 hCG_1642624A0A1W2PR95 340 aa13.02□□□□□ -0.32
APTX-223ENST00000479656 PALM3A6NDB9 673 aaPredicted RBP13.02□□□□□ -0.32
APTX-223ENST00000479656 USP17L5A8MUK1 530 aa13.02□□□□□ -0.32
APTX-223ENST00000479656 BAG4O95429 457 aaKnown RBP13.02□□□□□ -0.32
APTX-223ENST00000479656 CAP2P40123 477 aa13.02□□□□□ -0.32
APTX-223ENST00000479656 ICA1Q05084 483 aa13.02□□□□□ -0.32
APTX-223ENST00000479656 PPP4R3BQ5MIZ7 849 aa13.02□□□□□ -0.32
APTX-223ENST00000479656 MKL1Q969V6 931 aa13.02□□□□□ -0.32
APTX-223ENST00000479656 C8orf76Q96K31 380 aa13.02□□□□□ -0.32
APTX-223ENST00000479656 STK36Q9NRP7 1315 aa13.02□□□□□ -0.32
APTX-223ENST00000479656 PHF20L1A8MW92 1017 aa13.02□□□□□ -0.33
APTX-223ENST00000479656 PRPF3O43395 683 aaKnown RBP13.02□□□□□ -0.33
APTX-223ENST00000479656 PDHBP11177 359 aa13.02□□□□□ -0.33
APTX-223ENST00000479656 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.33
APTX-223ENST00000479656 NBR1Q14596 966 aa13.02□□□□□ -0.33
APTX-223ENST00000479656 CLEC17AQ6ZS10 378 aa13.02□□□□□ -0.33
APTX-223ENST00000479656 GBP4Q96PP9 640 aa13.02□□□□□ -0.33
APTX-223ENST00000479656 RNF26Q9BY78 433 aaPredicted RBP13.02□□□□□ -0.33
APTX-223ENST00000479656 ZC3H4Q9UPT8 1303 aaKnown RBP13.01□□□□□ -0.33
APTX-223ENST00000479656 GREB1LQ9C091 1923 aaPredicted RBP13.01□□□□□ -0.33
APTX-223ENST00000479656 KLRF2D3W0D1 207 aa13.01□□□□□ -0.33
APTX-223ENST00000479656 DEXIO95424 95 aa13.01□□□□□ -0.33
APTX-223ENST00000479656 PARP1P09874 1014 aaKnown RBP13.01□□□□□ -0.33
APTX-223ENST00000479656 MCM4P33991 863 aa13.01□□□□□ -0.33
APTX-223ENST00000479656 EPHX2P34913 555 aa13.01□□□□□ -0.33
APTX-223ENST00000479656 GNAQP50148 359 aa13.01□□□□□ -0.33
APTX-223ENST00000479656 DLK2Q6UY11 383 aa13.01□□□□□ -0.33
APTX-223ENST00000479656 FBXO18Q8NFZ0 1043 aa13.01□□□□□ -0.33
APTX-223ENST00000479656 PIBF1Q8WXW3 757 aa13.01□□□□□ -0.33
APTX-223ENST00000479656 DCPSQ96C86 337 aaKnown RBP13.01□□□□□ -0.33
APTX-223ENST00000479656 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.01□□□□□ -0.33
APTX-223ENST00000479656 ZBTB21Q9ULJ3 1066 aa13.01□□□□□ -0.33
APTX-223ENST00000479656 FRMPD2Q68DX3 1309 aaPredicted RBP13□□□□□ -0.33
APTX-223ENST00000479656 CNTNAP5Q8WYK1 1306 aa13□□□□□ -0.33
APTX-223ENST00000479656 RAD21O60216 631 aa13□□□□□ -0.33
APTX-223ENST00000479656 PKN1Q16512 942 aa13□□□□□ -0.33
APTX-223ENST00000479656 MCTP1Q6DN14 999 aa13□□□□□ -0.33
APTX-223ENST00000479656 USP50Q70EL3 339 aaPredicted RBP13□□□□□ -0.33
APTX-223ENST00000479656 WASF1Q92558 559 aa13□□□□□ -0.33
APTX-223ENST00000479656 CPVLQ9H3G5 476 aa13□□□□□ -0.33
APTX-223ENST00000479656 FZD1Q9UP38 647 aa13□□□□□ -0.33
APTX-223ENST00000479656 PITPNM2Q9BZ72 1349 aa13□□□□□ -0.33
APTX-223ENST00000479656 A0A1W2PRG0 241 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 POTECB2RU33 542 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 CYTH3O43739 400 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 SNHG28P0DPA3 235 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 SLC35G1Q2M3R5 365 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 KRT40Q6A162 431 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 FAM173BQ6P4H8 233 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 UBA5Q9GZZ9 404 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 GPCPD1Q9NPB8 672 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 PPP2R3BQ9Y5P8 575 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 F5H6K3 240 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 VEGFAP15692 232 aaPredicted RBP12.99□□□□□ -0.33
APTX-223ENST00000479656 ECE1P42892 770 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 KLRC3Q07444 240 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 RESTQ13127 1097 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 DCAF15Q66K64 600 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 SLFN13Q68D06 897 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 CCDC84Q86UT8 332 aaPredicted RBP12.99□□□□□ -0.33
APTX-223ENST00000479656 ACER1Q8TDN7 264 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 LZTS2Q9BRK4 669 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 VAT1LQ9HCJ6 419 aa12.99□□□□□ -0.33
APTX-223ENST00000479656 ADM5C9JUS6 153 aa12.98□□□□□ -0.33
APTX-223ENST00000479656 ASNSP08243 561 aa12.98□□□□□ -0.33
APTX-223ENST00000479656 INPP5BP32019 993 aa12.98□□□□□ -0.33
APTX-223ENST00000479656 ZNF543Q08ER8 600 aa12.98□□□□□ -0.33
APTX-223ENST00000479656 TRIM29Q14134 588 aa12.98□□□□□ -0.33
APTX-223ENST00000479656 SUPT20HL1Q3ZLR7 823 aa12.98□□□□□ -0.33
APTX-223ENST00000479656 EAPPQ56P03 285 aaPredicted RBP12.98□□□□□ -0.33
APTX-223ENST00000479656 KCTD1Q719H9 257 aa12.98□□□□□ -0.33
APTX-223ENST00000479656 SULF1Q8IWU6 871 aa12.98□□□□□ -0.33
APTX-223ENST00000479656 HOOK2Q96ED9 719 aa12.98□□□□□ -0.33
APTX-223ENST00000479656 ZNF341Q9BYN7 854 aa12.98□□□□□ -0.33
APTX-223ENST00000479656 TAF1DQ9H5J8 278 aaPredicted RBP12.98□□□□□ -0.33
APTX-223ENST00000479656 ATP6V1DQ9Y5K8 247 aa12.98□□□□□ -0.33
APTX-223ENST00000479656 POLR2AP24928 1970 aaKnown RBP12.98□□□□□ -0.33
APTX-223ENST00000479656 IQCA1LA6NCM1 817 aa12.97□□□□□ -0.33
APTX-223ENST00000479656 CTNND1O60716 968 aaKnown RBP12.97□□□□□ -0.33
APTX-223ENST00000479656 DNM1Q05193 864 aaKnown RBP12.97□□□□□ -0.33
APTX-223ENST00000479656 CCDC96Q2M329 555 aa12.97□□□□□ -0.33
APTX-223ENST00000479656 ASPRV1Q53RT3 343 aa12.97□□□□□ -0.33
APTX-223ENST00000479656 TTBK2Q6IQ55 1244 aa12.97□□□□□ -0.33
APTX-223ENST00000479656 ZSCAN16Q9H4T2 348 aaPredicted RBP12.97□□□□□ -0.33
APTX-223ENST00000479656 ARHGEF10LQ9HCE6 1279 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms