RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 VCAM1P19320 739 aa29.5■■■□□ 2.31
PERM1-203ENST00000479361 HOXA7P31268 230 aaPredicted RBP29.5■■■□□ 2.31
PERM1-203ENST00000479361 CREB3L3Q68CJ9 461 aa29.5■■■□□ 2.31
PERM1-203ENST00000479361 RALYLQ86SE5 291 aaKnown RBP29.5■■■□□ 2.31
PERM1-203ENST00000479361 E7EWF7 191 aa29.49■■■□□ 2.31
PERM1-203ENST00000479361 EIF5BO60841 1220 aaKnown RBP29.49■■■□□ 2.31
PERM1-203ENST00000479361 CCDC178Q5BJE1 867 aa29.49■■■□□ 2.31
PERM1-203ENST00000479361 NOM1Q5C9Z4 860 aaKnown RBP29.49■■■□□ 2.31
PERM1-203ENST00000479361 USP17L15C9J2P7 530 aa29.48■■■□□ 2.31
PERM1-203ENST00000479361 USP17L13C9JLJ4 530 aa29.48■■■□□ 2.31
PERM1-203ENST00000479361 USP17L11C9JVI0 530 aa29.48■■■□□ 2.31
PERM1-203ENST00000479361 USP17L18D6R9N7 530 aa29.48■■■□□ 2.31
PERM1-203ENST00000479361 USP17L22D6RA61 530 aa29.48■■■□□ 2.31
PERM1-203ENST00000479361 USP17L17D6RBQ6 530 aa29.48■■■□□ 2.31
PERM1-203ENST00000479361 USP17L19D6RCP7 530 aa29.48■■■□□ 2.31
PERM1-203ENST00000479361 USP17L20D6RJB6 530 aa29.48■■■□□ 2.31
PERM1-203ENST00000479361 EPB41L2O43491 1005 aaKnown RBP29.48■■■□□ 2.31
PERM1-203ENST00000479361 NMT2O60551 498 aa29.48■■■□□ 2.31
PERM1-203ENST00000479361 TLR2O60603 784 aa29.48■■■□□ 2.31
PERM1-203ENST00000479361 IRX3P78415 501 aaPredicted RBP29.48■■■□□ 2.31
PERM1-203ENST00000479361 USP17L24Q0WX57 530 aa29.48■■■□□ 2.31
PERM1-203ENST00000479361 NCOA7Q8NI08 942 aa29.48■■■□□ 2.31
PERM1-203ENST00000479361 SMCR8Q8TEV9 937 aaPredicted RBP29.48■■■□□ 2.31
PERM1-203ENST00000479361 ZSWIM5Q9P217 1185 aa29.48■■■□□ 2.31
PERM1-203ENST00000479361 CYP2C8P10632 490 aa29.47■■■□□ 2.31
PERM1-203ENST00000479361 NOVP48745 357 aa29.47■■■□□ 2.31
PERM1-203ENST00000479361 TTC14Q96N46 770 aa29.47■■■□□ 2.31
PERM1-203ENST00000479361 ASCC2Q9H1I8 757 aaPredicted RBP29.47■■■□□ 2.31
PERM1-203ENST00000479361 RPAP3Q9H6T3 665 aaPredicted RBP29.47■■■□□ 2.31
PERM1-203ENST00000479361 WDR46O15213 610 aaKnown RBP29.46■■■□□ 2.31
PERM1-203ENST00000479361 RAD21O60216 631 aa29.46■■■□□ 2.31
PERM1-203ENST00000479361 ZKSCAN1P17029 563 aaPredicted RBP29.46■■■□□ 2.31
PERM1-203ENST00000479361 LBX1P52954 281 aa29.46■■■□□ 2.31
PERM1-203ENST00000479361 SPICE1Q8N0Z3 855 aa29.46■■■□□ 2.31
PERM1-203ENST00000479361 LRRC47Q8N1G4 583 aaKnown RBP29.46■■■□□ 2.31
PERM1-203ENST00000479361 R3HDMLQ9H3Y0 253 aa29.46■■■□□ 2.31
PERM1-203ENST00000479361 TAF6LQ9Y6J9 622 aa29.46■■■□□ 2.31
PERM1-203ENST00000479361 F5H6K3 240 aa29.45■■■□□ 2.31
PERM1-203ENST00000479361 GPR25O00155 361 aa29.45■■■□□ 2.31
PERM1-203ENST00000479361 KLRC3Q07444 240 aa29.45■■■□□ 2.31
PERM1-203ENST00000479361 GMCL1P1Q8NEA9 526 aa29.45■■■□□ 2.31
PERM1-203ENST00000479361 UBAC1Q9BSL1 405 aa29.45■■■□□ 2.31
PERM1-203ENST00000479361 TOP1P11387 765 aaKnown RBP29.44■■■□□ 2.3
PERM1-203ENST00000479361 KIAA1755Q5JYT7 1200 aa29.44■■■□□ 2.3
PERM1-203ENST00000479361 CATSPERGQ6ZRH7 1159 aa29.44■■■□□ 2.3
PERM1-203ENST00000479361 STOX1Q6ZVD7 989 aa29.44■■■□□ 2.3
PERM1-203ENST00000479361 NKX2-3Q8TAU0 364 aa29.44■■■□□ 2.3
PERM1-203ENST00000479361 ZSCAN10Q96SZ4 725 aaPredicted RBP29.44■■■□□ 2.3
PERM1-203ENST00000479361 TANGO6Q9C0B7 1094 aa29.44■■■□□ 2.3
PERM1-203ENST00000479361 NDUFB10O96000 172 aa29.43■■■□□ 2.3
PERM1-203ENST00000479361 DGKHQ86XP1 1220 aa29.43■■■□□ 2.3
PERM1-203ENST00000479361 ZKSCAN3Q9BRR0 538 aa29.43■■■□□ 2.3
PERM1-203ENST00000479361 GCLCP48506 637 aaPredicted RBP29.42■■■□□ 2.3
PERM1-203ENST00000479361 GTF3C2Q8WUA4 911 aaPredicted RBP29.42■■■□□ 2.3
PERM1-203ENST00000479361 PRDM10Q9NQV6 1147 aa29.42■■■□□ 2.3
PERM1-203ENST00000479361 ADGRA2Q96PE1 1338 aa29.42■■■□□ 2.3
PERM1-203ENST00000479361 MYH4Q9Y623 1939 aa29.41■■■□□ 2.3
PERM1-203ENST00000479361 FKTNO75072 461 aa29.41■■■□□ 2.3
PERM1-203ENST00000479361 HSPA4P34932 840 aa29.41■■■□□ 2.3
PERM1-203ENST00000479361 KRT32Q14532 448 aa29.41■■■□□ 2.3
PERM1-203ENST00000479361 SART3Q15020 963 aaKnown RBP29.41■■■□□ 2.3
PERM1-203ENST00000479361 TSGA10IPQ3SY00 556 aa29.41■■■□□ 2.3
PERM1-203ENST00000479361 C17orf99Q6UX52 265 aa29.41■■■□□ 2.3
PERM1-203ENST00000479361 TMEM47Q9BQJ4 181 aa29.41■■■□□ 2.3
PERM1-203ENST00000479361 HERVK_113P62684 666 aa29.4■■■□□ 2.3
PERM1-203ENST00000479361 COG2Q14746 738 aa29.4■■■□□ 2.3
PERM1-203ENST00000479361 SLFN13Q68D06 897 aa29.4■■■□□ 2.3
PERM1-203ENST00000479361 RCSD1Q6JBY9 416 aa29.4■■■□□ 2.3
PERM1-203ENST00000479361 CYB5R4Q7L1T6 521 aa29.4■■■□□ 2.3
PERM1-203ENST00000479361 ZNF296Q8WUU4 475 aaPredicted RBP29.4■■■□□ 2.3
PERM1-203ENST00000479361 P2RX7Q99572 595 aaKnown RBP29.4■■■□□ 2.3
PERM1-203ENST00000479361 CPA4Q9UI42 421 aa29.4■■■□□ 2.3
PERM1-203ENST00000479361 TNKSO95271 1327 aa29.4■■■□□ 2.3
PERM1-203ENST00000479361 ERICH2A1L162 156 aa29.39■■■□□ 2.3
PERM1-203ENST00000479361 MCCP23508 829 aa29.39■■■□□ 2.3
PERM1-203ENST00000479361 SP3Q02447 781 aa29.39■■■□□ 2.3
PERM1-203ENST00000479361 FAM83BQ5T0W9 1011 aa29.39■■■□□ 2.3
PERM1-203ENST00000479361 MB21D2Q8IYB1 491 aaPredicted RBP29.39■■■□□ 2.3
PERM1-203ENST00000479361 ENAHQ8N8S7 591 aaPredicted RBP29.39■■■□□ 2.3
PERM1-203ENST00000479361 ANKS1AQ92625 1134 aa29.39■■■□□ 2.3
PERM1-203ENST00000479361 GMCL1Q96IK5 515 aa29.39■■■□□ 2.3
PERM1-203ENST00000479361 USP26Q9BXU7 913 aa29.39■■■□□ 2.3
PERM1-203ENST00000479361 HOXC10Q9NYD6 342 aa29.39■■■□□ 2.3
PERM1-203ENST00000479361 FLOT1O75955 427 aa29.38■■■□□ 2.29
PERM1-203ENST00000479361 KCNB2Q92953 911 aa29.38■■■□□ 2.29
PERM1-203ENST00000479361 BCRP11274 1271 aa29.37■■■□□ 2.29
PERM1-203ENST00000479361 MCM5P33992 734 aa29.37■■■□□ 2.29
PERM1-203ENST00000479361 SLC1A4P43007 532 aa29.37■■■□□ 2.29
PERM1-203ENST00000479361 KAT14Q9H8E8 782 aa29.37■■■□□ 2.29
PERM1-203ENST00000479361 MYPNQ86TC9 1320 aa29.37■■■□□ 2.29
PERM1-203ENST00000479361 IFIT3O14879 490 aaKnown RBP29.36■■■□□ 2.29
PERM1-203ENST00000479361 BMP3P12645 472 aa29.36■■■□□ 2.29
PERM1-203ENST00000479361 IFIT1BQ5T764 474 aaKnown RBP29.36■■■□□ 2.29
PERM1-203ENST00000479361 LBX2Q6XYB7 198 aa29.36■■■□□ 2.29
PERM1-203ENST00000479361 RASEFQ8IZ41 740 aa29.36■■■□□ 2.29
PERM1-203ENST00000479361 ANKRD13CQ8N6S4 541 aa29.36■■■□□ 2.29
PERM1-203ENST00000479361 ERO1AQ96HE7 468 aa29.36■■■□□ 2.29
PERM1-203ENST00000479361 NEK1Q96PY6 1258 aa29.36■■■□□ 2.29
PERM1-203ENST00000479361 NUP88Q99567 741 aaPredicted RBP29.36■■■□□ 2.29
PERM1-203ENST00000479361 MTA3Q9BTC8 594 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms