RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 PTPREP23469 700 aa11.97□□□□□ -0.49
GPNMB-211ENST00000479625 MVPQ14764 893 aaKnown RBP11.97□□□□□ -0.49
GPNMB-211ENST00000479625 CRACR2BQ8N4Y2 399 aaPredicted RBP11.97□□□□□ -0.49
GPNMB-211ENST00000479625 SYMPKQ92797 1274 aaKnown RBP11.97□□□□□ -0.49
GPNMB-211ENST00000479625 COPRSQ9NQ92 184 aa11.97□□□□□ -0.49
GPNMB-211ENST00000479625 SAP30BPQ9UHR5 308 aaKnown RBP11.97□□□□□ -0.49
GPNMB-211ENST00000479625 ZNF521Q96K83 1311 aa11.96□□□□□ -0.49
GPNMB-211ENST00000479625 TRIM43BA6NCK2 446 aa11.96□□□□□ -0.49
GPNMB-211ENST00000479625 MSCO60682 206 aa11.96□□□□□ -0.49
GPNMB-211ENST00000479625 MAP4K4O95819 1239 aaPredicted RBP11.96□□□□□ -0.49
GPNMB-211ENST00000479625 LDHCP07864 332 aa11.96□□□□□ -0.49
GPNMB-211ENST00000479625 MCAMP43121 646 aa11.96□□□□□ -0.49
GPNMB-211ENST00000479625 EPHB4P54760 987 aa11.96□□□□□ -0.49
GPNMB-211ENST00000479625 GRB14Q14449 540 aa11.96□□□□□ -0.49
GPNMB-211ENST00000479625 SLC39A5Q6ZMH5 540 aa11.96□□□□□ -0.49
GPNMB-211ENST00000479625 ADGRA1Q86SQ6 560 aa11.96□□□□□ -0.49
GPNMB-211ENST00000479625 GTF3C2Q8WUA4 911 aaPredicted RBP11.96□□□□□ -0.49
GPNMB-211ENST00000479625 TGFBRAP1Q8WUH2 860 aa11.96□□□□□ -0.49
GPNMB-211ENST00000479625 TRIM43Q96BQ3 446 aaPredicted RBP11.96□□□□□ -0.49
GPNMB-211ENST00000479625 NEUROD6Q96NK8 337 aa11.96□□□□□ -0.49
GPNMB-211ENST00000479625 BTBD7Q9P203 1132 aa11.96□□□□□ -0.49
GPNMB-211ENST00000479625 PALD1Q9ULE6 856 aa11.96□□□□□ -0.49
GPNMB-211ENST00000479625 RABGAP1Q9Y3P9 1069 aa11.96□□□□□ -0.49
GPNMB-211ENST00000479625 SMCHD1A6NHR9 2005 aa11.96□□□□□ -0.5
GPNMB-211ENST00000479625 SLC15A5A6NIM6 579 aa11.95□□□□□ -0.5
GPNMB-211ENST00000479625 TNFRSF10AO00220 468 aa11.95□□□□□ -0.5
GPNMB-211ENST00000479625 GH2P01242 217 aa11.95□□□□□ -0.5
GPNMB-211ENST00000479625 ITGB8P26012 769 aa11.95□□□□□ -0.5
GPNMB-211ENST00000479625 ATP2B2Q01814 1243 aa11.95□□□□□ -0.5
GPNMB-211ENST00000479625 GRIN2CQ14957 1233 aa11.95□□□□□ -0.5
GPNMB-211ENST00000479625 SNX17Q15036 470 aa11.95□□□□□ -0.5
GPNMB-211ENST00000479625 TJAP1Q5JTD0 557 aa11.95□□□□□ -0.5
GPNMB-211ENST00000479625 USP17L2Q6R6M4 530 aa11.95□□□□□ -0.5
GPNMB-211ENST00000479625 METTL16Q86W50 562 aaKnown RBP11.95□□□□□ -0.5
GPNMB-211ENST00000479625 FERMT2Q96AC1 680 aa11.95□□□□□ -0.5
GPNMB-211ENST00000479625 MEIS3Q99687 375 aa11.95□□□□□ -0.5
GPNMB-211ENST00000479625 FEZ1Q99689 392 aa11.95□□□□□ -0.5
GPNMB-211ENST00000479625 TRIM34Q9BYJ4 488 aa11.95□□□□□ -0.5
GPNMB-211ENST00000479625 DHX36Q9H2U1 1008 aaKnown RBP11.95□□□□□ -0.5
GPNMB-211ENST00000479625 ZSWIM6Q9HCJ5 1215 aa11.95□□□□□ -0.5
GPNMB-211ENST00000479625 CHD7Q9P2D1 2997 aa11.94□□□□□ -0.5
GPNMB-211ENST00000479625 KBTBD13C9JR72 458 aa11.94□□□□□ -0.5
GPNMB-211ENST00000479625 GLRX3O76003 335 aaKnown RBP11.94□□□□□ -0.5
GPNMB-211ENST00000479625 IGHA2P01877 340 aa11.94□□□□□ -0.5
GPNMB-211ENST00000479625 HOXC6P09630 235 aa11.94□□□□□ -0.5
GPNMB-211ENST00000479625 ARID4AP29374 1257 aaPredicted RBP11.94□□□□□ -0.5
GPNMB-211ENST00000479625 ADCYAP1R1P41586 468 aa11.94□□□□□ -0.5
GPNMB-211ENST00000479625 CCNA1P78396 465 aa11.94□□□□□ -0.5
GPNMB-211ENST00000479625 C12orf42Q96LP6 360 aa11.94□□□□□ -0.5
GPNMB-211ENST00000479625 RNPC3Q96LT9 517 aaKnown RBP11.94□□□□□ -0.5
GPNMB-211ENST00000479625 NOL10Q9BSC4 688 aaKnown RBP11.94□□□□□ -0.5
GPNMB-211ENST00000479625 LRP2BPQ9P2M1 347 aa11.94□□□□□ -0.5
GPNMB-211ENST00000479625 IVNS1ABPQ9Y6Y0 642 aa11.94□□□□□ -0.5
GPNMB-211ENST00000479625 SPDYE16A6NNV3 312 aaPredicted RBP11.93□□□□□ -0.5
GPNMB-211ENST00000479625 USP17L15C9J2P7 530 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 USP17L13C9JLJ4 530 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 USP17L11C9JVI0 530 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 USP17L18D6R9N7 530 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 USP17L22D6RA61 530 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 USP17L17D6RBQ6 530 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 USP17L19D6RCP7 530 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 USP17L20D6RJB6 530 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 VCAM1P19320 739 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 USP17L24Q0WX57 530 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 ARSIQ5FYB1 569 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 FAM47AQ5JRC9 791 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 VARS2Q5ST30 1063 aaKnown RBP11.93□□□□□ -0.5
GPNMB-211ENST00000479625 GORABQ5T7V8 394 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 NAA16Q6N069 864 aaPredicted RBP11.93□□□□□ -0.5
GPNMB-211ENST00000479625 FAM9BQ8IZU0 186 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 SNRKQ9NRH2 765 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 SMC4Q9NTJ3 1288 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 AKAP2Q9Y2D5 859 aa11.93□□□□□ -0.5
GPNMB-211ENST00000479625 TCF20Q9UGU0 1960 aaKnown RBP11.92□□□□□ -0.5
GPNMB-211ENST00000479625 TMEM265A0A087WTH1 108 aa11.92□□□□□ -0.5
GPNMB-211ENST00000479625 SRGAP3O43295 1099 aa11.92□□□□□ -0.5
GPNMB-211ENST00000479625 DNAJB2P25686 324 aa11.92□□□□□ -0.5
GPNMB-211ENST00000479625 ADORA2AP29274 412 aa11.92□□□□□ -0.5
GPNMB-211ENST00000479625 DYNLL1P63167 89 aaKnown RBP11.92□□□□□ -0.5
GPNMB-211ENST00000479625 TLE2Q04725 743 aa11.92□□□□□ -0.5
GPNMB-211ENST00000479625 PRAMEF19Q5SWL8 479 aa11.92□□□□□ -0.5
GPNMB-211ENST00000479625 CATSPERGQ6ZRH7 1159 aa11.92□□□□□ -0.5
GPNMB-211ENST00000479625 FOXP4Q8IVH2 680 aaPredicted RBP11.92□□□□□ -0.5
GPNMB-211ENST00000479625 ARRDC4Q8NCT1 418 aa11.92□□□□□ -0.5
GPNMB-211ENST00000479625 ACER1Q8TDN7 264 aa11.92□□□□□ -0.5
GPNMB-211ENST00000479625 PPM1EQ8WY54 764 aa11.92□□□□□ -0.5
GPNMB-211ENST00000479625 KHSRPQ92945 711 aaKnown RBP eCLIP11.92□□□□□ -0.5
GPNMB-211ENST00000479625 SEPT4O43236 478 aa11.91□□□□□ -0.5
GPNMB-211ENST00000479625 BAG3O95817 575 aa11.91□□□□□ -0.5
GPNMB-211ENST00000479625 RAB3GAP1Q15042 981 aa11.91□□□□□ -0.5
GPNMB-211ENST00000479625 LRRC41Q15345 812 aa11.91□□□□□ -0.5
GPNMB-211ENST00000479625 DPP9Q86TI2 863 aa11.91□□□□□ -0.5
GPNMB-211ENST00000479625 RPAP3Q9H6T3 665 aaPredicted RBP11.91□□□□□ -0.5
GPNMB-211ENST00000479625 GINM1Q9NU53 330 aa11.91□□□□□ -0.5
GPNMB-211ENST00000479625 TRANK1O15050 2925 aa11.9□□□□□ -0.5
GPNMB-211ENST00000479625 COBLO75128 1261 aa11.9□□□□□ -0.5
GPNMB-211ENST00000479625 HLA-DOAP06340 250 aa11.9□□□□□ -0.5
GPNMB-211ENST00000479625 CLTBP09497 229 aa11.9□□□□□ -0.5
GPNMB-211ENST00000479625 PLA2G5P39877 138 aa11.9□□□□□ -0.5
GPNMB-211ENST00000479625 PPP4CP60510 307 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms