RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 HSF2BPO75031 334 aa16.05■□□□□ 0.16
COL20A1-206ENST00000479501 DPCR1Q3MIW9 517 aa16.05■□□□□ 0.16
COL20A1-206ENST00000479501 LRRC8AQ8IWT6 810 aa16.05■□□□□ 0.16
COL20A1-206ENST00000479501 PLCD3Q8N3E9 789 aa16.05■□□□□ 0.16
COL20A1-206ENST00000479501 LEMD3Q9Y2U8 911 aa16.05■□□□□ 0.16
COL20A1-206ENST00000479501 REREQ9P2R6 1566 aa16.05■□□□□ 0.16
COL20A1-206ENST00000479501 A0A087WWV3 80 aa16.05■□□□□ 0.16
COL20A1-206ENST00000479501 CLEC4GQ6UXB4 293 aa16.05■□□□□ 0.16
COL20A1-206ENST00000479501 C11orf57Q6ZUT1 292 aaPredicted RBP16.05■□□□□ 0.16
COL20A1-206ENST00000479501 NELFBQ8WX92 580 aa16.05■□□□□ 0.16
COL20A1-206ENST00000479501 PALLDQ8WX93 1383 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 KRT13P13646 458 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 GBP2P32456 591 aaPredicted RBP16.04■□□□□ 0.16
COL20A1-206ENST00000479501 TCP10Q12799 353 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 TTC31Q49AM3 519 aaPredicted RBP16.04■□□□□ 0.16
COL20A1-206ENST00000479501 FCHSD1Q86WN1 690 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 ATRIPQ8WXE1 791 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 NRBP1Q9UHY1 535 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 THRAP3Q9Y2W1 955 aaKnown RBP16.04■□□□□ 0.16
COL20A1-206ENST00000479501 DIP2BQ9P265 1576 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 EVCP57679 992 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 USP40Q9NVE5 1235 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 BTDP43251 543 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 CALCRLQ16602 461 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 INF2Q27J81 1249 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 TMTC1Q8IUR5 882 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 GPKOWQ92917 476 aaPredicted RBP eCLIP16.04■□□□□ 0.16
COL20A1-206ENST00000479501 IL25Q9H293 177 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 PYCARDQ9ULZ3 195 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 ATP2C2O75185 946 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 NR5A1Q13285 461 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 PDIA6Q15084 440 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 CCDC174Q6PII3 467 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 CYP26C1Q6V0L0 522 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 TBC1D5Q92609 795 aa16.04■□□□□ 0.16
COL20A1-206ENST00000479501 CEP170BQ9Y4F5 1589 aaPredicted RBP16.04■□□□□ 0.16
COL20A1-206ENST00000479501 GOLGA8HP0CJ92 632 aa16.03■□□□□ 0.16
COL20A1-206ENST00000479501 ALDH1B1P30837 517 aa16.03■□□□□ 0.16
COL20A1-206ENST00000479501 FAM182BQ5T319 152 aa16.03■□□□□ 0.16
COL20A1-206ENST00000479501 FAM196AQ6ZSG2 479 aa16.03■□□□□ 0.16
COL20A1-206ENST00000479501 ALDH8A1Q9H2A2 487 aaPredicted RBP16.03■□□□□ 0.16
COL20A1-206ENST00000479501 BCL2L12Q9HB09 334 aa16.03■□□□□ 0.16
COL20A1-206ENST00000479501 XDHP47989 1333 aa16.03■□□□□ 0.16
COL20A1-206ENST00000479501 GSTTP1A0A1W2PQM5 241 aa16.03■□□□□ 0.16
COL20A1-206ENST00000479501 GJB4Q9NTQ9 266 aa16.03■□□□□ 0.16
COL20A1-206ENST00000479501 H0YIN7 160 aa16.03■□□□□ 0.16
COL20A1-206ENST00000479501 MMP1P03956 469 aa16.03■□□□□ 0.16
COL20A1-206ENST00000479501 NF2P35240 595 aa16.03■□□□□ 0.16
COL20A1-206ENST00000479501 JDP2Q8WYK2 163 aa16.03■□□□□ 0.16
COL20A1-206ENST00000479501 GCOM1H8Y6P7 765 aaPredicted RBP16.02■□□□□ 0.16
COL20A1-206ENST00000479501 MYZAPP0CAP1 466 aa16.02■□□□□ 0.16
COL20A1-206ENST00000479501 ADKP55263 362 aaKnown RBP16.02■□□□□ 0.16
COL20A1-206ENST00000479501 RBM26Q5T8P6 1007 aaKnown RBP16.02■□□□□ 0.16
COL20A1-206ENST00000479501 DYMQ7RTS9 669 aa16.02■□□□□ 0.16
COL20A1-206ENST00000479501 BSDC1Q9NW68 430 aaPredicted RBP16.02■□□□□ 0.16
COL20A1-206ENST00000479501 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.02■□□□□ 0.16
COL20A1-206ENST00000479501 RPL13P26373 211 aaKnown RBP16.02■□□□□ 0.16
COL20A1-206ENST00000479501 HAUS3Q68CZ6 603 aa16.02■□□□□ 0.16
COL20A1-206ENST00000479501 TEKT1Q969V4 418 aa16.02■□□□□ 0.16
COL20A1-206ENST00000479501 CAPZA3Q96KX2 299 aa16.02■□□□□ 0.16
COL20A1-206ENST00000479501 CARD6Q9BX69 1037 aa16.02■□□□□ 0.16
COL20A1-206ENST00000479501 BIN2Q9UBW5 565 aaPredicted RBP16.02■□□□□ 0.16
COL20A1-206ENST00000479501 TUBBP07437 444 aa16.02■□□□□ 0.15
COL20A1-206ENST00000479501 SCARF1Q14162 830 aa16.02■□□□□ 0.15
COL20A1-206ENST00000479501 CSRNP2Q9H175 543 aa16.02■□□□□ 0.15
COL20A1-206ENST00000479501 CYP2D7A0A087X1C5 515 aa16.02■□□□□ 0.15
COL20A1-206ENST00000479501 RHOXF2BP0C7M4 288 aa16.02■□□□□ 0.15
COL20A1-206ENST00000479501 ELF2Q15723 593 aa16.02■□□□□ 0.15
COL20A1-206ENST00000479501 NBPF11Q86T75 865 aa16.02■□□□□ 0.15
COL20A1-206ENST00000479501 TBC1D10CQ8IV04 446 aa16.02■□□□□ 0.15
COL20A1-206ENST00000479501 SYMPKQ92797 1274 aaKnown RBP16.02■□□□□ 0.15
COL20A1-206ENST00000479501 PGBD1Q96JS3 809 aa16.02■□□□□ 0.15
COL20A1-206ENST00000479501 RHOXF2Q9BQY4 288 aa16.02■□□□□ 0.15
COL20A1-206ENST00000479501 PPP2R3AQ06190 1150 aa16.01■□□□□ 0.15
COL20A1-206ENST00000479501 GALNT17Q6IS24 598 aa16.01■□□□□ 0.15
COL20A1-206ENST00000479501 HERC4Q5GLZ8 1057 aaPredicted RBP16.01■□□□□ 0.15
COL20A1-206ENST00000479501 SRP68Q9UHB9 627 aaKnown RBP16.01■□□□□ 0.15
COL20A1-206ENST00000479501 OPA1O60313 960 aa16.01■□□□□ 0.15
COL20A1-206ENST00000479501 TTLL12Q14166 644 aaPredicted RBP16.01■□□□□ 0.15
COL20A1-206ENST00000479501 OTUD6BQ8N6M0 293 aa16.01■□□□□ 0.15
COL20A1-206ENST00000479501 SH2D4AQ9H788 454 aa16.01■□□□□ 0.15
COL20A1-206ENST00000479501 UTYO14607 1347 aa16.01■□□□□ 0.15
COL20A1-206ENST00000479501 NUP58Q9BVL2 599 aa16■□□□□ 0.15
COL20A1-206ENST00000479501 ARHGEF10LQ9HCE6 1279 aa16■□□□□ 0.15
COL20A1-206ENST00000479501 SOS2Q07890 1332 aaPredicted RBP16■□□□□ 0.15
COL20A1-206ENST00000479501 MB21D2Q8IYB1 491 aaPredicted RBP16■□□□□ 0.15
COL20A1-206ENST00000479501 BICD1Q96G01 975 aa16■□□□□ 0.15
COL20A1-206ENST00000479501 RIPOR2Q9Y4F9 1068 aa16■□□□□ 0.15
COL20A1-206ENST00000479501 USP37Q86T82 979 aa16■□□□□ 0.15
COL20A1-206ENST00000479501 CACTINQ8WUQ7 758 aaKnown RBP16■□□□□ 0.15
COL20A1-206ENST00000479501 MACROD2A1Z1Q3 448 aa16■□□□□ 0.15
COL20A1-206ENST00000479501 TRAPPC10P48553 1259 aa16■□□□□ 0.15
COL20A1-206ENST00000479501 SPATA1Q5VX52 437 aa16■□□□□ 0.15
COL20A1-206ENST00000479501 STOX1Q6ZVD7 989 aa16■□□□□ 0.15
COL20A1-206ENST00000479501 NAPGQ99747 312 aaPredicted RBP16■□□□□ 0.15
COL20A1-206ENST00000479501 ITSN1Q15811 1721 aa15.99■□□□□ 0.15
COL20A1-206ENST00000479501 IKBKBO14920 756 aa15.99■□□□□ 0.15
COL20A1-206ENST00000479501 CETN3O15182 167 aa15.99■□□□□ 0.15
COL20A1-206ENST00000479501 GTPBP6O43824 516 aaPredicted RBP15.99■□□□□ 0.15
COL20A1-206ENST00000479501 NEK8Q86SG6 692 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms