RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 SPACA3Q8IXA5 215 aa7.53□□□□□ -1.2
VPS50-214ENST00000477935 CYB5D2Q8WUJ1 264 aa7.53□□□□□ -1.2
VPS50-214ENST00000477935 BCL7CQ8WUZ0 217 aaPredicted RBP7.53□□□□□ -1.2
VPS50-214ENST00000477935 MISP3Q96FF7 219 aa7.53□□□□□ -1.2
VPS50-214ENST00000477935 TNKS2Q9H2K2 1166 aa7.53□□□□□ -1.2
VPS50-214ENST00000477935 EHMT1Q9H9B1 1298 aa7.53□□□□□ -1.2
VPS50-214ENST00000477935 PRR33A8MZF0 331 aa7.52□□□□□ -1.21
VPS50-214ENST00000477935 ZNF865P0CJ78 1059 aaPredicted RBP7.52□□□□□ -1.21
VPS50-214ENST00000477935 MCM4P33991 863 aa7.52□□□□□ -1.21
VPS50-214ENST00000477935 MLECQ14165 292 aa7.52□□□□□ -1.21
VPS50-214ENST00000477935 NKPD1Q17RQ9 610 aa7.52□□□□□ -1.21
VPS50-214ENST00000477935 GK5Q6ZS86 529 aa7.52□□□□□ -1.21
VPS50-214ENST00000477935 C22orf34Q6ZV56 151 aa7.52□□□□□ -1.21
VPS50-214ENST00000477935 NT5DC4Q86YG4 428 aa7.52□□□□□ -1.21
VPS50-214ENST00000477935 ZNF654Q8IZM8 581 aa7.52□□□□□ -1.21
VPS50-214ENST00000477935 STK11IPQ8N1F8 1099 aa7.52□□□□□ -1.21
VPS50-214ENST00000477935 REXO1Q8N1G1 1221 aaKnown RBP7.52□□□□□ -1.21
VPS50-214ENST00000477935 DNAJB8Q8NHS0 232 aa7.52□□□□□ -1.21
VPS50-214ENST00000477935 PPP1R13LQ8WUF5 828 aa7.52□□□□□ -1.21
VPS50-214ENST00000477935 SLC5A6Q9Y289 635 aa7.52□□□□□ -1.21
VPS50-214ENST00000477935 ADAMTSL3P82987 1691 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 TMEM265A0A087WTH1 108 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 SLC22A31A6NKX4 558 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 RBAK-RBAKDNI3L0D1 243 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 CYP7A1P22680 504 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 ETV3P41162 512 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 ZNF165P49910 485 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 PRKCQQ04759 706 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 CLCQ05315 142 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 WFDC3Q8IUB2 231 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 MFSD4AQ8N468 514 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 FLCNQ8NFG4 579 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 COX4I2Q96KJ9 171 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 HRASLS5Q96KN8 279 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 FBXL18Q96ME1 805 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 GMIPQ9P107 970 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 VAV3Q9UKW4 847 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 CEP131Q9UPN4 1083 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 SNX11Q9Y5W9 270 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 OAS3Q9Y6K5 1087 aaKnown RBP7.51□□□□□ -1.21
VPS50-214ENST00000477935 ARAP3Q8WWN8 1544 aa7.51□□□□□ -1.21
VPS50-214ENST00000477935 RBM25P49756 843 aaKnown RBP7.5□□□□□ -1.21
VPS50-214ENST00000477935 BNIP3Q12983 259 aa7.5□□□□□ -1.21
VPS50-214ENST00000477935 ZNF574Q6ZN55 896 aaPredicted RBP7.5□□□□□ -1.21
VPS50-214ENST00000477935 SPRED2Q7Z698 418 aa7.5□□□□□ -1.21
VPS50-214ENST00000477935 YEATS2Q9ULM3 1422 aa7.5□□□□□ -1.21
VPS50-214ENST00000477935 WDR7Q9Y4E6 1490 aa7.49□□□□□ -1.21
VPS50-214ENST00000477935 CBX7O95931 251 aa7.49□□□□□ -1.21
VPS50-214ENST00000477935 CD96P40200 585 aa7.49□□□□□ -1.21
VPS50-214ENST00000477935 KIR3DL1P43629 444 aa7.49□□□□□ -1.21
VPS50-214ENST00000477935 CLCN7P51798 805 aa7.49□□□□□ -1.21
VPS50-214ENST00000477935 PAK2Q13177 524 aa7.49□□□□□ -1.21
VPS50-214ENST00000477935 AOC3Q16853 763 aa7.49□□□□□ -1.21
VPS50-214ENST00000477935 ARSHQ5FYA8 562 aa7.49□□□□□ -1.21
VPS50-214ENST00000477935 OVOS1Q6IE37 1185 aa7.49□□□□□ -1.21
VPS50-214ENST00000477935 TP53INP2Q8IXH6 220 aa7.49□□□□□ -1.21
VPS50-214ENST00000477935 PHACTR4Q8IZ21 702 aa7.49□□□□□ -1.21
VPS50-214ENST00000477935 CCDC74BQ96LY2 380 aa7.49□□□□□ -1.21
VPS50-214ENST00000477935 PAK6Q9NQU5 681 aaPredicted RBP7.49□□□□□ -1.21
VPS50-214ENST00000477935 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.49□□□□□ -1.21
VPS50-214ENST00000477935 CAPN6Q9Y6Q1 641 aa7.49□□□□□ -1.21
VPS50-214ENST00000477935 FAM155AB1AL88 458 aaPredicted RBP7.48□□□□□ -1.21
VPS50-214ENST00000477935 CD8BP10966 210 aa7.48□□□□□ -1.21
VPS50-214ENST00000477935 BAHD1Q8TBE0 780 aaPredicted RBP7.48□□□□□ -1.21
VPS50-214ENST00000477935 KIF2CQ99661 725 aa7.48□□□□□ -1.21
VPS50-214ENST00000477935 KIF21BO75037 1637 aa7.48□□□□□ -1.21
VPS50-214ENST00000477935 RAG1P15918 1043 aa7.47□□□□□ -1.21
VPS50-214ENST00000477935 GBP1P32455 592 aa7.47□□□□□ -1.21
VPS50-214ENST00000477935 TNNI2P48788 182 aa7.47□□□□□ -1.21
VPS50-214ENST00000477935 TNK2Q07912 1038 aa7.47□□□□□ -1.21
VPS50-214ENST00000477935 RAD51AP2Q09MP3 1159 aa7.47□□□□□ -1.21
VPS50-214ENST00000477935 CDKAL1Q5VV42 579 aa7.47□□□□□ -1.21
VPS50-214ENST00000477935 CDCP2Q5VXM1 449 aa7.47□□□□□ -1.21
VPS50-214ENST00000477935 ABI1Q8IZP0 508 aa7.47□□□□□ -1.21
VPS50-214ENST00000477935 AGBL5Q8NDL9 886 aa7.47□□□□□ -1.21
VPS50-214ENST00000477935 ASB11Q8WXH4 323 aa7.47□□□□□ -1.21
VPS50-214ENST00000477935 ANTXR1Q9H6X2 564 aa7.47□□□□□ -1.21
VPS50-214ENST00000477935 ST14Q9Y5Y6 855 aa7.47□□□□□ -1.21
VPS50-214ENST00000477935 IQSEC2Q5JU85 1478 aa7.47□□□□□ -1.21
VPS50-214ENST00000477935 PITPNM2Q9BZ72 1349 aa7.47□□□□□ -1.21
VPS50-214ENST00000477935 POGZQ7Z3K3 1410 aa7.46□□□□□ -1.21
VPS50-214ENST00000477935 MEIS3P2A8K0S8 358 aa7.46□□□□□ -1.22
VPS50-214ENST00000477935 RGS13O14921 159 aa7.46□□□□□ -1.22
VPS50-214ENST00000477935 RAPGEF3O95398 923 aa7.46□□□□□ -1.22
VPS50-214ENST00000477935 NLRC3Q7RTR2 1065 aa7.46□□□□□ -1.22
VPS50-214ENST00000477935 RNF141Q8WVD5 230 aa7.46□□□□□ -1.22
VPS50-214ENST00000477935 TMEM40Q8WWA1 233 aa7.46□□□□□ -1.22
VPS50-214ENST00000477935 ATG4CQ96DT6 458 aa7.46□□□□□ -1.22
VPS50-214ENST00000477935 Q96M66 194 aa7.46□□□□□ -1.22
VPS50-214ENST00000477935 HSPA12BQ96MM6 686 aa7.46□□□□□ -1.22
VPS50-214ENST00000477935 TGIF2Q9GZN2 237 aa7.46□□□□□ -1.22
VPS50-214ENST00000477935 CNNM2Q9H8M5 875 aa7.46□□□□□ -1.22
VPS50-214ENST00000477935 ZNRF3Q9ULT6 936 aa7.46□□□□□ -1.22
VPS50-214ENST00000477935 CUL7Q14999 1698 aa7.46□□□□□ -1.22
VPS50-214ENST00000477935 UBOX5O94941 541 aa7.45□□□□□ -1.22
VPS50-214ENST00000477935 TCF3P15923 654 aa7.45□□□□□ -1.22
VPS50-214ENST00000477935 POLR2BP30876 1174 aaKnown RBP7.45□□□□□ -1.22
VPS50-214ENST00000477935 LRRFIP1Q32MZ4 808 aaKnown RBP7.45□□□□□ -1.22
VPS50-214ENST00000477935 PIWIL2Q8TC59 973 aaKnown RBP7.45□□□□□ -1.22
VPS50-214ENST00000477935 GPRASP2Q96D09 838 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms