RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 PCF11O94913 1555 aaKnown RBP6.03□□□□□ -1.44
GPNMB-210ENST00000478451 TLR3O15455 904 aaKnown RBP6.03□□□□□ -1.44
GPNMB-210ENST00000478451 HTR3BO95264 441 aa6.03□□□□□ -1.44
GPNMB-210ENST00000478451 CBX7O95931 251 aa6.03□□□□□ -1.44
GPNMB-210ENST00000478451 EIF4A3P38919 411 aaKnown RBP6.03□□□□□ -1.44
GPNMB-210ENST00000478451 ETV3P41162 512 aa6.03□□□□□ -1.44
GPNMB-210ENST00000478451 YARSP54577 528 aaKnown RBP6.03□□□□□ -1.44
GPNMB-210ENST00000478451 IKZF1Q13422 519 aa6.03□□□□□ -1.44
GPNMB-210ENST00000478451 PKN1Q16512 942 aa6.03□□□□□ -1.44
GPNMB-210ENST00000478451 CWF19L2Q2TBE0 894 aaKnown RBP6.03□□□□□ -1.44
GPNMB-210ENST00000478451 TMEM87AQ8NBN3 555 aa6.03□□□□□ -1.44
GPNMB-210ENST00000478451 DNAJB8Q8NHS0 232 aa6.03□□□□□ -1.44
GPNMB-210ENST00000478451 CYB5D2Q8WUJ1 264 aa6.03□□□□□ -1.44
GPNMB-210ENST00000478451 MRRFQ96E11 262 aaKnown RBP6.03□□□□□ -1.44
GPNMB-210ENST00000478451 LRRC3Q9BY71 257 aa6.03□□□□□ -1.44
GPNMB-210ENST00000478451 REV1Q9UBZ9 1251 aa6.03□□□□□ -1.44
GPNMB-210ENST00000478451 ADAMTS6Q9UKP5 1117 aa6.03□□□□□ -1.44
GPNMB-210ENST00000478451 FGD5Q6ZNL6 1462 aa6.02□□□□□ -1.44
GPNMB-210ENST00000478451 THOC2Q8NI27 1593 aaKnown RBP6.02□□□□□ -1.45
GPNMB-210ENST00000478451 UPK3BL1B0FP48 263 aa6.02□□□□□ -1.45
GPNMB-210ENST00000478451 B8ZZF3 427 aa6.02□□□□□ -1.45
GPNMB-210ENST00000478451 UPK3BL2E5RIL1 263 aa6.02□□□□□ -1.45
GPNMB-210ENST00000478451 H3BS24 57 aa6.02□□□□□ -1.45
GPNMB-210ENST00000478451 KIR3DL1P43629 444 aa6.02□□□□□ -1.45
GPNMB-210ENST00000478451 LDLRAD1Q5T700 205 aa6.02□□□□□ -1.45
GPNMB-210ENST00000478451 CDKAL1Q5VV42 579 aa6.02□□□□□ -1.45
GPNMB-210ENST00000478451 PI4K2BQ8TCG2 481 aa6.02□□□□□ -1.45
GPNMB-210ENST00000478451 HSPA12BQ96MM6 686 aa6.02□□□□□ -1.45
GPNMB-210ENST00000478451 YTHDC1Q96MU7 727 aaKnown RBP6.02□□□□□ -1.45
GPNMB-210ENST00000478451 MBNL3Q9NUK0 354 aaKnown RBP6.02□□□□□ -1.45
GPNMB-210ENST00000478451 KLHL3Q9UH77 587 aa6.02□□□□□ -1.45
GPNMB-210ENST00000478451 AQRO60306 1485 aaKnown RBP eCLIP6.02□□□□□ -1.45
GPNMB-210ENST00000478451 LRRC9Q6ZRR7 1453 aa6.02□□□□□ -1.45
GPNMB-210ENST00000478451 RBAK-RBAKDNI3L0D1 243 aa6.01□□□□□ -1.45
GPNMB-210ENST00000478451 FARP2O94887 1054 aaPredicted RBP6.01□□□□□ -1.45
GPNMB-210ENST00000478451 RNASE1P07998 156 aaKnown RBP6.01□□□□□ -1.45
GPNMB-210ENST00000478451 SLFN12Q8IYM2 578 aa6.01□□□□□ -1.45
GPNMB-210ENST00000478451 PPP1R13LQ8WUF5 828 aa6.01□□□□□ -1.45
GPNMB-210ENST00000478451 ZNF296Q8WUU4 475 aaPredicted RBP6.01□□□□□ -1.45
GPNMB-210ENST00000478451 RC3H2Q9HBD1 1191 aaKnown RBP6.01□□□□□ -1.45
GPNMB-210ENST00000478451 SEMA3GQ9NS98 782 aa6.01□□□□□ -1.45
GPNMB-210ENST00000478451 ADAMTS1Q9UHI8 967 aa6.01□□□□□ -1.45
GPNMB-210ENST00000478451 CEP131Q9UPN4 1083 aa6.01□□□□□ -1.45
GPNMB-210ENST00000478451 ST14Q9Y5Y6 855 aa6.01□□□□□ -1.45
GPNMB-210ENST00000478451 ROBO2Q9HCK4 1378 aa6.01□□□□□ -1.45
GPNMB-210ENST00000478451 SUPT6HQ7KZ85 1726 aaKnown RBP6□□□□□ -1.45
GPNMB-210ENST00000478451 GREM1O60565 184 aa6□□□□□ -1.45
GPNMB-210ENST00000478451 DNAJA2O60884 412 aa6□□□□□ -1.45
GPNMB-210ENST00000478451 CRKP46108 304 aa6□□□□□ -1.45
GPNMB-210ENST00000478451 ZP2Q05996 745 aa6□□□□□ -1.45
GPNMB-210ENST00000478451 TNK2Q07912 1038 aa6□□□□□ -1.45
GPNMB-210ENST00000478451 SLC23A3Q6PIS1 610 aa6□□□□□ -1.45
GPNMB-210ENST00000478451 LRRN4CLQ8ND94 238 aa6□□□□□ -1.45
GPNMB-210ENST00000478451 BACH2Q9BYV9 841 aa6□□□□□ -1.45
GPNMB-210ENST00000478451 ATP13A1Q9HD20 1204 aa6□□□□□ -1.45
GPNMB-210ENST00000478451 PRDM7Q9NQW5 492 aa6□□□□□ -1.45
GPNMB-210ENST00000478451 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6□□□□□ -1.45
GPNMB-210ENST00000478451 CADPSQ9ULU8 1353 aa6□□□□□ -1.45
GPNMB-210ENST00000478451 SETD5Q9C0A6 1442 aa5.99□□□□□ -1.45
GPNMB-210ENST00000478451 ABCA10Q8WWZ4 1543 aa5.99□□□□□ -1.45
GPNMB-210ENST00000478451 LAMC3Q9Y6N6 1575 aa5.99□□□□□ -1.45
GPNMB-210ENST00000478451 CARMIL1Q5VZK9 1371 aa5.99□□□□□ -1.45
GPNMB-210ENST00000478451 CHURC1-FNTBB4DL54 471 aa5.99□□□□□ -1.45
GPNMB-210ENST00000478451 PAPLNO95428 1278 aa5.99□□□□□ -1.45
GPNMB-210ENST00000478451 RECKO95980 971 aa5.99□□□□□ -1.45
GPNMB-210ENST00000478451 ZNF76P36508 570 aa5.99□□□□□ -1.45
GPNMB-210ENST00000478451 THAP5Q7Z6K1 395 aa5.99□□□□□ -1.45
GPNMB-210ENST00000478451 PIWIL2Q8TC59 973 aaKnown RBP5.99□□□□□ -1.45
GPNMB-210ENST00000478451 Q96M66 194 aa5.99□□□□□ -1.45
GPNMB-210ENST00000478451 BRMS1Q9HCU9 246 aa5.99□□□□□ -1.45
GPNMB-210ENST00000478451 UBP1Q9NZI7 540 aa5.99□□□□□ -1.45
GPNMB-210ENST00000478451 E9PSI1 815 aa5.98□□□□□ -1.45
GPNMB-210ENST00000478451 TNNI2P48788 182 aa5.98□□□□□ -1.45
GPNMB-210ENST00000478451 FANCCQ00597 558 aa5.98□□□□□ -1.45
GPNMB-210ENST00000478451 MLECQ14165 292 aa5.98□□□□□ -1.45
GPNMB-210ENST00000478451 PHACTR4Q8IZ21 702 aa5.98□□□□□ -1.45
GPNMB-210ENST00000478451 RNF141Q8WVD5 230 aa5.98□□□□□ -1.45
GPNMB-210ENST00000478451 CARS2Q9HA77 564 aaKnown RBP5.98□□□□□ -1.45
GPNMB-210ENST00000478451 METTL5Q9NRN9 209 aaKnown RBP5.98□□□□□ -1.45
GPNMB-210ENST00000478451 LMCD1Q9NZU5 365 aa5.98□□□□□ -1.45
GPNMB-210ENST00000478451 PCDHB14Q9Y5E9 798 aa5.98□□□□□ -1.45
GPNMB-210ENST00000478451 MAPKBP1O60336 1514 aa5.98□□□□□ -1.45
GPNMB-210ENST00000478451 FMN1Q68DA7 1419 aa5.98□□□□□ -1.45
GPNMB-210ENST00000478451 GCC2Q8IWJ2 1684 aa5.98□□□□□ -1.45
GPNMB-210ENST00000478451 SAMD9Q5K651 1589 aa5.97□□□□□ -1.45
GPNMB-210ENST00000478451 FANCD2Q9BXW9 1451 aa5.97□□□□□ -1.45
GPNMB-210ENST00000478451 RAB3GAP2Q9H2M9 1393 aa5.97□□□□□ -1.45
GPNMB-210ENST00000478451 BIN1O00499 593 aa5.97□□□□□ -1.45
GPNMB-210ENST00000478451 ATE1O95260 518 aa5.97□□□□□ -1.45
GPNMB-210ENST00000478451 APOBRQ0VD83 1088 aa5.97□□□□□ -1.45
GPNMB-210ENST00000478451 SEZ6Q53EL9 994 aa5.97□□□□□ -1.45
GPNMB-210ENST00000478451 ATG4DQ86TL0 474 aaPredicted RBP5.97□□□□□ -1.45
GPNMB-210ENST00000478451 KIAA0825Q8IV33 1275 aa5.97□□□□□ -1.45
GPNMB-210ENST00000478451 DTWD2Q8NBA8 298 aa5.97□□□□□ -1.45
GPNMB-210ENST00000478451 BAHD1Q8TBE0 780 aaPredicted RBP5.97□□□□□ -1.45
GPNMB-210ENST00000478451 UBE2FQ969M7 185 aa5.97□□□□□ -1.45
GPNMB-210ENST00000478451 CCDC74BQ96LY2 380 aa5.97□□□□□ -1.45
GPNMB-210ENST00000478451 SPON2Q9BUD6 331 aa5.97□□□□□ -1.45
GPNMB-210ENST00000478451 ZSWIM5Q9P217 1185 aa5.97□□□□□ -1.45
GPNMB-210ENST00000478451 RAPGEFL1Q9UHV5 662 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms