RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 BMP8BP34820 402 aa10.62□□□□□ -0.71
DDX56-211ENST00000479602 NMIQ13287 307 aaPredicted RBP10.62□□□□□ -0.71
DDX56-211ENST00000479602 LHX8Q68G74 356 aa10.62□□□□□ -0.71
DDX56-211ENST00000479602 CASC1Q6TDU7 716 aa10.62□□□□□ -0.71
DDX56-211ENST00000479602 GPRC5AQ8NFJ5 357 aa10.62□□□□□ -0.71
DDX56-211ENST00000479602 DIS3LQ8TF46 1054 aaKnown RBP10.62□□□□□ -0.71
DDX56-211ENST00000479602 IL17RAQ96F46 866 aa10.62□□□□□ -0.71
DDX56-211ENST00000479602 GDF15Q99988 308 aa10.62□□□□□ -0.71
DDX56-211ENST00000479602 NACAP1Q9BZK3 213 aa10.62□□□□□ -0.71
DDX56-211ENST00000479602 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.62□□□□□ -0.719e-6■■□□□ 13.2
DDX56-211ENST00000479602 PLIN4Q96Q06 1357 aa10.62□□□□□ -0.71
DDX56-211ENST00000479602 DNAH12Q6ZR08 3092 aa10.61□□□□□ -0.71
DDX56-211ENST00000479602 PATL2C9JE40 543 aaKnown RBP10.61□□□□□ -0.71
DDX56-211ENST00000479602 GDF11O95390 407 aa10.61□□□□□ -0.71
DDX56-211ENST00000479602 CATSPERGQ6ZRH7 1159 aa10.61□□□□□ -0.71
DDX56-211ENST00000479602 TTC6Q86TZ1 520 aa10.61□□□□□ -0.71
DDX56-211ENST00000479602 IL27Q8NEV9 243 aa10.61□□□□□ -0.71
DDX56-211ENST00000479602 RILPL2Q969X0 211 aa10.61□□□□□ -0.71
DDX56-211ENST00000479602 DDRGK1Q96HY6 314 aa10.61□□□□□ -0.71
DDX56-211ENST00000479602 PORCNQ9H237 461 aa10.61□□□□□ -0.71
DDX56-211ENST00000479602 SWAP70Q9UH65 585 aa10.61□□□□□ -0.71
DDX56-211ENST00000479602 SYNPO2Q9UMS6 1093 aa10.61□□□□□ -0.71
DDX56-211ENST00000479602 LOC285556D6RIA3 1793 aa10.61□□□□□ -0.71
DDX56-211ENST00000479602 LAMA2P24043 3122 aaKnown RBP10.61□□□□□ -0.71
DDX56-211ENST00000479602 BAZ2AQ9UIF9 1905 aaKnown RBP10.6□□□□□ -0.71
DDX56-211ENST00000479602 M0R2C6 588 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 GH2P01242 217 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 HSPD1P10809 573 aaKnown RBP10.6□□□□□ -0.71
DDX56-211ENST00000479602 MAPK4P31152 587 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 SHMT1P34896 483 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 PLCD1P51178 756 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 ERVK-9P63128 1117 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 ERVK-24P63145 666 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 C12orf60Q5U649 245 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 USP17L2Q6R6M4 530 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 NECAB2Q7Z6G3 386 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 ZNF589Q86UQ0 364 aaPredicted RBP10.6□□□□□ -0.71
DDX56-211ENST00000479602 SIAH1Q8IUQ4 282 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 MIGA1Q8NAN2 632 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 GTF3C2Q8WUA4 911 aaPredicted RBP10.6□□□□□ -0.71
DDX56-211ENST00000479602 MAP4K1Q92918 833 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 FAM227BQ96M60 508 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 ESYT1Q9BSJ8 1104 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 KIAA1683Q9H0B3 1180 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 ARMT1Q9H993 441 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 EPB41L4AQ9HCS5 686 aaPredicted RBP10.6□□□□□ -0.71
DDX56-211ENST00000479602 HMX1Q9NP08 348 aaPredicted RBP10.6□□□□□ -0.71
DDX56-211ENST00000479602 TMOD4Q9NZQ9 345 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 SERPINB13Q9UIV8 391 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 RABGAP1Q9Y3P9 1069 aa10.6□□□□□ -0.71
DDX56-211ENST00000479602 PLXNB2O15031 1838 aa10.59□□□□□ -0.71
DDX56-211ENST00000479602 SOX1O00570 391 aaPredicted RBP10.59□□□□□ -0.71
DDX56-211ENST00000479602 EVI5O60447 810 aa10.59□□□□□ -0.71
DDX56-211ENST00000479602 HLA-DOAP06340 250 aa10.59□□□□□ -0.71
DDX56-211ENST00000479602 HOXC6P09630 235 aa10.59□□□□□ -0.71
DDX56-211ENST00000479602 IRX3P78415 501 aaPredicted RBP10.59□□□□□ -0.71
DDX56-211ENST00000479602 CACNB2Q08289 660 aaPredicted RBP10.59□□□□□ -0.71
DDX56-211ENST00000479602 TSGA10IPQ3SY00 556 aa10.59□□□□□ -0.71
DDX56-211ENST00000479602 GPR142Q7Z601 462 aa10.59□□□□□ -0.71
DDX56-211ENST00000479602 AMOTL1Q8IY63 956 aa10.59□□□□□ -0.71
DDX56-211ENST00000479602 TRMT44Q8IYL2 757 aaKnown RBP10.59□□□□□ -0.71
DDX56-211ENST00000479602 IFNL3Q8IZI9 196 aa10.59□□□□□ -0.71
DDX56-211ENST00000479602 ACER1Q8TDN7 264 aa10.59□□□□□ -0.71
DDX56-211ENST00000479602 SOCS4Q8WXH5 440 aa10.59□□□□□ -0.71
DDX56-211ENST00000479602 NUDT12Q9BQG2 462 aa10.59□□□□□ -0.71
DDX56-211ENST00000479602 MTA3Q9BTC8 594 aa10.59□□□□□ -0.71
DDX56-211ENST00000479602 NBPF3Q9H094 633 aa10.59□□□□□ -0.71
DDX56-211ENST00000479602 ZNF287Q9HBT7 754 aa10.59□□□□□ -0.71
DDX56-211ENST00000479602 SAP30BPQ9UHR5 308 aaKnown RBP10.59□□□□□ -0.71
DDX56-211ENST00000479602 CTNNA3Q9UI47 895 aa10.59□□□□□ -0.71
DDX56-211ENST00000479602 SLC4A4Q9Y6R1 1079 aa10.59□□□□□ -0.71
DDX56-211ENST00000479602 PFASO15067 1338 aa10.58□□□□□ -0.71
DDX56-211ENST00000479602 MYH8P13535 1937 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 A0A1W2PRG0 241 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 USP17L15C9J2P7 530 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 USP17L13C9JLJ4 530 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 USP17L11C9JVI0 530 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 USP17L18D6R9N7 530 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 USP17L22D6RA61 530 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 USP17L17D6RBQ6 530 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 USP17L19D6RCP7 530 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 USP17L20D6RJB6 530 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 ORC4O43929 436 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 REC8O95072 547 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 CYP2B6P20813 491 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 USP5P45974 858 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 EVX2Q03828 476 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 USP17L24Q0WX57 530 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 CWC27Q6UX04 472 aaKnown RBP10.58□□□□□ -0.72
DDX56-211ENST00000479602 C16orf86Q6ZW13 317 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 PLEKHH3Q7Z736 793 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 KCNB2Q92953 911 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 CCDC17Q96LX7 622 aa10.58□□□□□ -0.72
DDX56-211ENST00000479602 SEC62Q99442 399 aaKnown RBP10.58□□□□□ -0.72
DDX56-211ENST00000479602 CHGBP05060 677 aa10.57□□□□□ -0.72
DDX56-211ENST00000479602 PRKAR2AP13861 404 aaKnown RBP10.57□□□□□ -0.72
DDX56-211ENST00000479602 VCAM1P19320 739 aa10.57□□□□□ -0.72
DDX56-211ENST00000479602 NOVP48745 357 aa10.57□□□□□ -0.72
DDX56-211ENST00000479602 CCL14Q16627 93 aa10.57□□□□□ -0.72
DDX56-211ENST00000479602 CERKLQ49MI3 558 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms