RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 USP17L11C9JVI0 530 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 USP17L18D6R9N7 530 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 USP17L22D6RA61 530 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 USP17L17D6RBQ6 530 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 USP17L19D6RCP7 530 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 USP17L20D6RJB6 530 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 HSPD1P10809 573 aaKnown RBP21.04■□□□□ 0.96
PTPN7-209ENST00000477554 ELNP15502 786 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 GCLCP48506 637 aaPredicted RBP21.04■□□□□ 0.96
PTPN7-209ENST00000477554 FLT3LGP49771 235 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 USP14P54578 494 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 USP17L24Q0WX57 530 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 MTFR1Q15390 333 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 SLC9C1Q4G0N8 1177 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 CWC27Q6UX04 472 aaKnown RBP21.04■□□□□ 0.96
PTPN7-209ENST00000477554 NBPF3Q9H094 633 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 TMX2Q9Y320 296 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 MYH4Q9Y623 1939 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 TNPO2O14787 897 aaKnown RBP21.04■□□□□ 0.96
PTPN7-209ENST00000477554 FGAP02671 866 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 RGS19P49795 217 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 TTC22Q5TAA0 569 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 NUP88Q99567 741 aaPredicted RBP21.04■□□□□ 0.96
PTPN7-209ENST00000477554 VCPKMTQ9H867 229 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 NMT2O60551 498 aa21.03■□□□□ 0.96
PTPN7-209ENST00000477554 HAND2P61296 217 aa21.03■□□□□ 0.96
PTPN7-209ENST00000477554 CHMP4CQ96CF2 233 aa21.03■□□□□ 0.96
PTPN7-209ENST00000477554 CEP95Q96GE4 821 aa21.03■□□□□ 0.96
PTPN7-209ENST00000477554 NACAP1Q9BZK3 213 aa21.03■□□□□ 0.96
PTPN7-209ENST00000477554 FBXO28Q9NVF7 368 aa21.03■□□□□ 0.96
PTPN7-209ENST00000477554 GJD2Q9UKL4 321 aa21.03■□□□□ 0.96
PTPN7-209ENST00000477554 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.03■□□□□ 0.96
PTPN7-209ENST00000477554 CCDC171Q6TFL3 1326 aa21.03■□□□□ 0.96
PTPN7-209ENST00000477554 A0A0G2JMZ2 1700 aa21.02■□□□□ 0.96
PTPN7-209ENST00000477554 ERVK-9P63128 1117 aa21.02■□□□□ 0.96
PTPN7-209ENST00000477554 ERVK-24P63145 666 aa21.02■□□□□ 0.96
PTPN7-209ENST00000477554 SAMD1Q6SPF0 538 aaPredicted RBP21.02■□□□□ 0.96
PTPN7-209ENST00000477554 RASGRP2Q7LDG7 609 aa21.02■□□□□ 0.96
PTPN7-209ENST00000477554 RAET1EQ8TD07 263 aa21.02■□□□□ 0.96
PTPN7-209ENST00000477554 TANGO6Q9C0B7 1094 aa21.02■□□□□ 0.96
PTPN7-209ENST00000477554 KANSL2Q9H9L4 492 aa21.02■□□□□ 0.96
PTPN7-209ENST00000477554 ARHGEF10LQ9HCE6 1279 aa21.02■□□□□ 0.96
PTPN7-209ENST00000477554 COL11A1P12107 1806 aaPredicted RBP21.02■□□□□ 0.95
PTPN7-209ENST00000477554 KIAA0100Q14667 2235 aaKnown RBP21.01■□□□□ 0.95
PTPN7-209ENST00000477554 GNRH1P01148 92 aa21.01■□□□□ 0.95
PTPN7-209ENST00000477554 GPRC5AQ8NFJ5 357 aa21.01■□□□□ 0.95
PTPN7-209ENST00000477554 TAOK2Q9UL54 1235 aa21.01■□□□□ 0.95
PTPN7-209ENST00000477554 RAD21O60216 631 aa21■□□□□ 0.95
PTPN7-209ENST00000477554 EN2P19622 333 aaPredicted RBP21■□□□□ 0.95
PTPN7-209ENST00000477554 TRIM32Q13049 653 aa21■□□□□ 0.95
PTPN7-209ENST00000477554 ARHGEF6Q15052 776 aa21■□□□□ 0.95
PTPN7-209ENST00000477554 ALX1Q15699 326 aa21■□□□□ 0.95
PTPN7-209ENST00000477554 LRRC47Q8N1G4 583 aaKnown RBP21■□□□□ 0.95
PTPN7-209ENST00000477554 ATG4CQ96DT6 458 aa21■□□□□ 0.95
PTPN7-209ENST00000477554 CLIP2Q9UDT6 1046 aa21■□□□□ 0.95
PTPN7-209ENST00000477554 RBBP6Q7Z6E9 1792 aaKnown RBP21■□□□□ 0.95
PTPN7-209ENST00000477554 GRK4P32298 578 aa20.99■□□□□ 0.95
PTPN7-209ENST00000477554 TFAP4Q01664 338 aa20.99■□□□□ 0.95
PTPN7-209ENST00000477554 FAM83BQ5T0W9 1011 aa20.99■□□□□ 0.95
PTPN7-209ENST00000477554 TBC1D10CQ8IV04 446 aa20.99■□□□□ 0.95
PTPN7-209ENST00000477554 IL17RBQ9NRM6 502 aa20.99■□□□□ 0.95
PTPN7-209ENST00000477554 ADCY3O60266 1144 aa20.98■□□□□ 0.95
PTPN7-209ENST00000477554 ZNF444Q8N0Y2 327 aaPredicted RBP20.98■□□□□ 0.95
PTPN7-209ENST00000477554 MTMR4Q9NYA4 1195 aa20.98■□□□□ 0.95
PTPN7-209ENST00000477554 ANAPC4Q9UJX5 808 aa20.98■□□□□ 0.95
PTPN7-209ENST00000477554 PLIN4Q96Q06 1357 aa20.97■□□□□ 0.95
PTPN7-209ENST00000477554 FLOT1O75955 427 aa20.97■□□□□ 0.95
PTPN7-209ENST00000477554 NDUFB10O96000 172 aa20.97■□□□□ 0.95
PTPN7-209ENST00000477554 HOXD10P28358 340 aa20.97■□□□□ 0.95
PTPN7-209ENST00000477554 PRMT2P55345 433 aa20.97■□□□□ 0.95
PTPN7-209ENST00000477554 NEDD1Q8NHV4 660 aa20.97■□□□□ 0.95
PTPN7-209ENST00000477554 DIAPH3Q9NSV4 1193 aa20.97■□□□□ 0.95
PTPN7-209ENST00000477554 NYAP2Q9P242 653 aa20.97■□□□□ 0.95
PTPN7-209ENST00000477554 RABGAP1Q9Y3P9 1069 aa20.97■□□□□ 0.95
PTPN7-209ENST00000477554 CYP2B6P20813 491 aa20.96■□□□□ 0.95
PTPN7-209ENST00000477554 DSG3P32926 999 aa20.96■□□□□ 0.95
PTPN7-209ENST00000477554 PDE4BQ07343 736 aa20.96■□□□□ 0.95
PTPN7-209ENST00000477554 COG2Q14746 738 aa20.96■□□□□ 0.95
PTPN7-209ENST00000477554 LBX2Q6XYB7 198 aa20.96■□□□□ 0.95
PTPN7-209ENST00000477554 GPR142Q7Z601 462 aa20.96■□□□□ 0.95
PTPN7-209ENST00000477554 LPAR1Q92633 364 aa20.96■□□□□ 0.95
PTPN7-209ENST00000477554 COA7Q96BR5 231 aa20.96■□□□□ 0.95
PTPN7-209ENST00000477554 LAMA4Q16363 1823 aa20.96■□□□□ 0.95
PTPN7-209ENST00000477554 F5H6K3 240 aa20.95■□□□□ 0.95
PTPN7-209ENST00000477554 WDR46O15213 610 aaKnown RBP20.95■□□□□ 0.95
PTPN7-209ENST00000477554 FGRP09769 529 aa20.95■□□□□ 0.95
PTPN7-209ENST00000477554 TSPY3P0CV98 308 aa20.95■□□□□ 0.95
PTPN7-209ENST00000477554 TSPY8P0CW00 308 aa20.95■□□□□ 0.95
PTPN7-209ENST00000477554 MLLT1Q03111 559 aaPredicted RBP20.95■□□□□ 0.95
PTPN7-209ENST00000477554 KLRC3Q07444 240 aa20.95■□□□□ 0.95
PTPN7-209ENST00000477554 UNC93B1Q9H1C4 597 aa20.95■□□□□ 0.95
PTPN7-209ENST00000477554 NEDD4P46934 1319 aa20.95■□□□□ 0.94
PTPN7-209ENST00000477554 INHAP05111 366 aa20.95■□□□□ 0.94
PTPN7-209ENST00000477554 CCL14Q16627 93 aa20.95■□□□□ 0.94
PTPN7-209ENST00000477554 RRP12Q5JTH9 1297 aaKnown RBP20.95■□□□□ 0.94
PTPN7-209ENST00000477554 USP6NLQ92738 828 aa20.95■□□□□ 0.94
PTPN7-209ENST00000477554 MOV10L1Q9BXT6 1211 aaKnown RBP20.95■□□□□ 0.94
PTPN7-209ENST00000477554 RANBP6O60518 1105 aaKnown RBP20.94■□□□□ 0.94
PTPN7-209ENST00000477554 IRF5Q13568 498 aa20.94■□□□□ 0.94
PTPN7-209ENST00000477554 TMEM132BQ14DG7 1078 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms