RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 TOX2Q96NM4 488 aa8.22□□□□□ -1.09
SYCP3-205ENST00000478238 ASPNQ9BXN1 380 aa8.22□□□□□ -1.09
SYCP3-205ENST00000478238 EPB41L4BQ9H329 900 aa8.22□□□□□ -1.09
SYCP3-205ENST00000478238 KCNK12Q9HB15 430 aa8.22□□□□□ -1.09
SYCP3-205ENST00000478238 DCP1AQ9NPI6 582 aaPredicted RBP8.22□□□□□ -1.09
SYCP3-205ENST00000478238 PCDHA11Q9Y5I1 949 aa8.22□□□□□ -1.09
SYCP3-205ENST00000478238 ZBTB7CA1YPR0 619 aa8.21□□□□□ -1.1
SYCP3-205ENST00000478238 DNAJA2O60884 412 aa8.21□□□□□ -1.1
SYCP3-205ENST00000478238 ZGLP1P0C6A0 271 aa8.21□□□□□ -1.1
SYCP3-205ENST00000478238 C1QTNF9P0C862 333 aa8.21□□□□□ -1.1
SYCP3-205ENST00000478238 CFPP27918 469 aa8.21□□□□□ -1.1
SYCP3-205ENST00000478238 TRHRP34981 398 aaPredicted RBP8.21□□□□□ -1.1
SYCP3-205ENST00000478238 ITGAEP38570 1179 aa8.21□□□□□ -1.1
SYCP3-205ENST00000478238 KRTAP19-4Q3LI73 84 aa8.21□□□□□ -1.1
SYCP3-205ENST00000478238 PDZD8Q8NEN9 1154 aa8.21□□□□□ -1.1
SYCP3-205ENST00000478238 SP110Q9HB58 689 aa8.21□□□□□ -1.1
SYCP3-205ENST00000478238 NFIBO00712 420 aa8.2□□□□□ -1.1
SYCP3-205ENST00000478238 ERCC3P19447 782 aa8.2□□□□□ -1.1
SYCP3-205ENST00000478238 TMCO4Q5TGY1 634 aa8.2□□□□□ -1.1
SYCP3-205ENST00000478238 FAM196AQ6ZSG2 479 aa8.2□□□□□ -1.1
SYCP3-205ENST00000478238 ANKLE2Q86XL3 938 aa8.2□□□□□ -1.1
SYCP3-205ENST00000478238 C1QL4Q86Z23 238 aa8.2□□□□□ -1.1
SYCP3-205ENST00000478238 PHACTR4Q8IZ21 702 aa8.2□□□□□ -1.1
SYCP3-205ENST00000478238 KIF2CQ99661 725 aa8.2□□□□□ -1.1
SYCP3-205ENST00000478238 RNF32Q9H0A6 362 aa8.2□□□□□ -1.1
SYCP3-205ENST00000478238 KBTBD4Q9NVX7 518 aa8.2□□□□□ -1.1
SYCP3-205ENST00000478238 RBM47A0AV96 593 aaKnown RBP8.19□□□□□ -1.1
SYCP3-205ENST00000478238 SHISA3A0PJX4 238 aa8.19□□□□□ -1.1
SYCP3-205ENST00000478238 LRRC56Q8IYG6 542 aaPredicted RBP8.19□□□□□ -1.1
SYCP3-205ENST00000478238 KRTAP4-7Q9BYR0 210 aa8.19□□□□□ -1.1
SYCP3-205ENST00000478238 C19orf44Q9H6X5 657 aa8.19□□□□□ -1.1
SYCP3-205ENST00000478238 TLR3O15455 904 aaKnown RBP8.18□□□□□ -1.1
SYCP3-205ENST00000478238 MFAP1P55081 439 aaKnown RBP8.18□□□□□ -1.1
SYCP3-205ENST00000478238 LCE4AQ5TA78 99 aa8.18□□□□□ -1.1
SYCP3-205ENST00000478238 ERMP1Q7Z2K6 904 aa8.18□□□□□ -1.1
SYCP3-205ENST00000478238 LILRA2Q8N149 483 aa8.18□□□□□ -1.1
SYCP3-205ENST00000478238 OXR1Q8N573 874 aa8.18□□□□□ -1.1
SYCP3-205ENST00000478238 ZSCAN18Q8TBC5 510 aaPredicted RBP8.18□□□□□ -1.1
SYCP3-205ENST00000478238 DHX38Q92620 1227 aaKnown RBP8.18□□□□□ -1.1
SYCP3-205ENST00000478238 COPRSQ9NQ92 184 aa8.18□□□□□ -1.1
SYCP3-205ENST00000478238 FITM1A5D6W6 292 aa8.17□□□□□ -1.1
SYCP3-205ENST00000478238 TMEM253P0C7T8 217 aa8.17□□□□□ -1.1
SYCP3-205ENST00000478238 GBP1P32455 592 aa8.17□□□□□ -1.1
SYCP3-205ENST00000478238 FBXL19Q6PCT2 694 aa8.17□□□□□ -1.1
SYCP3-205ENST00000478238 VWCEQ96DN2 955 aa8.17□□□□□ -1.1
SYCP3-205ENST00000478238 KCNQ5Q9NR82 932 aa8.17□□□□□ -1.1
SYCP3-205ENST00000478238 RGS13O14921 159 aa8.16□□□□□ -1.1
SYCP3-205ENST00000478238 TEKQ02763 1124 aa8.16□□□□□ -1.1
SYCP3-205ENST00000478238 CLEC16AQ2KHT3 1053 aa8.16□□□□□ -1.1
SYCP3-205ENST00000478238 CWF19L2Q2TBE0 894 aaKnown RBP8.16□□□□□ -1.1
SYCP3-205ENST00000478238 TIGD5Q53EQ6 642 aa8.16□□□□□ -1.1
SYCP3-205ENST00000478238 SYTL4Q96C24 671 aaPredicted RBP8.16□□□□□ -1.1
SYCP3-205ENST00000478238 LRRC3Q9BY71 257 aa8.16□□□□□ -1.1
SYCP3-205ENST00000478238 ROBO2Q9HCK4 1378 aa8.15□□□□□ -1.1
SYCP3-205ENST00000478238 SLC22A31A6NKX4 558 aa8.15□□□□□ -1.1
SYCP3-205ENST00000478238 NPIPB6E9PJ23 425 aa8.15□□□□□ -1.1
SYCP3-205ENST00000478238 MED14OSP0DP75 135 aa8.15□□□□□ -1.1
SYCP3-205ENST00000478238 CHMP4BP1P59074 171 aa8.15□□□□□ -1.1
SYCP3-205ENST00000478238 MLECQ14165 292 aa8.15□□□□□ -1.1
SYCP3-205ENST00000478238 NR0B2Q15466 257 aa8.15□□□□□ -1.1
SYCP3-205ENST00000478238 ARSHQ5FYA8 562 aa8.15□□□□□ -1.1
SYCP3-205ENST00000478238 LCNL1Q6ZST4 164 aa8.15□□□□□ -1.1
SYCP3-205ENST00000478238 SLC26A8Q96RN1 970 aa8.15□□□□□ -1.1
SYCP3-205ENST00000478238 BRMS1Q9HCU9 246 aa8.15□□□□□ -1.1
SYCP3-205ENST00000478238 GREM1O60565 184 aa8.14□□□□□ -1.11
SYCP3-205ENST00000478238 UBOX5O94941 541 aa8.14□□□□□ -1.11
SYCP3-205ENST00000478238 EIF4A3P38919 411 aaKnown RBP8.14□□□□□ -1.11
SYCP3-205ENST00000478238 ATG14Q6ZNE5 492 aa8.14□□□□□ -1.11
SYCP3-205ENST00000478238 GIPC2Q8TF65 315 aa8.14□□□□□ -1.11
SYCP3-205ENST00000478238 BCL2L13Q9BXK5 485 aa8.14□□□□□ -1.11
SYCP3-205ENST00000478238 SLC6A17Q9H1V8 727 aa8.14□□□□□ -1.11
SYCP3-205ENST00000478238 CD320Q9NPF0 282 aa8.14□□□□□ -1.11
SYCP3-205ENST00000478238 EBF1Q9UH73 591 aa8.14□□□□□ -1.11
SYCP3-205ENST00000478238 SUPT16HQ9Y5B9 1047 aaKnown RBP8.14□□□□□ -1.11
SYCP3-205ENST00000478238 PCDHB14Q9Y5E9 798 aa8.14□□□□□ -1.11
SYCP3-205ENST00000478238 ETV2O00321 342 aaPredicted RBP8.13□□□□□ -1.11
SYCP3-205ENST00000478238 RAG1P15918 1043 aa8.13□□□□□ -1.11
SYCP3-205ENST00000478238 GLDCP23378 1020 aa8.13□□□□□ -1.11
SYCP3-205ENST00000478238 RNF4P78317 190 aa8.13□□□□□ -1.11
SYCP3-205ENST00000478238 CHRNEQ04844 493 aa8.13□□□□□ -1.11
SYCP3-205ENST00000478238 DUSP4Q13115 394 aa8.13□□□□□ -1.11
SYCP3-205ENST00000478238 NMIQ13287 307 aaPredicted RBP8.13□□□□□ -1.11
SYCP3-205ENST00000478238 IRF2BP1Q8IU81 584 aa8.13□□□□□ -1.11
SYCP3-205ENST00000478238 SPPL2CQ8IUH8 684 aa8.13□□□□□ -1.11
SYCP3-205ENST00000478238 ASCC2Q9H1I8 757 aaPredicted RBP8.13□□□□□ -1.11
SYCP3-205ENST00000478238 CWC22Q9HCG8 908 aaKnown RBP8.13□□□□□ -1.11
SYCP3-205ENST00000478238 GMIPQ9P107 970 aa8.13□□□□□ -1.11
SYCP3-205ENST00000478238 ZNF281Q9Y2X9 895 aa8.13□□□□□ -1.11
SYCP3-205ENST00000478238 TCAF2A6NFQ2 919 aa8.12□□□□□ -1.11
SYCP3-205ENST00000478238 ATE1O95260 518 aa8.12□□□□□ -1.11
SYCP3-205ENST00000478238 ZSCAN22P10073 491 aaPredicted RBP8.12□□□□□ -1.11
SYCP3-205ENST00000478238 KCNA10Q16322 511 aa8.12□□□□□ -1.11
SYCP3-205ENST00000478238 SIAH1Q8IUQ4 282 aa8.12□□□□□ -1.11
SYCP3-205ENST00000478238 ANKS4BQ8N8V4 417 aa8.12□□□□□ -1.11
SYCP3-205ENST00000478238 ENOX1Q8TC92 643 aaKnown RBP8.12□□□□□ -1.11
SYCP3-205ENST00000478238 SYTL5Q8TDW5 730 aaPredicted RBP8.12□□□□□ -1.11
SYCP3-205ENST00000478238 KCNN1Q92952 543 aa8.12□□□□□ -1.11
SYCP3-205ENST00000478238 HDAC8Q9BY41 377 aa8.12□□□□□ -1.11
SYCP3-205ENST00000478238 YBX2Q9Y2T7 364 aaKnown RBP8.12□□□□□ -1.11
SYCP3-205ENST00000478238 CRKP46108 304 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms