RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 NEUROD6Q96NK8 337 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 XPNPEP3Q9NQH7 507 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 CXXC1Q9P0U4 656 aaPredicted RBP11.59□□□□□ -0.55
TCTN3-205ENST00000478245 LRP2BPQ9P2M1 347 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 PALD1Q9ULE6 856 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 PA2G4Q9UQ80 394 aaKnown RBP11.59□□□□□ -0.55
TCTN3-205ENST00000478245 AKAP2Q9Y2D5 859 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 PTPRCP08575 1304 aa11.59□□□□□ -0.55
TCTN3-205ENST00000478245 A0A1B0GUL7 405 aa11.58□□□□□ -0.56
TCTN3-205ENST00000478245 A0A1W2PQ45 241 aaPredicted RBP11.58□□□□□ -0.56
TCTN3-205ENST00000478245 A0A1W2PQY0 241 aa11.58□□□□□ -0.56
TCTN3-205ENST00000478245 SPDYE16A6NNV3 312 aaPredicted RBP11.58□□□□□ -0.56
TCTN3-205ENST00000478245 TIMP1P01033 207 aa11.58□□□□□ -0.56
TCTN3-205ENST00000478245 HLA-DOAP06340 250 aa11.58□□□□□ -0.56
TCTN3-205ENST00000478245 UBTFL1P0CB47 393 aaPredicted RBP11.58□□□□□ -0.56
TCTN3-205ENST00000478245 BMP1P13497 986 aa11.58□□□□□ -0.56
TCTN3-205ENST00000478245 VCAM1P19320 739 aa11.58□□□□□ -0.56
TCTN3-205ENST00000478245 FAAP100Q0VG06 881 aa11.58□□□□□ -0.56
TCTN3-205ENST00000478245 PPIGQ13427 754 aaKnown RBP eCLIP11.58□□□□□ -0.564e-6■■□□□ 12.9
TCTN3-205ENST00000478245 RAB3GAP1Q15042 981 aa11.58□□□□□ -0.56
TCTN3-205ENST00000478245 SKIV2LQ15477 1246 aaKnown RBP11.58□□□□□ -0.56
TCTN3-205ENST00000478245 RAB30Q15771 203 aa11.58□□□□□ -0.56
TCTN3-205ENST00000478245 TMEM31Q5JXX7 168 aa11.58□□□□□ -0.56
TCTN3-205ENST00000478245 PI16Q6UXB8 463 aa11.58□□□□□ -0.56
TCTN3-205ENST00000478245 LBX2Q6XYB7 198 aa11.58□□□□□ -0.56
TCTN3-205ENST00000478245 METTL16Q86W50 562 aaKnown RBP11.58□□□□□ -0.56
TCTN3-205ENST00000478245 EPHX3Q9H6B9 360 aa11.58□□□□□ -0.56
TCTN3-205ENST00000478245 AATFQ9NY61 560 aaKnown RBP eCLIP11.58□□□□□ -0.56
TCTN3-205ENST00000478245 HMG20BQ9P0W2 317 aa11.58□□□□□ -0.56
TCTN3-205ENST00000478245 SAP30BPQ9UHR5 308 aaKnown RBP11.58□□□□□ -0.56
TCTN3-205ENST00000478245 MYO5AQ9Y4I1 1855 aaKnown RBP11.57□□□□□ -0.56
TCTN3-205ENST00000478245 COBLO75128 1261 aa11.57□□□□□ -0.56
TCTN3-205ENST00000478245 PGK1P00558 417 aa11.57□□□□□ -0.56
TCTN3-205ENST00000478245 TFF2Q03403 129 aa11.57□□□□□ -0.56
TCTN3-205ENST00000478245 ALYREFQ86V81 257 aaKnown RBP11.57□□□□□ -0.56
TCTN3-205ENST00000478245 MRPL50Q8N5N7 158 aaKnown RBP11.57□□□□□ -0.56
TCTN3-205ENST00000478245 TOX2Q96NM4 488 aa11.57□□□□□ -0.56
TCTN3-205ENST00000478245 MOV10L1Q9BXT6 1211 aaKnown RBP11.57□□□□□ -0.56
TCTN3-205ENST00000478245 KIAA1683Q9H0B3 1180 aa11.57□□□□□ -0.56
TCTN3-205ENST00000478245 RPAP3Q9H6T3 665 aaPredicted RBP11.57□□□□□ -0.56
TCTN3-205ENST00000478245 SLC28A3Q9HAS3 691 aa11.57□□□□□ -0.56
TCTN3-205ENST00000478245 FLT1P17948 1338 aa11.57□□□□□ -0.56
TCTN3-205ENST00000478245 XIRP2A4UGR9 3374 aa11.56□□□□□ -0.56
TCTN3-205ENST00000478245 ZNF316A6NFI3 1004 aaPredicted RBP11.56□□□□□ -0.56
TCTN3-205ENST00000478245 APBB1O00213 710 aa11.56□□□□□ -0.56
TCTN3-205ENST00000478245 ERCC3P19447 782 aa11.56□□□□□ -0.56
TCTN3-205ENST00000478245 KCNQ1P51787 676 aa11.56□□□□□ -0.56
TCTN3-205ENST00000478245 PLS1Q14651 629 aa11.56□□□□□ -0.56
TCTN3-205ENST00000478245 TMEM240Q5SV17 173 aa11.56□□□□□ -0.56
TCTN3-205ENST00000478245 NAA16Q6N069 864 aaPredicted RBP11.56□□□□□ -0.56
TCTN3-205ENST00000478245 MFSD5Q6N075 450 aa11.56□□□□□ -0.56
TCTN3-205ENST00000478245 ANKRD33Q7Z3H0 272 aa11.56□□□□□ -0.56
TCTN3-205ENST00000478245 NUP133Q8WUM0 1156 aa11.56□□□□□ -0.56
TCTN3-205ENST00000478245 NKX2-4Q9H2Z4 354 aa11.56□□□□□ -0.56
TCTN3-205ENST00000478245 STARD7Q9NQZ5 370 aa11.56□□□□□ -0.56
TCTN3-205ENST00000478245 TFCP2Q12800 502 aa11.55□□□□□ -0.56
TCTN3-205ENST00000478245 COG2Q14746 738 aa11.55□□□□□ -0.56
TCTN3-205ENST00000478245 PSRC1Q6PGN9 363 aaPredicted RBP11.55□□□□□ -0.56
TCTN3-205ENST00000478245 ZNF365Q70YC5 407 aa11.55□□□□□ -0.56
TCTN3-205ENST00000478245 NCAPG2Q86XI2 1143 aa11.55□□□□□ -0.56
TCTN3-205ENST00000478245 TMEM199Q8N511 208 aa11.55□□□□□ -0.56
TCTN3-205ENST00000478245 SHCBP1Q8NEM2 672 aa11.55□□□□□ -0.56
TCTN3-205ENST00000478245 ACER1Q8TDN7 264 aa11.55□□□□□ -0.56
TCTN3-205ENST00000478245 MAML3Q96JK9 1138 aa11.55□□□□□ -0.56
TCTN3-205ENST00000478245 TANGO6Q9C0B7 1094 aa11.55□□□□□ -0.56
TCTN3-205ENST00000478245 SPATC1LQ9H0A9 340 aa11.55□□□□□ -0.56
TCTN3-205ENST00000478245 MTIF3Q9H2K0 278 aaKnown RBP11.55□□□□□ -0.56
TCTN3-205ENST00000478245 MROH8Q9H579 483 aa11.55□□□□□ -0.56
TCTN3-205ENST00000478245 CABP5Q9NP86 173 aa11.55□□□□□ -0.56
TCTN3-205ENST00000478245 COPRSQ9NQ92 184 aa11.55□□□□□ -0.56
TCTN3-205ENST00000478245 HOXC10Q9NYD6 342 aa11.55□□□□□ -0.56
TCTN3-205ENST00000478245 HDAC5Q9UQL6 1122 aa11.55□□□□□ -0.56
TCTN3-205ENST00000478245 BRWD1Q9NSI6 2320 aa11.55□□□□□ -0.56
TCTN3-205ENST00000478245 ACRP10323 421 aa11.54□□□□□ -0.56
TCTN3-205ENST00000478245 FCER1AP12319 257 aa11.54□□□□□ -0.56
TCTN3-205ENST00000478245 CSF2RAP15509 400 aa11.54□□□□□ -0.56
TCTN3-205ENST00000478245 ACLYP53396 1101 aa11.54□□□□□ -0.56
TCTN3-205ENST00000478245 PPP4CP60510 307 aa11.54□□□□□ -0.56
TCTN3-205ENST00000478245 ABCB5Q2M3G0 1257 aa11.54□□□□□ -0.56
TCTN3-205ENST00000478245 CERKLQ49MI3 558 aaPredicted RBP11.54□□□□□ -0.56
TCTN3-205ENST00000478245 RASIP1Q5U651 963 aa11.54□□□□□ -0.56
TCTN3-205ENST00000478245 C16orf59Q7L2K0 433 aa11.54□□□□□ -0.56
TCTN3-205ENST00000478245 ABRAQ8N0Z2 381 aa11.54□□□□□ -0.56
TCTN3-205ENST00000478245 VTI1AQ96AJ9 217 aa11.54□□□□□ -0.56
TCTN3-205ENST00000478245 TSEN34Q9BSV6 310 aaKnown RBP11.54□□□□□ -0.56
TCTN3-205ENST00000478245 NRBP1Q9UHY1 535 aa11.54□□□□□ -0.56
TCTN3-205ENST00000478245 MROH7Q68CQ1 1323 aa11.54□□□□□ -0.56
TCTN3-205ENST00000478245 COL11A1P12107 1806 aaPredicted RBP11.53□□□□□ -0.56
TCTN3-205ENST00000478245 ARID4AP29374 1257 aaPredicted RBP11.53□□□□□ -0.56
TCTN3-205ENST00000478245 HERVK_113Q902F9 699 aa11.53□□□□□ -0.56
TCTN3-205ENST00000478245 TBX21Q9UL17 535 aa11.53□□□□□ -0.56
TCTN3-205ENST00000478245 LRRC37A2A6NM11 1700 aa11.52□□□□□ -0.56
TCTN3-205ENST00000478245 FAM86C2PA6NEL3 165 aa11.52□□□□□ -0.57
TCTN3-205ENST00000478245 ERC2O15083 957 aa11.52□□□□□ -0.57
TCTN3-205ENST00000478245 GPR37L1O60883 481 aa11.52□□□□□ -0.57
TCTN3-205ENST00000478245 UQCRFS1P1P0C7P4 283 aa11.52□□□□□ -0.57
TCTN3-205ENST00000478245 AKR1A1P14550 325 aa11.52□□□□□ -0.57
TCTN3-205ENST00000478245 MCAMP43121 646 aa11.52□□□□□ -0.57
TCTN3-205ENST00000478245 PPP2R2DQ66LE6 453 aa11.52□□□□□ -0.57
TCTN3-205ENST00000478245 TATDN1Q6P1N9 297 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms