RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 ERVK-9P63128 1117 aa16.5■□□□□ 0.23
SOX2-OT-208ENST00000477928 ERVK-24P63145 666 aa16.5■□□□□ 0.23
SOX2-OT-208ENST00000477928 ATP2B2Q01814 1243 aa16.5■□□□□ 0.23
SOX2-OT-208ENST00000477928 SLAIN1Q8ND83 568 aa16.5■□□□□ 0.23
SOX2-OT-208ENST00000477928 GPRC5AQ8NFJ5 357 aa16.5■□□□□ 0.23
SOX2-OT-208ENST00000477928 COA7Q96BR5 231 aa16.5■□□□□ 0.23
SOX2-OT-208ENST00000477928 HELLSQ9NRZ9 838 aa16.5■□□□□ 0.23
SOX2-OT-208ENST00000477928 APPP05067 770 aa16.49■□□□□ 0.23
SOX2-OT-208ENST00000477928 EEF2P13639 858 aaKnown RBP16.49■□□□□ 0.23
SOX2-OT-208ENST00000477928 TDO2P48775 406 aa16.49■□□□□ 0.23
SOX2-OT-208ENST00000477928 IRF5Q13568 498 aa16.49■□□□□ 0.23
SOX2-OT-208ENST00000477928 VPS53Q5VIR6 699 aa16.49■□□□□ 0.23
SOX2-OT-208ENST00000477928 SAMD1Q6SPF0 538 aaPredicted RBP16.49■□□□□ 0.23
SOX2-OT-208ENST00000477928 PLEKHM2Q8IWE5 1019 aa16.49■□□□□ 0.23
SOX2-OT-208ENST00000477928 FAM227BQ96M60 508 aa16.49■□□□□ 0.23
SOX2-OT-208ENST00000477928 RNF208Q9H0X6 261 aa16.49■□□□□ 0.23
SOX2-OT-208ENST00000477928 TACC3Q9Y6A5 838 aa16.49■□□□□ 0.23
SOX2-OT-208ENST00000477928 ROBO3Q96MS0 1386 aa16.49■□□□□ 0.23
SOX2-OT-208ENST00000477928 CYP2B6P20813 491 aa16.48■□□□□ 0.23
SOX2-OT-208ENST00000477928 IFNL3Q8IZI9 196 aa16.48■□□□□ 0.23
SOX2-OT-208ENST00000477928 TRIB2Q92519 343 aa16.48■□□□□ 0.23
SOX2-OT-208ENST00000477928 TANGO6Q9C0B7 1094 aa16.48■□□□□ 0.23
SOX2-OT-208ENST00000477928 SH2D4AQ9H788 454 aa16.48■□□□□ 0.23
SOX2-OT-208ENST00000477928 INCENPQ9NQS7 918 aa16.48■□□□□ 0.23
SOX2-OT-208ENST00000477928 TMX2Q9Y320 296 aa16.48■□□□□ 0.23
SOX2-OT-208ENST00000477928 A0A0D9SFI3 127 aa16.47■□□□□ 0.23
SOX2-OT-208ENST00000477928 HIP1O00291 1037 aa16.47■□□□□ 0.23
SOX2-OT-208ENST00000477928 MFAP1P55081 439 aaKnown RBP16.47■□□□□ 0.23
SOX2-OT-208ENST00000477928 CCL14Q16627 93 aa16.47■□□□□ 0.23
SOX2-OT-208ENST00000477928 GPR142Q7Z601 462 aa16.47■□□□□ 0.23
SOX2-OT-208ENST00000477928 NUP88Q99567 741 aaPredicted RBP16.47■□□□□ 0.23
SOX2-OT-208ENST00000477928 VCPKMTQ9H867 229 aa16.47■□□□□ 0.23
SOX2-OT-208ENST00000477928 FBXO28Q9NVF7 368 aa16.47■□□□□ 0.23
SOX2-OT-208ENST00000477928 RABGAP1Q9Y3P9 1069 aa16.47■□□□□ 0.23
SOX2-OT-208ENST00000477928 SLC3A2P08195 630 aaKnown RBP16.46■□□□□ 0.23
SOX2-OT-208ENST00000477928 MCMDC2Q4G0Z9 681 aa16.46■□□□□ 0.23
SOX2-OT-208ENST00000477928 WDR78Q5VTH9 848 aa16.46■□□□□ 0.23
SOX2-OT-208ENST00000477928 PXYLP1Q8TE99 480 aa16.46■□□□□ 0.23
SOX2-OT-208ENST00000477928 U2AF1L4Q8WU68 220 aaKnown RBP16.46■□□□□ 0.23
SOX2-OT-208ENST00000477928 USP6NLQ92738 828 aa16.46■□□□□ 0.23
SOX2-OT-208ENST00000477928 ATG4CQ96DT6 458 aa16.46■□□□□ 0.23
SOX2-OT-208ENST00000477928 ARHGEF10LQ9HCE6 1279 aa16.46■□□□□ 0.23
SOX2-OT-208ENST00000477928 RBBP6Q7Z6E9 1792 aaKnown RBP16.46■□□□□ 0.22
SOX2-OT-208ENST00000477928 MGAMO43451 1857 aa16.46■□□□□ 0.22
SOX2-OT-208ENST00000477928 PDE4DIPQ5VU43 2346 aa16.45■□□□□ 0.22
SOX2-OT-208ENST00000477928 TRIM6-TRIM34B2RNG4 842 aa16.45■□□□□ 0.22
SOX2-OT-208ENST00000477928 RAD21O60216 631 aa16.45■□□□□ 0.22
SOX2-OT-208ENST00000477928 GJB1P08034 283 aa16.45■□□□□ 0.22
SOX2-OT-208ENST00000477928 GJA8P48165 433 aa16.45■□□□□ 0.22
SOX2-OT-208ENST00000477928 UBXN2AP68543 259 aa16.45■□□□□ 0.22
SOX2-OT-208ENST00000477928 MORN1Q5T089 497 aa16.45■□□□□ 0.22
SOX2-OT-208ENST00000477928 LBX2Q6XYB7 198 aa16.45■□□□□ 0.22
SOX2-OT-208ENST00000477928 ZNF589Q86UQ0 364 aaPredicted RBP16.45■□□□□ 0.22
SOX2-OT-208ENST00000477928 LPAR1Q92633 364 aa16.45■□□□□ 0.22
SOX2-OT-208ENST00000477928 DEFB118Q96PH6 123 aa16.45■□□□□ 0.22
SOX2-OT-208ENST00000477928 KANSL2Q9H9L4 492 aa16.45■□□□□ 0.22
SOX2-OT-208ENST00000477928 ZMYM6O95789 1325 aa16.45■□□□□ 0.22
SOX2-OT-208ENST00000477928 IGKV6D-41A0A0C4DH26 115 aa16.44■□□□□ 0.22
SOX2-OT-208ENST00000477928 HMGCRP04035 888 aa16.44■□□□□ 0.22
SOX2-OT-208ENST00000477928 MAPK4P31152 587 aa16.44■□□□□ 0.22
SOX2-OT-208ENST00000477928 NT5C2P49902 561 aa16.44■□□□□ 0.22
SOX2-OT-208ENST00000477928 CTDSPL2Q05D32 466 aa16.44■□□□□ 0.22
SOX2-OT-208ENST00000477928 NMIQ13287 307 aaPredicted RBP16.44■□□□□ 0.22
SOX2-OT-208ENST00000477928 ALX1Q15699 326 aa16.44■□□□□ 0.22
SOX2-OT-208ENST00000477928 FAM47AQ5JRC9 791 aa16.44■□□□□ 0.22
SOX2-OT-208ENST00000477928 PLEKHH3Q7Z736 793 aa16.44■□□□□ 0.22
SOX2-OT-208ENST00000477928 CHMP4CQ96CF2 233 aa16.44■□□□□ 0.22
SOX2-OT-208ENST00000477928 MOV10L1Q9BXT6 1211 aaKnown RBP16.44■□□□□ 0.22
SOX2-OT-208ENST00000477928 NAPBQ9H115 298 aa16.44■□□□□ 0.22
SOX2-OT-208ENST00000477928 MKNK2Q9HBH9 465 aa16.44■□□□□ 0.22
SOX2-OT-208ENST00000477928 FLRT1Q9NZU1 646 aa16.44■□□□□ 0.22
SOX2-OT-208ENST00000477928 SYNPO2Q9UMS6 1093 aa16.44■□□□□ 0.22
SOX2-OT-208ENST00000477928 PLXNB2O15031 1838 aa16.44■□□□□ 0.22
SOX2-OT-208ENST00000477928 FLOT1O75955 427 aa16.43■□□□□ 0.22
SOX2-OT-208ENST00000477928 PDE4AP27815 886 aa16.43■□□□□ 0.22
SOX2-OT-208ENST00000477928 PDE4BQ07343 736 aa16.43■□□□□ 0.22
SOX2-OT-208ENST00000477928 PPARAQ07869 468 aa16.43■□□□□ 0.22
SOX2-OT-208ENST00000477928 COG2Q14746 738 aa16.43■□□□□ 0.22
SOX2-OT-208ENST00000477928 PPP4R3BQ5MIZ7 849 aa16.43■□□□□ 0.22
SOX2-OT-208ENST00000477928 FAM83BQ5T0W9 1011 aa16.43■□□□□ 0.22
SOX2-OT-208ENST00000477928 PRPF38BQ5VTL8 546 aaKnown RBP16.43■□□□□ 0.22
SOX2-OT-208ENST00000477928 RASGRP2Q7LDG7 609 aa16.43■□□□□ 0.22
SOX2-OT-208ENST00000477928 UBE2Q1Q7Z7E8 422 aa16.43■□□□□ 0.22
SOX2-OT-208ENST00000477928 NUDT12Q9BQG2 462 aa16.43■□□□□ 0.22
SOX2-OT-208ENST00000477928 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.43■□□□□ 0.22
SOX2-OT-208ENST00000477928 PAK6Q9NQU5 681 aaPredicted RBP16.43■□□□□ 0.22
SOX2-OT-208ENST00000477928 GREB1LQ9C091 1923 aaPredicted RBP16.43■□□□□ 0.22
SOX2-OT-208ENST00000477928 DSG3P32926 999 aa16.42■□□□□ 0.22
SOX2-OT-208ENST00000477928 CCAR1Q8IX12 1150 aaKnown RBP16.42■□□□□ 0.22
SOX2-OT-208ENST00000477928 LRRC47Q8N1G4 583 aaKnown RBP16.42■□□□□ 0.22
SOX2-OT-208ENST00000477928 NKX2-3Q8TAU0 364 aa16.42■□□□□ 0.22
SOX2-OT-208ENST00000477928 DIS3LQ8TF46 1054 aaKnown RBP16.42■□□□□ 0.22
SOX2-OT-208ENST00000477928 RILPL2Q969X0 211 aa16.42■□□□□ 0.22
SOX2-OT-208ENST00000477928 CEP95Q96GE4 821 aa16.42■□□□□ 0.22
SOX2-OT-208ENST00000477928 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
SOX2-OT-208ENST00000477928 WDR46O15213 610 aaKnown RBP16.41■□□□□ 0.22
SOX2-OT-208ENST00000477928 NMT2O60551 498 aa16.41■□□□□ 0.22
SOX2-OT-208ENST00000477928 SGPL1O95470 568 aa16.41■□□□□ 0.22
SOX2-OT-208ENST00000477928 PCP11498 1178 aaKnown RBP16.41■□□□□ 0.22
SOX2-OT-208ENST00000477928 PRKAR2AP13861 404 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms