RNA–Protein interactions for RNA: ENST00000478251.1

GFM1-206, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-206ENST00000478251 CYTH3O43739 400 aa13.21□□□□□ -0.29
GFM1-206ENST00000478251 ZSCAN22P10073 491 aaPredicted RBP13.21□□□□□ -0.29
GFM1-206ENST00000478251 TOP1P11387 765 aaKnown RBP13.21□□□□□ -0.29
GFM1-206ENST00000478251 EEF2P13639 858 aaKnown RBP13.21□□□□□ -0.29
GFM1-206ENST00000478251 HMGN5P82970 282 aaKnown RBP13.21□□□□□ -0.29
GFM1-206ENST00000478251 GUCY1B3Q02153 619 aa13.21□□□□□ -0.29
GFM1-206ENST00000478251 TNFAIP1Q13829 316 aa13.21□□□□□ -0.29
GFM1-206ENST00000478251 USP17L2Q6R6M4 530 aa13.21□□□□□ -0.29
GFM1-206ENST00000478251 SLC26A6Q9BXS9 759 aa13.21□□□□□ -0.29
GFM1-206ENST00000478251 DHX16O60231 1041 aaKnown RBP13.2□□□□□ -0.3
GFM1-206ENST00000478251 FMNL1O95466 1100 aaPredicted RBP13.2□□□□□ -0.3
GFM1-206ENST00000478251 TTLL1O95922 423 aa13.2□□□□□ -0.3
GFM1-206ENST00000478251 TNNI2P48788 182 aa13.2□□□□□ -0.3
GFM1-206ENST00000478251 PKN1Q16512 942 aa13.2□□□□□ -0.3
GFM1-206ENST00000478251 FOXD4L6Q3SYB3 417 aaPredicted RBP13.2□□□□□ -0.3
GFM1-206ENST00000478251 FAM173BQ6P4H8 233 aa13.2□□□□□ -0.3
GFM1-206ENST00000478251 FOXD4L3Q6VB84 417 aaPredicted RBP13.2□□□□□ -0.3
GFM1-206ENST00000478251 FERMT3Q86UX7 667 aa13.2□□□□□ -0.3
GFM1-206ENST00000478251 TRIM34Q9BYJ4 488 aa13.2□□□□□ -0.3
GFM1-206ENST00000478251 GLIS2Q9BZE0 524 aaPredicted RBP13.2□□□□□ -0.3
GFM1-206ENST00000478251 SMCHD1A6NHR9 2005 aa13.2□□□□□ -0.3
GFM1-206ENST00000478251 PALM3A6NDB9 673 aaPredicted RBP13.2□□□□□ -0.3
GFM1-206ENST00000478251 F13A1P00488 732 aa13.2□□□□□ -0.3
GFM1-206ENST00000478251 PDHBP11177 359 aa13.2□□□□□ -0.3
GFM1-206ENST00000478251 LMOD1P29536 600 aaPredicted RBP13.2□□□□□ -0.3
GFM1-206ENST00000478251 CCDC178Q5BJE1 867 aa13.2□□□□□ -0.3
GFM1-206ENST00000478251 CLEC17AQ6ZS10 378 aa13.2□□□□□ -0.3
GFM1-206ENST00000478251 TMEM179Q6ZVK1 233 aa13.2□□□□□ -0.3
GFM1-206ENST00000478251 TAOK2Q9UL54 1235 aa13.2□□□□□ -0.3
GFM1-206ENST00000478251 ZBTB21Q9ULJ3 1066 aa13.2□□□□□ -0.3
GFM1-206ENST00000478251 WDR33Q9C0J8 1336 aaKnown RBP13.2□□□□□ -0.3
GFM1-206ENST00000478251 STK36Q9NRP7 1315 aa13.2□□□□□ -0.3
GFM1-206ENST00000478251 ZC3H4Q9UPT8 1303 aaKnown RBP13.2□□□□□ -0.3
GFM1-206ENST00000478251 ADM5C9JUS6 153 aa13.19□□□□□ -0.3
GFM1-206ENST00000478251 POTEIP0CG38 1075 aa13.19□□□□□ -0.3
GFM1-206ENST00000478251 POTEJP0CG39 1038 aa13.19□□□□□ -0.3
GFM1-206ENST00000478251 CALM1P0DP23 149 aa13.19□□□□□ -0.3
GFM1-206ENST00000478251 CALM2P0DP24 149 aa13.19□□□□□ -0.3
GFM1-206ENST00000478251 CALM3P0DP25 149 aa13.19□□□□□ -0.3
GFM1-206ENST00000478251 SNHG28P0DPA3 235 aa13.19□□□□□ -0.3
GFM1-206ENST00000478251 CAP2P40123 477 aa13.19□□□□□ -0.3
GFM1-206ENST00000478251 ECE1P42892 770 aa13.19□□□□□ -0.3
GFM1-206ENST00000478251 ICA1Q05084 483 aa13.19□□□□□ -0.3
GFM1-206ENST00000478251 KIAA1755Q5JYT7 1200 aa13.19□□□□□ -0.3
GFM1-206ENST00000478251 APOBEC3FQ8IUX4 373 aaKnown RBP13.19□□□□□ -0.3
GFM1-206ENST00000478251 FAM184AQ8NB25 1140 aa13.19□□□□□ -0.3
GFM1-206ENST00000478251 ACER1Q8TDN7 264 aa13.19□□□□□ -0.3
GFM1-206ENST00000478251 BAG4O95429 457 aaKnown RBP13.18□□□□□ -0.3
GFM1-206ENST00000478251 INPP5BP32019 993 aa13.18□□□□□ -0.3
GFM1-206ENST00000478251 EPHX2P34913 555 aa13.18□□□□□ -0.3
GFM1-206ENST00000478251 ATP2B2Q01814 1243 aa13.18□□□□□ -0.3
GFM1-206ENST00000478251 MAPK8IP2Q13387 824 aaPredicted RBP13.18□□□□□ -0.3
GFM1-206ENST00000478251 DPY19L2Q6NUT2 758 aa13.18□□□□□ -0.3
GFM1-206ENST00000478251 CTCFLQ8NI51 663 aaPredicted RBP13.18□□□□□ -0.3
GFM1-206ENST00000478251 MAP3K14Q99558 947 aa13.18□□□□□ -0.3
GFM1-206ENST00000478251 KANSL2Q9H9L4 492 aa13.18□□□□□ -0.3
GFM1-206ENST00000478251 RBM28Q9NW13 759 aaKnown RBP13.18□□□□□ -0.3
GFM1-206ENST00000478251 NYAP2Q9P242 653 aa13.18□□□□□ -0.3
GFM1-206ENST00000478251 FRMPD2Q68DX3 1309 aaPredicted RBP13.18□□□□□ -0.3
GFM1-206ENST00000478251 CDKL5O76039 1030 aa13.18□□□□□ -0.3
GFM1-206ENST00000478251 FBXO18Q8NFZ0 1043 aa13.18□□□□□ -0.3
GFM1-206ENST00000478251 MKL1Q969V6 931 aa13.18□□□□□ -0.3
GFM1-206ENST00000478251 ALG1Q9BT22 464 aa13.18□□□□□ -0.3
GFM1-206ENST00000478251 TAF1DQ9H5J8 278 aaPredicted RBP13.18□□□□□ -0.3
GFM1-206ENST00000478251 V9GY48 417 aaPredicted RBP13.18□□□□□ -0.3
GFM1-206ENST00000478251 PITPNM2Q9BZ72 1349 aa13.18□□□□□ -0.3
GFM1-206ENST00000478251 CCDC196A0A1B0GTZ2 297 aa13.17□□□□□ -0.3
GFM1-206ENST00000478251 KIF28PB7ZC32 967 aa13.17□□□□□ -0.3
GFM1-206ENST00000478251 ADAMTS3O15072 1205 aa13.17□□□□□ -0.3
GFM1-206ENST00000478251 PDCP20941 246 aa13.17□□□□□ -0.3
GFM1-206ENST00000478251 SSRP1Q08945 709 aaKnown RBP13.17□□□□□ -0.3
GFM1-206ENST00000478251 RESTQ13127 1097 aa13.17□□□□□ -0.3
GFM1-206ENST00000478251 PPP2R5BQ15173 497 aa13.17□□□□□ -0.3
GFM1-206ENST00000478251 PIBF1Q8WXW3 757 aa13.17□□□□□ -0.3
GFM1-206ENST00000478251 RNF26Q9BY78 433 aaPredicted RBP13.17□□□□□ -0.3
GFM1-206ENST00000478251 KLRF2D3W0D1 207 aa13.17□□□□□ -0.3
GFM1-206ENST00000478251 PTPRFP10586 1907 aa13.17□□□□□ -0.3
GFM1-206ENST00000478251 TTBK2Q6IQ55 1244 aa13.17□□□□□ -0.3
GFM1-206ENST00000478251 C8orf76Q96K31 380 aa13.17□□□□□ -0.3
GFM1-206ENST00000478251 NUP88Q99567 741 aaPredicted RBP13.17□□□□□ -0.3
GFM1-206ENST00000478251 UBA5Q9GZZ9 404 aa13.17□□□□□ -0.3
GFM1-206ENST00000478251 PRPF3O43395 683 aaKnown RBP13.16□□□□□ -0.3
GFM1-206ENST00000478251 MCM4P33991 863 aa13.16□□□□□ -0.3
GFM1-206ENST00000478251 NBR1Q14596 966 aa13.16□□□□□ -0.3
GFM1-206ENST00000478251 NPY5RQ15761 445 aa13.16□□□□□ -0.3
GFM1-206ENST00000478251 KRT40Q6A162 431 aa13.16□□□□□ -0.3
GFM1-206ENST00000478251 TYW1BQ6NUM6 668 aa13.16□□□□□ -0.3
GFM1-206ENST00000478251 CPLX2Q6PUV4 134 aaKnown RBP13.16□□□□□ -0.3
GFM1-206ENST00000478251 ZKSCAN4Q969J2 545 aaPredicted RBP13.16□□□□□ -0.3
GFM1-206ENST00000478251 KCNJ14Q9UNX9 436 aa13.16□□□□□ -0.3
GFM1-206ENST00000478251 PARP14Q460N5 1801 aa13.16□□□□□ -0.3
GFM1-206ENST00000478251 DEXIO95424 95 aa13.15□□□□□ -0.3
GFM1-206ENST00000478251 NDUFB10O96000 172 aa13.15□□□□□ -0.3
GFM1-206ENST00000478251 PARP1P09874 1014 aaKnown RBP13.15□□□□□ -0.3
GFM1-206ENST00000478251 KIF5BP33176 963 aa13.15□□□□□ -0.3
GFM1-206ENST00000478251 ZNF543Q08ER8 600 aa13.15□□□□□ -0.3
GFM1-206ENST00000478251 DGKZQ13574 1117 aa13.15□□□□□ -0.3
GFM1-206ENST00000478251 KCTD1Q719H9 257 aa13.15□□□□□ -0.3
GFM1-206ENST00000478251 GDPD2Q9HCC8 539 aa13.15□□□□□ -0.3
GFM1-206ENST00000478251 ZNF112Q9UJU3 913 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms