RNA–Protein interactions for RNA: ENST00000477563.6

RBBP4-211, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-211ENST00000477563 SHROOM1Q2M3G4 852 aaPredicted RBP9.37□□□□□ -0.91
RBBP4-211ENST00000477563 C1orf53Q5VUE5 145 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 MFSD14CQ5VZR4 134 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 ZKSCAN2Q63HK3 967 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 NAA16Q6N069 864 aaPredicted RBP9.37□□□□□ -0.91
RBBP4-211ENST00000477563 CATSPERGQ6ZRH7 1159 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 ADGRA1Q86SQ6 560 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 TGFBRAP1Q8WUH2 860 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 NOL10Q9BSC4 688 aaKnown RBP9.37□□□□□ -0.91
RBBP4-211ENST00000477563 SENP6Q9GZR1 1112 aaPredicted RBP9.37□□□□□ -0.91
RBBP4-211ENST00000477563 KIAA1683Q9H0B3 1180 aa9.37□□□□□ -0.91
RBBP4-211ENST00000477563 AATFQ9NY61 560 aaKnown RBP eCLIP9.37□□□□□ -0.91
RBBP4-211ENST00000477563 CHD9Q3L8U1 2897 aa9.36□□□□□ -0.91
RBBP4-211ENST00000477563 PARP14Q460N5 1801 aa9.36□□□□□ -0.91
RBBP4-211ENST00000477563 GDF11O95390 407 aa9.36□□□□□ -0.91
RBBP4-211ENST00000477563 CYP2E1P05181 493 aaPredicted RBP9.36□□□□□ -0.91
RBBP4-211ENST00000477563 MS4A1P11836 297 aa9.36□□□□□ -0.91
RBBP4-211ENST00000477563 USP14P54578 494 aa9.36□□□□□ -0.91
RBBP4-211ENST00000477563 GORABQ5T7V8 394 aa9.36□□□□□ -0.91
RBBP4-211ENST00000477563 ZNF697Q5TEC3 545 aa9.36□□□□□ -0.91
RBBP4-211ENST00000477563 TMED8Q6PL24 325 aaPredicted RBP9.36□□□□□ -0.91
RBBP4-211ENST00000477563 CERS3Q8IU89 383 aa9.36□□□□□ -0.91
RBBP4-211ENST00000477563 MAPKAPK5Q8IW41 473 aa9.36□□□□□ -0.91
RBBP4-211ENST00000477563 CCAR1Q8IX12 1150 aaKnown RBP9.36□□□□□ -0.91
RBBP4-211ENST00000477563 CRACR2BQ8N4Y2 399 aaPredicted RBP9.36□□□□□ -0.91
RBBP4-211ENST00000477563 FBXO22Q8NEZ5 403 aa9.36□□□□□ -0.91
RBBP4-211ENST00000477563 LBHD1Q9BQE6 289 aaPredicted RBP9.36□□□□□ -0.91
RBBP4-211ENST00000477563 PAGR1Q9BTK6 254 aa9.36□□□□□ -0.91
RBBP4-211ENST00000477563 EHD4Q9H223 541 aa9.36□□□□□ -0.91
RBBP4-211ENST00000477563 PLSCR2Q9NRY7 297 aa9.36□□□□□ -0.91
RBBP4-211ENST00000477563 PALD1Q9ULE6 856 aa9.36□□□□□ -0.91
RBBP4-211ENST00000477563 REV3LO60673 3130 aa9.35□□□□□ -0.91
RBBP4-211ENST00000477563 PNMA6EA0A0J9YXQ4 647 aa9.35□□□□□ -0.91
RBBP4-211ENST00000477563 STRNO43815 780 aa9.35□□□□□ -0.91
RBBP4-211ENST00000477563 GH2P01242 217 aa9.35□□□□□ -0.91
RBBP4-211ENST00000477563 HLA-DOAP06340 250 aa9.35□□□□□ -0.91
RBBP4-211ENST00000477563 CYBAP13498 195 aa9.35□□□□□ -0.91
RBBP4-211ENST00000477563 SMAD3P84022 425 aaKnown RBP9.35□□□□□ -0.91
RBBP4-211ENST00000477563 OLFML2BQ68BL8 750 aa9.35□□□□□ -0.91
RBBP4-211ENST00000477563 SLC39A5Q6ZMH5 540 aa9.35□□□□□ -0.91
RBBP4-211ENST00000477563 TRPV1Q8NER1 839 aa9.35□□□□□ -0.91
RBBP4-211ENST00000477563 NPLOC4Q8TAT6 608 aa9.35□□□□□ -0.91
RBBP4-211ENST00000477563 CDX2Q99626 313 aaPredicted RBP9.35□□□□□ -0.91
RBBP4-211ENST00000477563 MFRPQ9BY79 579 aa9.35□□□□□ -0.91
RBBP4-211ENST00000477563 SEMA6BQ9H3T3 888 aa9.35□□□□□ -0.91
RBBP4-211ENST00000477563 BTBD7Q9P203 1132 aa9.35□□□□□ -0.91
RBBP4-211ENST00000477563 TMEM265A0A087WTH1 108 aa9.34□□□□□ -0.91
RBBP4-211ENST00000477563 SPDYE16A6NNV3 312 aaPredicted RBP9.34□□□□□ -0.91
RBBP4-211ENST00000477563 BCAR3O75815 825 aa9.34□□□□□ -0.91
RBBP4-211ENST00000477563 GNAI2P04899 355 aa9.34□□□□□ -0.91
RBBP4-211ENST00000477563 VCAM1P19320 739 aa9.34□□□□□ -0.91
RBBP4-211ENST00000477563 RTP1P59025 263 aa9.34□□□□□ -0.91
RBBP4-211ENST00000477563 ATP2B2Q01814 1243 aa9.34□□□□□ -0.91
RBBP4-211ENST00000477563 G3BP1Q13283 466 aaKnown RBP eCLIP9.34□□□□□ -0.91
RBBP4-211ENST00000477563 SHHQ15465 462 aa9.34□□□□□ -0.91
RBBP4-211ENST00000477563 CCDC158Q5M9N0 1113 aa9.34□□□□□ -0.91
RBBP4-211ENST00000477563 HS6ST3Q8IZP7 471 aa9.34□□□□□ -0.91
RBBP4-211ENST00000477563 ARRDC4Q8NCT1 418 aa9.34□□□□□ -0.91
RBBP4-211ENST00000477563 BBXQ8WY36 941 aaPredicted RBP9.34□□□□□ -0.91
RBBP4-211ENST00000477563 TRIM34Q9BYJ4 488 aa9.34□□□□□ -0.91
RBBP4-211ENST00000477563 PRKAG2Q9UGJ0 569 aa9.34□□□□□ -0.91
RBBP4-211ENST00000477563 SERPINB13Q9UIV8 391 aa9.34□□□□□ -0.91
RBBP4-211ENST00000477563 SMCHD1A6NHR9 2005 aa9.34□□□□□ -0.91
RBBP4-211ENST00000477563 XIRP2A4UGR9 3374 aa9.33□□□□□ -0.92
RBBP4-211ENST00000477563 SEPT4O43236 478 aa9.33□□□□□ -0.92
RBBP4-211ENST00000477563 CYP2C19P33261 490 aa9.33□□□□□ -0.92
RBBP4-211ENST00000477563 TNNI3KQ59H18 835 aa9.33□□□□□ -0.92
RBBP4-211ENST00000477563 FTSJ3Q8IY81 847 aaKnown RBP9.33□□□□□ -0.92
RBBP4-211ENST00000477563 SHCBP1Q8NEM2 672 aa9.33□□□□□ -0.92
RBBP4-211ENST00000477563 FAM161BQ96MY7 647 aa9.33□□□□□ -0.92
RBBP4-211ENST00000477563 TTYH1Q9H313 450 aaPredicted RBP9.33□□□□□ -0.92
RBBP4-211ENST00000477563 PRDM6Q9NQX0 595 aa9.33□□□□□ -0.92
RBBP4-211ENST00000477563 IVNS1ABPQ9Y6Y0 642 aa9.33□□□□□ -0.92
RBBP4-211ENST00000477563 FPGT-TNNI3KV9GXZ4 949 aa9.33□□□□□ -0.92
RBBP4-211ENST00000477563 PLXNA1Q9UIW2 1896 aa9.33□□□□□ -0.92
RBBP4-211ENST00000477563 NAV1Q8NEY1 1877 aa9.32□□□□□ -0.92
RBBP4-211ENST00000477563 GUCY1A2P33402 732 aa9.32□□□□□ -0.92
RBBP4-211ENST00000477563 ZAP70P43403 619 aa9.32□□□□□ -0.92
RBBP4-211ENST00000477563 DYNLL1P63167 89 aaKnown RBP9.32□□□□□ -0.92
RBBP4-211ENST00000477563 GABPAQ06546 454 aa9.32□□□□□ -0.92
RBBP4-211ENST00000477563 COG2Q14746 738 aa9.32□□□□□ -0.92
RBBP4-211ENST00000477563 ABCB5Q2M3G0 1257 aa9.32□□□□□ -0.92
RBBP4-211ENST00000477563 CERKLQ49MI3 558 aaPredicted RBP9.32□□□□□ -0.92
RBBP4-211ENST00000477563 TTC39AQ5SRH9 613 aa9.32□□□□□ -0.92
RBBP4-211ENST00000477563 C9orf50Q5SZB4 431 aa9.32□□□□□ -0.92
RBBP4-211ENST00000477563 TTC6Q86TZ1 520 aa9.32□□□□□ -0.92
RBBP4-211ENST00000477563 ABRAQ8N0Z2 381 aa9.32□□□□□ -0.92
RBBP4-211ENST00000477563 MAFAQ8NHW3 353 aaPredicted RBP9.32□□□□□ -0.92
RBBP4-211ENST00000477563 ACER1Q8TDN7 264 aa9.32□□□□□ -0.92
RBBP4-211ENST00000477563 SSH3Q8TE77 659 aa9.32□□□□□ -0.92
RBBP4-211ENST00000477563 FRAT1Q92837 279 aaPredicted RBP9.32□□□□□ -0.92
RBBP4-211ENST00000477563 DBNDD2Q9BQY9 259 aa9.32□□□□□ -0.92
RBBP4-211ENST00000477563 CHMP4BQ9H444 224 aaKnown RBP9.32□□□□□ -0.92
RBBP4-211ENST00000477563 RPAP3Q9H6T3 665 aaPredicted RBP9.32□□□□□ -0.92
RBBP4-211ENST00000477563 CWC22Q9HCG8 908 aaKnown RBP9.32□□□□□ -0.92
RBBP4-211ENST00000477563 PIH1D3Q9NQM4 214 aaKnown RBP9.32□□□□□ -0.92
RBBP4-211ENST00000477563 PDLIM7Q9NR12 457 aa9.32□□□□□ -0.92
RBBP4-211ENST00000477563 SNRKQ9NRH2 765 aa9.32□□□□□ -0.92
RBBP4-211ENST00000477563 HOXC10Q9NYD6 342 aa9.32□□□□□ -0.92
RBBP4-211ENST00000477563 SAP30BPQ9UHR5 308 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms