RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 R3HDMLQ9H3Y0 253 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 VCPKMTQ9H867 229 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 HOXC10Q9NYD6 342 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.41□□□□□ -0.9
DDX39B-218ENST00000478365 MORF4L1Q9UBU8 362 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 RABGAP1Q9Y3P9 1069 aa9.41□□□□□ -0.9
DDX39B-218ENST00000478365 KIAA0100Q14667 2235 aaKnown RBP9.41□□□□□ -0.9
DDX39B-218ENST00000478365 CYP2D7A0A087X1C5 515 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 FMNL1O95466 1100 aaPredicted RBP9.4□□□□□ -0.9
DDX39B-218ENST00000478365 TTLL1O95922 423 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 FGAP02671 866 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 FGRP09769 529 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 CYP2C8P10632 490 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 CAPN2P17655 700 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 PSMC4P43686 418 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 HERVK_113P62684 666 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 JAG1P78504 1218 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 BMP2KLQ5H9B9 411 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 CWC27Q6UX04 472 aaKnown RBP9.4□□□□□ -0.9
DDX39B-218ENST00000478365 CATSPERGQ6ZRH7 1159 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 CCAR1Q8IX12 1150 aaKnown RBP9.4□□□□□ -0.9
DDX39B-218ENST00000478365 GPRC5AQ8NFJ5 357 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 NEDD1Q8NHV4 660 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 COA7Q96BR5 231 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 EMILIN3Q9NT22 766 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 CPA4Q9UI42 421 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 PTPN22Q9Y2R2 807 aa9.4□□□□□ -0.9
DDX39B-218ENST00000478365 MGAMO43451 1857 aa9.4□□□□□ -0.91
DDX39B-218ENST00000478365 LAMA4Q16363 1823 aa9.4□□□□□ -0.91
DDX39B-218ENST00000478365 MYH4Q9Y623 1939 aa9.39□□□□□ -0.91
DDX39B-218ENST00000478365 TSPY2A6NKD2 308 aa9.39□□□□□ -0.91
DDX39B-218ENST00000478365 FDX1P10109 184 aa9.39□□□□□ -0.91
DDX39B-218ENST00000478365 GSPT1P15170 499 aaKnown RBP9.39□□□□□ -0.91
DDX39B-218ENST00000478365 MAPK4P31152 587 aa9.39□□□□□ -0.91
DDX39B-218ENST00000478365 COPB2P35606 906 aa9.39□□□□□ -0.91
DDX39B-218ENST00000478365 COG2Q14746 738 aa9.39□□□□□ -0.91
DDX39B-218ENST00000478365 IMMTQ16891 758 aaKnown RBP9.39□□□□□ -0.91
DDX39B-218ENST00000478365 CCDC129Q6ZRS4 1044 aa9.39□□□□□ -0.91
DDX39B-218ENST00000478365 ZNF589Q86UQ0 364 aaPredicted RBP9.39□□□□□ -0.91
DDX39B-218ENST00000478365 TRMT44Q8IYL2 757 aaKnown RBP9.39□□□□□ -0.91
DDX39B-218ENST00000478365 GMCL1P1Q8NEA9 526 aa9.39□□□□□ -0.91
DDX39B-218ENST00000478365 ACER1Q8TDN7 264 aa9.39□□□□□ -0.91
DDX39B-218ENST00000478365 SOCS4Q8WXH5 440 aa9.39□□□□□ -0.91
DDX39B-218ENST00000478365 RPAP3Q9H6T3 665 aaPredicted RBP9.39□□□□□ -0.91
DDX39B-218ENST00000478365 CNNM2Q9H8M5 875 aa9.39□□□□□ -0.91
DDX39B-218ENST00000478365 SRRDQ9UH36 339 aa9.39□□□□□ -0.91
DDX39B-218ENST00000478365 HPS5Q9UPZ3 1129 aa9.39□□□□□ -0.91
DDX39B-218ENST00000478365 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.39□□□□□ -0.91
DDX39B-218ENST00000478365 IGKV6D-41A0A0C4DH26 115 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 ZNF213O14771 459 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 TNPO2O14787 897 aaKnown RBP9.38□□□□□ -0.91
DDX39B-218ENST00000478365 FOXP2O15409 715 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 EEF2P13639 858 aaKnown RBP9.38□□□□□ -0.91
DDX39B-218ENST00000478365 CHMLP26374 656 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 ATP2B2Q01814 1243 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 IRF5Q13568 498 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 ZYXQ15942 572 aaKnown RBP9.38□□□□□ -0.91
DDX39B-218ENST00000478365 SHROOM1Q2M3G4 852 aaPredicted RBP9.38□□□□□ -0.91
DDX39B-218ENST00000478365 AKNAD1Q5T1N1 836 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 MFSD6Q6ZSS7 791 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 KIAA1211Q6ZU35 1233 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 ANKRD13CQ8N6S4 541 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 RAET1EQ8TD07 263 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 STAG1Q8WVM7 1258 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 ESR2Q92731 530 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 MKL1Q969V6 931 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 TANGO6Q9C0B7 1094 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 CWC22Q9HCG8 908 aaKnown RBP9.38□□□□□ -0.91
DDX39B-218ENST00000478365 TCP11L1Q9NUJ3 509 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 MTMR4Q9NYA4 1195 aa9.38□□□□□ -0.91
DDX39B-218ENST00000478365 A0A1W2PRG0 241 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 SPDYE16A6NNV3 312 aaPredicted RBP9.37□□□□□ -0.91
DDX39B-218ENST00000478365 RANBP6O60518 1105 aaKnown RBP9.37□□□□□ -0.91
DDX39B-218ENST00000478365 FLOT1O75955 427 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 ERVK-9P63128 1117 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 ERVK-24P63145 666 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 TFAP4Q01664 338 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 SLC9C1Q4G0N8 1177 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 VPS53Q5VIR6 699 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 RCSD1Q6JBY9 416 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 IQCA1Q86XH1 822 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 SLAIN1Q8ND83 568 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 SHCBP1Q8NEM2 672 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 PXYLP1Q8TE99 480 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 ARMC5Q96C12 935 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 CEP95Q96GE4 821 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 TRIM47Q96LD4 638 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 TTC14Q96N46 770 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 P2RX7Q99572 595 aaKnown RBP9.37□□□□□ -0.91
DDX39B-218ENST00000478365 KRT23Q9C075 422 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 TOMM22Q9NS69 142 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 PPP4R2Q9NY27 417 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 PNMA2Q9UL42 364 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 IVNS1ABPQ9Y6Y0 642 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 DOCK3Q8IZD9 2030 aa9.37□□□□□ -0.91
DDX39B-218ENST00000478365 CCDC85CA6NKD9 419 aa9.36□□□□□ -0.91
DDX39B-218ENST00000478365 F5H6K3 240 aa9.36□□□□□ -0.91
DDX39B-218ENST00000478365 SGSM2O43147 1006 aa9.36□□□□□ -0.91
DDX39B-218ENST00000478365 PLA2G6O60733 806 aa9.36□□□□□ -0.91
DDX39B-218ENST00000478365 PRDM1O75626 825 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms