RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 ATP2B3Q16720 1220 aa17.62■□□□□ 0.41
USP11-207ENST00000478596 SPTY2D1Q68D10 685 aaPredicted RBP17.62■□□□□ 0.41
USP11-207ENST00000478596 ATG9AQ7Z3C6 839 aa17.62■□□□□ 0.41
USP11-207ENST00000478596 SSH3Q8TE77 659 aa17.62■□□□□ 0.41
USP11-207ENST00000478596 TOX2Q96NM4 488 aa17.62■□□□□ 0.41
USP11-207ENST00000478596 PI4KBQ9UBF8 816 aa17.62■□□□□ 0.41
USP11-207ENST00000478596 CHD7Q9P2D1 2997 aa17.62■□□□□ 0.41
USP11-207ENST00000478596 GRXCR1A8MXD5 290 aa17.61■□□□□ 0.41
USP11-207ENST00000478596 PQBP1O60828 265 aaKnown RBP17.61■□□□□ 0.41
USP11-207ENST00000478596 RFX5P48382 616 aaPredicted RBP17.61■□□□□ 0.41
USP11-207ENST00000478596 KCNQ1P51787 676 aa17.61■□□□□ 0.41
USP11-207ENST00000478596 POLA2Q14181 598 aa17.61■□□□□ 0.41
USP11-207ENST00000478596 HSP90AB4PQ58FF6 505 aa17.61■□□□□ 0.41
USP11-207ENST00000478596 CCDC174Q6PII3 467 aa17.61■□□□□ 0.41
USP11-207ENST00000478596 USP17L2Q6R6M4 530 aa17.61■□□□□ 0.41
USP11-207ENST00000478596 LBX2Q6XYB7 198 aa17.61■□□□□ 0.41
USP11-207ENST00000478596 ANKRD33Q7Z3H0 272 aa17.61■□□□□ 0.41
USP11-207ENST00000478596 SLC44A5Q8NCS7 719 aa17.61■□□□□ 0.41
USP11-207ENST00000478596 ABCF2Q9UG63 623 aa17.61■□□□□ 0.41
USP11-207ENST00000478596 EXOC6BQ9Y2D4 811 aa17.61■□□□□ 0.41
USP11-207ENST00000478596 REV3LO60673 3130 aa17.61■□□□□ 0.41
USP11-207ENST00000478596 USP17L15C9J2P7 530 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 USP17L13C9JLJ4 530 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 USP17L11C9JVI0 530 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 USP17L18D6R9N7 530 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 USP17L22D6RA61 530 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 USP17L17D6RBQ6 530 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 USP17L19D6RCP7 530 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 USP17L20D6RJB6 530 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 ERC2O15083 957 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 TIMP1P01033 207 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 MECOMQ03112 1051 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 FAAP100Q0VG06 881 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 USP17L24Q0WX57 530 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 RAB30Q15771 203 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 FAM47AQ5JRC9 791 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 TMEM240Q5SV17 173 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 C16orf59Q7L2K0 433 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 METTL16Q86W50 562 aaKnown RBP17.6■□□□□ 0.41
USP11-207ENST00000478596 ZNF384Q8TF68 577 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 C12orf42Q96LP6 360 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 PPP4R2Q9NY27 417 aa17.6■□□□□ 0.41
USP11-207ENST00000478596 MRE11P49959 708 aa17.59■□□□□ 0.41
USP11-207ENST00000478596 HDAC1Q13547 482 aaPredicted RBP17.59■□□□□ 0.41
USP11-207ENST00000478596 RASGRF1Q13972 1273 aa17.59■□□□□ 0.41
USP11-207ENST00000478596 CCDC102BQ68D86 513 aa17.59■□□□□ 0.41
USP11-207ENST00000478596 MFSD5Q6N075 450 aa17.59■□□□□ 0.41
USP11-207ENST00000478596 DPP9Q86TI2 863 aa17.59■□□□□ 0.41
USP11-207ENST00000478596 ERC1Q8IUD2 1116 aa17.59■□□□□ 0.41
USP11-207ENST00000478596 SIRT2Q8IXJ6 389 aa17.59■□□□□ 0.41
USP11-207ENST00000478596 HERVK_113Q902F9 699 aa17.59■□□□□ 0.41
USP11-207ENST00000478596 DHX36Q9H2U1 1008 aaKnown RBP17.59■□□□□ 0.41
USP11-207ENST00000478596 BTBD7Q9P203 1132 aa17.59■□□□□ 0.41
USP11-207ENST00000478596 MSRAQ9UJ68 235 aa17.59■□□□□ 0.41
USP11-207ENST00000478596 FBXO3Q9UK99 471 aa17.59■□□□□ 0.41
USP11-207ENST00000478596 STRNO43815 780 aa17.58■□□□□ 0.4
USP11-207ENST00000478596 PPIGQ13427 754 aaKnown RBP eCLIP17.58■□□□□ 0.43e-6■□□□□ 10.4
USP11-207ENST00000478596 CATSPERGQ6ZRH7 1159 aa17.58■□□□□ 0.4
USP11-207ENST00000478596 DNAJC18Q9H819 358 aa17.58■□□□□ 0.4
USP11-207ENST00000478596 COPRSQ9NQ92 184 aa17.58■□□□□ 0.4
USP11-207ENST00000478596 ZBTB21Q9ULJ3 1066 aa17.58■□□□□ 0.4
USP11-207ENST00000478596 GTF3C3Q9Y5Q9 886 aa17.58■□□□□ 0.4
USP11-207ENST00000478596 A0A1W2PQ45 241 aaPredicted RBP17.57■□□□□ 0.4
USP11-207ENST00000478596 A0A1W2PQY0 241 aa17.57■□□□□ 0.4
USP11-207ENST00000478596 DCDC2CA8MYV0 355 aa17.57■□□□□ 0.4
USP11-207ENST00000478596 CIAO1O76071 339 aa17.57■□□□□ 0.4
USP11-207ENST00000478596 ADORA2AP29274 412 aa17.57■□□□□ 0.4
USP11-207ENST00000478596 IL15P40933 162 aaPredicted RBP17.57■□□□□ 0.4
USP11-207ENST00000478596 SHROOM1Q2M3G4 852 aaPredicted RBP17.57■□□□□ 0.4
USP11-207ENST00000478596 B4GALNT3Q6L9W6 998 aa17.57■□□□□ 0.4
USP11-207ENST00000478596 ERICH6Q7L0X2 663 aa17.57■□□□□ 0.4
USP11-207ENST00000478596 SLC28A3Q9HAS3 691 aa17.57■□□□□ 0.4
USP11-207ENST00000478596 XPNPEP3Q9NQH7 507 aa17.57■□□□□ 0.4
USP11-207ENST00000478596 CEP126Q9P2H0 1117 aa17.57■□□□□ 0.4
USP11-207ENST00000478596 TBX21Q9UL17 535 aa17.57■□□□□ 0.4
USP11-207ENST00000478596 TCF20Q9UGU0 1960 aaKnown RBP17.57■□□□□ 0.4
USP11-207ENST00000478596 ZNF236Q9UL36 1845 aa17.56■□□□□ 0.4
USP11-207ENST00000478596 LDHCP07864 332 aa17.56■□□□□ 0.4
USP11-207ENST00000478596 GSTO1P78417 241 aa17.56■□□□□ 0.4
USP11-207ENST00000478596 PSRC1Q6PGN9 363 aaPredicted RBP17.56■□□□□ 0.4
USP11-207ENST00000478596 RNF180Q86T96 592 aa17.56■□□□□ 0.4
USP11-207ENST00000478596 NRBP1Q9UHY1 535 aa17.56■□□□□ 0.4
USP11-207ENST00000478596 GDF11O95390 407 aa17.55■□□□□ 0.4
USP11-207ENST00000478596 RARBP10826 455 aa17.55■□□□□ 0.4
USP11-207ENST00000478596 PRAMEF19Q5SWL8 479 aa17.55■□□□□ 0.4
USP11-207ENST00000478596 FOXP4Q8IVH2 680 aaPredicted RBP17.55■□□□□ 0.4
USP11-207ENST00000478596 TEX11Q8IYF3 940 aa17.55■□□□□ 0.4
USP11-207ENST00000478596 KHSRPQ92945 711 aaKnown RBP eCLIP17.55■□□□□ 0.4
USP11-207ENST00000478596 SLC5A4Q9NY91 659 aa17.55■□□□□ 0.4
USP11-207ENST00000478596 PLXNA1Q9UIW2 1896 aa17.54■□□□□ 0.4
USP11-207ENST00000478596 FAM86C2PA6NEL3 165 aa17.54■□□□□ 0.4
USP11-207ENST00000478596 PI4K2BG5E9Z4 385 aa17.54■□□□□ 0.4
USP11-207ENST00000478596 SMIM22K7EJ46 135 aa17.54■□□□□ 0.4
USP11-207ENST00000478596 TLL1O43897 1013 aa17.54■□□□□ 0.4
USP11-207ENST00000478596 COBLO75128 1261 aa17.54■□□□□ 0.4
USP11-207ENST00000478596 RAB11FIP3O75154 756 aa17.54■□□□□ 0.4
USP11-207ENST00000478596 ADORA1P30542 326 aa17.54■□□□□ 0.4
USP11-207ENST00000478596 NSUN4Q96CB9 384 aaKnown RBP17.54■□□□□ 0.4
USP11-207ENST00000478596 LRRCC1Q9C099 1032 aa17.54■□□□□ 0.4
USP11-207ENST00000478596 NKX2-4Q9H2Z4 354 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms