RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PNMA1Q8ND90 353 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 NKX2-3Q8TAU0 364 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 CCDC12Q8WUD4 166 aaPredicted RBP9.15□□□□□ -0.94
VMA21-203ENST00000477649 MRPS27Q92552 414 aaKnown RBP9.15□□□□□ -0.94
VMA21-203ENST00000477649 CCDC34Q96HJ3 373 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 PGBD1Q96JS3 809 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 TIGD1Q96MW7 591 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 PPP1R9BQ96SB3 815 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 MYL10Q9BUA6 226 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 IDI2Q9BXS1 227 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 TNMDQ9H2S6 317 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 DACT1Q9NYF0 836 aa9.15□□□□□ -0.94
VMA21-203ENST00000477649 NOL7Q9UMY1 257 aaKnown RBP9.15□□□□□ -0.94
VMA21-203ENST00000477649 SNED1Q8TER0 1413 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 FAM237AA0A1B0GTK4 181 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 hCG_1984214I3L0E3 225 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 ECE2O60344 883 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 CUTAO60888 179 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 KRT2P35908 639 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 CRKP46108 304 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 GABPAQ06546 454 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 DOK7Q18PE1 504 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 FAM47AQ5JRC9 791 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 DACT2Q5SW24 774 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 RCSD1Q6JBY9 416 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 SASS6Q6UVJ0 657 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 RAB11FIP4Q86YS3 637 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 FOXP4Q8IVH2 680 aaPredicted RBP9.14□□□□□ -0.95
VMA21-203ENST00000477649 CCAR1Q8IX12 1150 aaKnown RBP9.14□□□□□ -0.95
VMA21-203ENST00000477649 DIS3L2Q8IYB7 885 aaKnown RBP9.14□□□□□ -0.95
VMA21-203ENST00000477649 CERS5Q8N5B7 392 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 ZNF713Q8N859 430 aaPredicted RBP9.14□□□□□ -0.95
VMA21-203ENST00000477649 CCDC148Q8NFR7 591 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 FBXW7Q969H0 707 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 FUCA2Q9BTY2 467 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 USP40Q9NVE5 1235 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 SERPINB13Q9UIV8 391 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 HOOK1Q9UJC3 728 aaKnown RBP9.14□□□□□ -0.95
VMA21-203ENST00000477649 SYNPO2Q9UMS6 1093 aa9.14□□□□□ -0.95
VMA21-203ENST00000477649 COL2A1P02458 1487 aaPredicted RBP9.14□□□□□ -0.95
VMA21-203ENST00000477649 MYH2Q9UKX2 1941 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 NAV1Q8NEY1 1877 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 CNTNAP5Q8WYK1 1306 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 ENTPD3O75355 529 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 WDHD1O75717 1129 aaPredicted RBP9.13□□□□□ -0.95
VMA21-203ENST00000477649 SCG2P13521 617 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 LIG1P18858 919 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 POLD1P28340 1107 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 PTGER2P43116 358 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 PLCD1P51178 756 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 FOSBP53539 338 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 PFKFB3Q16875 520 aaPredicted RBP9.13□□□□□ -0.95
VMA21-203ENST00000477649 APOBEC3HQ6NTF7 200 aaKnown RBP9.13□□□□□ -0.95
VMA21-203ENST00000477649 STK11IPQ8N1F8 1099 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 ENGASEQ8NFI3 743 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 TRIM44Q96DX7 344 aaPredicted RBP9.13□□□□□ -0.95
VMA21-203ENST00000477649 PYM1Q9BRP8 204 aaKnown RBP9.13□□□□□ -0.95
VMA21-203ENST00000477649 PHF20Q9BVI0 1012 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 SPZ1Q9BXG8 430 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 OSBPL5Q9H0X9 879 aaPredicted RBP9.13□□□□□ -0.95
VMA21-203ENST00000477649 RBSNQ9H1K0 784 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 IL17RBQ9NRM6 502 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 HDAC9Q9UKV0 1011 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 PCDHA7Q9UN72 937 aa9.13□□□□□ -0.95
VMA21-203ENST00000477649 V9GY48 417 aaPredicted RBP9.13□□□□□ -0.95
VMA21-203ENST00000477649 DDX60LQ5H9U9 1706 aaKnown RBP9.12□□□□□ -0.95
VMA21-203ENST00000477649 TCHHQ07283 1943 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 BAZ2AQ9UIF9 1905 aaKnown RBP9.12□□□□□ -0.95
VMA21-203ENST00000477649 PALM3A6NDB9 673 aaPredicted RBP9.12□□□□□ -0.95
VMA21-203ENST00000477649 KIF28PB7ZC32 967 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 PPIP5K2O43314 1243 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 PARP1P09874 1014 aaKnown RBP9.12□□□□□ -0.95
VMA21-203ENST00000477649 CHRNA5P30532 468 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 PTPAQ15257 358 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 PKN1Q16512 942 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 ASPRV1Q53RT3 343 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 OTUD7BQ6GQQ9 843 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 CDC42EP5Q6NZY7 148 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 TEX2Q8IWB9 1127 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 KRI1Q8N9T8 703 aaKnown RBP9.12□□□□□ -0.95
VMA21-203ENST00000477649 FSIP1Q8NA03 581 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 DAGLBQ8NCG7 672 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 FERMT2Q96AC1 680 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 DYNLL2Q96FJ2 89 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 TMEM47Q9BQJ4 181 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 NAT10Q9H0A0 1025 aaKnown RBP9.12□□□□□ -0.95
VMA21-203ENST00000477649 DBNDD1Q9H9R9 158 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 TMOD2Q9NZR1 351 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 PI4KBQ9UBF8 816 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 SAP30BPQ9UHR5 308 aaKnown RBP9.12□□□□□ -0.95
VMA21-203ENST00000477649 STX8Q9UNK0 236 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 CLIC4Q9Y696 253 aa9.12□□□□□ -0.95
VMA21-203ENST00000477649 IGKV6D-41A0A0C4DH26 115 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 TRIM75PA6NK02 468 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 BTBD18B2RXH4 712 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 DTNBO60941 627 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 NR1I2O75469 434 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 PLEKHA8P1O95397 391 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 TTLL1O95922 423 aa9.11□□□□□ -0.95
VMA21-203ENST00000477649 CEBPZQ03701 1054 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms