RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 WDR46O15213 610 aaKnown RBP18.33■□□□□ 0.52
C9orf3-217ENST00000479161 TTLL1O95922 423 aa18.33■□□□□ 0.52
C9orf3-217ENST00000479161 TFAP4Q01664 338 aa18.33■□□□□ 0.52
C9orf3-217ENST00000479161 CTDSPL2Q05D32 466 aa18.33■□□□□ 0.52
C9orf3-217ENST00000479161 IMMTQ16891 758 aaKnown RBP18.33■□□□□ 0.52
C9orf3-217ENST00000479161 MFSD6Q6ZSS7 791 aa18.33■□□□□ 0.52
C9orf3-217ENST00000479161 IL25Q9H293 177 aa18.33■□□□□ 0.52
C9orf3-217ENST00000479161 HOXC10Q9NYD6 342 aa18.33■□□□□ 0.52
C9orf3-217ENST00000479161 CPA4Q9UI42 421 aa18.33■□□□□ 0.52
C9orf3-217ENST00000479161 PRDM1O75626 825 aa18.32■□□□□ 0.52
C9orf3-217ENST00000479161 HERVK_113P62684 666 aa18.32■□□□□ 0.52
C9orf3-217ENST00000479161 DGKZQ13574 1117 aa18.32■□□□□ 0.52
C9orf3-217ENST00000479161 FBXO46Q6PJ61 603 aaPredicted RBP18.32■□□□□ 0.52
C9orf3-217ENST00000479161 OTOP1Q7RTM1 612 aa18.32■□□□□ 0.52
C9orf3-217ENST00000479161 MAP4K1Q92918 833 aa18.32■□□□□ 0.52
C9orf3-217ENST00000479161 CEP95Q96GE4 821 aa18.32■□□□□ 0.52
C9orf3-217ENST00000479161 P2RX7Q99572 595 aaKnown RBP18.32■□□□□ 0.52
C9orf3-217ENST00000479161 EFCC1Q9HA90 598 aa18.32■□□□□ 0.52
C9orf3-217ENST00000479161 DOCK3Q8IZD9 2030 aa18.32■□□□□ 0.52
C9orf3-217ENST00000479161 PARP14Q460N5 1801 aa18.31■□□□□ 0.52
C9orf3-217ENST00000479161 TSPY2A6NKD2 308 aa18.31■□□□□ 0.52
C9orf3-217ENST00000479161 HOXD10P28358 340 aa18.31■□□□□ 0.52
C9orf3-217ENST00000479161 COG2Q14746 738 aa18.31■□□□□ 0.52
C9orf3-217ENST00000479161 GMCL1P1Q8NEA9 526 aa18.31■□□□□ 0.52
C9orf3-217ENST00000479161 CD99L2Q8TCZ2 262 aa18.31■□□□□ 0.52
C9orf3-217ENST00000479161 TTC14Q96N46 770 aa18.31■□□□□ 0.52
C9orf3-217ENST00000479161 MCOLN1Q9GZU1 580 aa18.31■□□□□ 0.52
C9orf3-217ENST00000479161 NBPF3Q9H094 633 aa18.31■□□□□ 0.52
C9orf3-217ENST00000479161 RPAP3Q9H6T3 665 aaPredicted RBP18.31■□□□□ 0.52
C9orf3-217ENST00000479161 RABGAP1Q9Y3P9 1069 aa18.31■□□□□ 0.52
C9orf3-217ENST00000479161 TACC3Q9Y6A5 838 aa18.31■□□□□ 0.52
C9orf3-217ENST00000479161 U3KPZ7 1027 aaPredicted RBP18.31■□□□□ 0.52
C9orf3-217ENST00000479161 ZYXQ15942 572 aaKnown RBP18.3■□□□□ 0.52
C9orf3-217ENST00000479161 CCDC178Q5BJE1 867 aa18.3■□□□□ 0.52
C9orf3-217ENST00000479161 MB21D1Q8N884 522 aa18.3■□□□□ 0.52
C9orf3-217ENST00000479161 ESR2Q92731 530 aa18.3■□□□□ 0.52
C9orf3-217ENST00000479161 ESYT1Q9BSJ8 1104 aa18.3■□□□□ 0.52
C9orf3-217ENST00000479161 CNNM2Q9H8M5 875 aa18.3■□□□□ 0.52
C9orf3-217ENST00000479161 TRIM17Q9Y577 477 aa18.3■□□□□ 0.52
C9orf3-217ENST00000479161 F5H6K3 240 aa18.29■□□□□ 0.52
C9orf3-217ENST00000479161 RANBP6O60518 1105 aaKnown RBP18.29■□□□□ 0.52
C9orf3-217ENST00000479161 FCGRTP55899 365 aa18.29■□□□□ 0.52
C9orf3-217ENST00000479161 KLRC3Q07444 240 aa18.29■□□□□ 0.52
C9orf3-217ENST00000479161 FAM47AQ5JRC9 791 aa18.29■□□□□ 0.52
C9orf3-217ENST00000479161 KIAA1755Q5JYT7 1200 aa18.29■□□□□ 0.52
C9orf3-217ENST00000479161 CASC1Q6TDU7 716 aa18.29■□□□□ 0.52
C9orf3-217ENST00000479161 CLEC10AQ8IUN9 316 aa18.29■□□□□ 0.52
C9orf3-217ENST00000479161 STK11IPQ8N1F8 1099 aa18.29■□□□□ 0.52
C9orf3-217ENST00000479161 IL17RBQ9NRM6 502 aa18.29■□□□□ 0.52
C9orf3-217ENST00000479161 RBPJLQ9UBG7 517 aa18.29■□□□□ 0.52
C9orf3-217ENST00000479161 CLIP2Q9UDT6 1046 aa18.29■□□□□ 0.52
C9orf3-217ENST00000479161 ADAMTS5Q9UNA0 930 aa18.29■□□□□ 0.52
C9orf3-217ENST00000479161 PTPN22Q9Y2R2 807 aa18.29■□□□□ 0.52
C9orf3-217ENST00000479161 PSMC4P43686 418 aa18.28■□□□□ 0.52
C9orf3-217ENST00000479161 HAND2P61296 217 aa18.28■□□□□ 0.52
C9orf3-217ENST00000479161 KIAA1211Q6ZU35 1233 aa18.28■□□□□ 0.52
C9orf3-217ENST00000479161 TBC1D10CQ8IV04 446 aa18.28■□□□□ 0.52
C9orf3-217ENST00000479161 ANKRD13CQ8N6S4 541 aa18.28■□□□□ 0.52
C9orf3-217ENST00000479161 GPRC5AQ8NFJ5 357 aa18.28■□□□□ 0.52
C9orf3-217ENST00000479161 KRT23Q9C075 422 aa18.28■□□□□ 0.52
C9orf3-217ENST00000479161 A0A0G2JMZ2 1700 aa18.27■□□□□ 0.52
C9orf3-217ENST00000479161 SPDYE16A6NNV3 312 aaPredicted RBP18.27■□□□□ 0.52
C9orf3-217ENST00000479161 CDC45O75419 566 aa18.27■□□□□ 0.52
C9orf3-217ENST00000479161 CAP1Q01518 475 aa18.27■□□□□ 0.52
C9orf3-217ENST00000479161 PTH1RQ03431 593 aa18.27■□□□□ 0.52
C9orf3-217ENST00000479161 ANKS1AQ92625 1134 aa18.27■□□□□ 0.52
C9orf3-217ENST00000479161 GMCL1Q96IK5 515 aa18.27■□□□□ 0.52
C9orf3-217ENST00000479161 TRIM47Q96LD4 638 aa18.27■□□□□ 0.52
C9orf3-217ENST00000479161 INCENPQ9NQS7 918 aa18.27■□□□□ 0.52
C9orf3-217ENST00000479161 SRRDQ9UH36 339 aa18.27■□□□□ 0.52
C9orf3-217ENST00000479161 HTTP42858 3142 aa18.27■□□□□ 0.51
C9orf3-217ENST00000479161 PLA2G6O60733 806 aa18.26■□□□□ 0.51
C9orf3-217ENST00000479161 NDUFB10O96000 172 aa18.26■□□□□ 0.51
C9orf3-217ENST00000479161 DSG3P32926 999 aa18.26■□□□□ 0.51
C9orf3-217ENST00000479161 ERVK-9P63128 1117 aa18.26■□□□□ 0.51
C9orf3-217ENST00000479161 ERVK-24P63145 666 aa18.26■□□□□ 0.51
C9orf3-217ENST00000479161 CCNA1P78396 465 aa18.26■□□□□ 0.51
C9orf3-217ENST00000479161 ATP2B2Q01814 1243 aa18.26■□□□□ 0.51
C9orf3-217ENST00000479161 RCSD1Q6JBY9 416 aa18.26■□□□□ 0.51
C9orf3-217ENST00000479161 POTEEQ6S8J3 1075 aa18.26■□□□□ 0.51
C9orf3-217ENST00000479161 DGKHQ86XP1 1220 aa18.26■□□□□ 0.51
C9orf3-217ENST00000479161 ABHD8Q96I13 439 aa18.26■□□□□ 0.51
C9orf3-217ENST00000479161 FDX1P10109 184 aa18.25■□□□□ 0.51
C9orf3-217ENST00000479161 TOP1P11387 765 aaKnown RBP18.25■□□□□ 0.51
C9orf3-217ENST00000479161 CTGFP29279 349 aa18.25■□□□□ 0.51
C9orf3-217ENST00000479161 MAPK4P31152 587 aa18.25■□□□□ 0.51
C9orf3-217ENST00000479161 IRF5Q13568 498 aa18.25■□□□□ 0.51
C9orf3-217ENST00000479161 SKAP1Q86WV1 359 aa18.25■□□□□ 0.51
C9orf3-217ENST00000479161 IQCA1Q86XH1 822 aa18.25■□□□□ 0.51
C9orf3-217ENST00000479161 TANGO6Q9C0B7 1094 aa18.25■□□□□ 0.51
C9orf3-217ENST00000479161 LSG1Q9H089 658 aaKnown RBP18.25■□□□□ 0.51
C9orf3-217ENST00000479161 TXNRD2Q9NNW7 524 aa18.25■□□□□ 0.51
C9orf3-217ENST00000479161 TOMM22Q9NS69 142 aa18.25■□□□□ 0.51
C9orf3-217ENST00000479161 EPB41L2O43491 1005 aaKnown RBP18.24■□□□□ 0.51
C9orf3-217ENST00000479161 FLOT1O75955 427 aa18.24■□□□□ 0.51
C9orf3-217ENST00000479161 FMNL1O95466 1100 aaPredicted RBP18.24■□□□□ 0.51
C9orf3-217ENST00000479161 CYP21A2P08686 494 aa18.24■□□□□ 0.51
C9orf3-217ENST00000479161 SPICE1Q8N0Z3 855 aa18.24■□□□□ 0.51
C9orf3-217ENST00000479161 PRPF38AQ8NAV1 312 aaKnown RBP18.24■□□□□ 0.51
C9orf3-217ENST00000479161 COA7Q96BR5 231 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms