RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 CWC22Q9HCG8 908 aaKnown RBP6.41□□□□□ -1.38
HPS3-205ENST00000478525 EBF1Q9UH73 591 aa6.41□□□□□ -1.38
HPS3-205ENST00000478525 YBX2Q9Y2T7 364 aaKnown RBP6.41□□□□□ -1.38
HPS3-205ENST00000478525 SHISA3A0PJX4 238 aa6.4□□□□□ -1.38
HPS3-205ENST00000478525 SEMA7AO75326 666 aa6.4□□□□□ -1.38
HPS3-205ENST00000478525 KCNA1Q09470 495 aa6.4□□□□□ -1.38
HPS3-205ENST00000478525 PHC3Q8NDX5 983 aa6.4□□□□□ -1.38
HPS3-205ENST00000478525 BAHD1Q8TBE0 780 aaPredicted RBP6.4□□□□□ -1.38
HPS3-205ENST00000478525 DHX38Q92620 1227 aaKnown RBP6.4□□□□□ -1.38
HPS3-205ENST00000478525 PEX10O60683 326 aa6.39□□□□□ -1.39
HPS3-205ENST00000478525 GALK1P51570 392 aa6.39□□□□□ -1.39
HPS3-205ENST00000478525 YARSP54577 528 aaKnown RBP6.39□□□□□ -1.39
HPS3-205ENST00000478525 TEKQ02763 1124 aa6.39□□□□□ -1.39
HPS3-205ENST00000478525 TMEM201Q5SNT2 666 aa6.39□□□□□ -1.39
HPS3-205ENST00000478525 BNC2Q6ZN30 1099 aaPredicted RBP6.39□□□□□ -1.39
HPS3-205ENST00000478525 GCM1Q9NP62 436 aa6.39□□□□□ -1.39
HPS3-205ENST00000478525 GPR160Q9UJ42 338 aa6.39□□□□□ -1.39
HPS3-205ENST00000478525 RBM47A0AV96 593 aaKnown RBP6.38□□□□□ -1.39
HPS3-205ENST00000478525 PDE6BP35913 854 aa6.38□□□□□ -1.39
HPS3-205ENST00000478525 SLFN12Q8IYM2 578 aa6.38□□□□□ -1.39
HPS3-205ENST00000478525 SHISA4Q96DD7 197 aa6.38□□□□□ -1.39
HPS3-205ENST00000478525 SGPP1Q9BX95 441 aa6.38□□□□□ -1.39
HPS3-205ENST00000478525 ZNF552Q9H707 407 aaPredicted RBP6.38□□□□□ -1.39
HPS3-205ENST00000478525 PARD6AQ9NPB6 346 aa6.38□□□□□ -1.39
HPS3-205ENST00000478525 TEX51A0A1B0GUA7 166 aa6.37□□□□□ -1.39
HPS3-205ENST00000478525 F6X3S4 739 aa6.37□□□□□ -1.39
HPS3-205ENST00000478525 PSPNO60542 156 aa6.37□□□□□ -1.39
HPS3-205ENST00000478525 CILPO75339 1184 aa6.37□□□□□ -1.39
HPS3-205ENST00000478525 EFEMP2O95967 443 aa6.37□□□□□ -1.39
HPS3-205ENST00000478525 RLBP1P12271 317 aa6.37□□□□□ -1.39
HPS3-205ENST00000478525 BMP7P18075 431 aa6.37□□□□□ -1.39
HPS3-205ENST00000478525 TNNI2P48788 182 aa6.37□□□□□ -1.39
HPS3-205ENST00000478525 CHRNEQ04844 493 aa6.37□□□□□ -1.39
HPS3-205ENST00000478525 DUSP4Q13115 394 aa6.37□□□□□ -1.39
HPS3-205ENST00000478525 CCDC84Q86UT8 332 aaPredicted RBP6.37□□□□□ -1.39
HPS3-205ENST00000478525 ANKS4BQ8N8V4 417 aa6.37□□□□□ -1.39
HPS3-205ENST00000478525 SYTL4Q96C24 671 aaPredicted RBP6.37□□□□□ -1.39
HPS3-205ENST00000478525 KREMEN1Q96MU8 473 aa6.37□□□□□ -1.39
HPS3-205ENST00000478525 G6PC3Q9BUM1 346 aa6.37□□□□□ -1.39
HPS3-205ENST00000478525 NOC4LQ9BVI4 516 aaKnown RBP6.37□□□□□ -1.39
HPS3-205ENST00000478525 ASPNQ9BXN1 380 aa6.37□□□□□ -1.39
HPS3-205ENST00000478525 KLHL3Q9UH77 587 aa6.37□□□□□ -1.39
HPS3-205ENST00000478525 CNOT6Q9ULM6 557 aaKnown RBP6.37□□□□□ -1.39
HPS3-205ENST00000478525 A0A0G2JLL6 359 aaPredicted RBP6.36□□□□□ -1.39
HPS3-205ENST00000478525 FAM221AA4D161 298 aa6.36□□□□□ -1.39
HPS3-205ENST00000478525 BPNT1O95861 308 aa6.36□□□□□ -1.39
HPS3-205ENST00000478525 SPPL2CQ8IUH8 684 aa6.36□□□□□ -1.39
HPS3-205ENST00000478525 LINC01599Q8WXQ3 324 aa6.36□□□□□ -1.39
HPS3-205ENST00000478525 ZCCHC4Q9H5U6 513 aa6.36□□□□□ -1.39
HPS3-205ENST00000478525 REV1Q9UBZ9 1251 aa6.36□□□□□ -1.39
HPS3-205ENST00000478525 NOTOA8MTQ0 251 aa6.35□□□□□ -1.39
HPS3-205ENST00000478525 CHURC1-FNTBB4DL54 471 aa6.35□□□□□ -1.39
HPS3-205ENST00000478525 DNAJA2O60884 412 aa6.35□□□□□ -1.39
HPS3-205ENST00000478525 F13A1P00488 732 aa6.35□□□□□ -1.39
HPS3-205ENST00000478525 ST13P50502 369 aaKnown RBP6.35□□□□□ -1.39
HPS3-205ENST00000478525 SSPNQ14714 243 aa6.35□□□□□ -1.39
HPS3-205ENST00000478525 SNX17Q15036 470 aa6.35□□□□□ -1.39
HPS3-205ENST00000478525 TMEM132EQ6IEE7 984 aa6.35□□□□□ -1.39
HPS3-205ENST00000478525 KCNC2Q96PR1 638 aa6.35□□□□□ -1.39
HPS3-205ENST00000478525 ZNF281Q9Y2X9 895 aa6.35□□□□□ -1.39
HPS3-205ENST00000478525 POLR3KQ9Y2Y1 108 aaPredicted RBP6.35□□□□□ -1.39
HPS3-205ENST00000478525 KCTD3Q9Y597 815 aa6.35□□□□□ -1.39
HPS3-205ENST00000478525 PRR36Q9H6K5 1346 aa6.34□□□□□ -1.39
HPS3-205ENST00000478525 GRIN3BO60391 1043 aa6.34□□□□□ -1.39
HPS3-205ENST00000478525 USP2O75604 605 aaPredicted RBP6.34□□□□□ -1.39
HPS3-205ENST00000478525 CTSHP09668 335 aa6.34□□□□□ -1.39
HPS3-205ENST00000478525 LMNB2Q03252 620 aa6.34□□□□□ -1.39
HPS3-205ENST00000478525 CAMK2GQ13555 558 aaPredicted RBP6.34□□□□□ -1.39
HPS3-205ENST00000478525 TAF1CQ15572 869 aaPredicted RBP6.34□□□□□ -1.39
HPS3-205ENST00000478525 EAPPQ56P03 285 aaPredicted RBP6.34□□□□□ -1.39
HPS3-205ENST00000478525 GATAD2BQ8WXI9 593 aa6.34□□□□□ -1.39
HPS3-205ENST00000478525 RELTQ969Z4 430 aa6.34□□□□□ -1.39
HPS3-205ENST00000478525 PARP2Q9UGN5 583 aa6.34□□□□□ -1.39
HPS3-205ENST00000478525 TRIM13O60858 407 aa6.33□□□□□ -1.4
HPS3-205ENST00000478525 HTR3BO95264 441 aa6.33□□□□□ -1.4
HPS3-205ENST00000478525 PF4P02776 101 aa6.33□□□□□ -1.4
HPS3-205ENST00000478525 CLEC16AQ2KHT3 1053 aa6.33□□□□□ -1.4
HPS3-205ENST00000478525 ZNF385BQ569K4 471 aa6.33□□□□□ -1.4
HPS3-205ENST00000478525 ADGRF1Q5T601 910 aa6.33□□□□□ -1.4
HPS3-205ENST00000478525 TCERG1LQ5VWI1 586 aa6.33□□□□□ -1.4
HPS3-205ENST00000478525 DIEXFQ68CQ4 756 aaKnown RBP6.33□□□□□ -1.4
HPS3-205ENST00000478525 NLRX1Q86UT6 975 aa6.33□□□□□ -1.4
HPS3-205ENST00000478525 SIRT2Q8IXJ6 389 aa6.33□□□□□ -1.4
HPS3-205ENST00000478525 RHOVQ96L33 236 aa6.33□□□□□ -1.4
HPS3-205ENST00000478525 CCDC74BQ96LY2 380 aa6.33□□□□□ -1.4
HPS3-205ENST00000478525 ANKRD33BA6NCL7 494 aa6.32□□□□□ -1.4
HPS3-205ENST00000478525 OR14I1A6ND48 311 aa6.32□□□□□ -1.4
HPS3-205ENST00000478525 RFXAPO00287 272 aa6.32□□□□□ -1.4
HPS3-205ENST00000478525 PI3P19957 117 aa6.32□□□□□ -1.4
HPS3-205ENST00000478525 DAB2P98082 770 aa6.32□□□□□ -1.4
HPS3-205ENST00000478525 PSMD2Q13200 908 aa6.32□□□□□ -1.4
HPS3-205ENST00000478525 PHACTR4Q8IZ21 702 aa6.32□□□□□ -1.4
HPS3-205ENST00000478525 VWCEQ96DN2 955 aa6.32□□□□□ -1.4
HPS3-205ENST00000478525 KIF2CQ99661 725 aa6.32□□□□□ -1.4
HPS3-205ENST00000478525 HDAC8Q9BY41 377 aa6.32□□□□□ -1.4
HPS3-205ENST00000478525 MBD1Q9UIS9 605 aaPredicted RBP6.32□□□□□ -1.4
HPS3-205ENST00000478525 USP31Q70CQ4 1352 aa6.31□□□□□ -1.4
HPS3-205ENST00000478525 RPL10P27635 214 aaKnown RBP6.31□□□□□ -1.4
HPS3-205ENST00000478525 NMIQ13287 307 aaPredicted RBP6.31□□□□□ -1.4
HPS3-205ENST00000478525 RNF111Q6ZNA4 994 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms