RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 BCRP11274 1271 aa20.56■□□□□ 0.88
VARS2-209ENST00000477288 KRT15P19012 456 aa20.56■□□□□ 0.88
VARS2-209ENST00000477288 SLC12A2P55011 1212 aa20.56■□□□□ 0.88
VARS2-209ENST00000477288 ARHGEF16Q5VV41 709 aa20.56■□□□□ 0.88
VARS2-209ENST00000477288 GBP7Q8N8V2 638 aaPredicted RBP20.56■□□□□ 0.88
VARS2-209ENST00000477288 ORAI2Q96SN7 254 aa20.56■□□□□ 0.88
VARS2-209ENST00000477288 BUB1BO60566 1050 aaPredicted RBP20.56■□□□□ 0.88
VARS2-209ENST00000477288 KIF22Q14807 665 aa20.56■□□□□ 0.88
VARS2-209ENST00000477288 RSPH3Q86UC2 560 aa20.56■□□□□ 0.88
VARS2-209ENST00000477288 CCDC89Q8N998 374 aa20.56■□□□□ 0.88
VARS2-209ENST00000477288 DEPTORQ8TB45 409 aa20.56■□□□□ 0.88
VARS2-209ENST00000477288 YARSP54577 528 aaKnown RBP20.56■□□□□ 0.88
VARS2-209ENST00000477288 ARHGAP44Q17R89 818 aa20.56■□□□□ 0.88
VARS2-209ENST00000477288 B4GALNT4Q76KP1 1039 aa20.56■□□□□ 0.88
VARS2-209ENST00000477288 PLEKHA4Q9H4M7 779 aa20.56■□□□□ 0.88
VARS2-209ENST00000477288 TBC1D8O95759 1140 aa20.56■□□□□ 0.88
VARS2-209ENST00000477288 P4HA1P13674 534 aa20.56■□□□□ 0.88
VARS2-209ENST00000477288 LMNTD2Q8IXW0 634 aa20.56■□□□□ 0.88
VARS2-209ENST00000477288 GOLGA6CA6NDK9 693 aa20.55■□□□□ 0.88
VARS2-209ENST00000477288 GOLGA6DP0CG33 693 aa20.55■□□□□ 0.88
VARS2-209ENST00000477288 FAM102BQ5T8I3 360 aa20.55■□□□□ 0.88
VARS2-209ENST00000477288 OTUD6AQ7L8S5 288 aa20.55■□□□□ 0.88
VARS2-209ENST00000477288 CCDC94Q9BW85 323 aaPredicted RBP20.55■□□□□ 0.88
VARS2-209ENST00000477288 GOLGA6AQ9NYA3 693 aa20.55■□□□□ 0.88
VARS2-209ENST00000477288 GADL1Q6ZQY3 521 aa20.55■□□□□ 0.88
VARS2-209ENST00000477288 MIER3Q7Z3K6 550 aa20.55■□□□□ 0.88
VARS2-209ENST00000477288 VPS37BQ9H9H4 285 aa20.55■□□□□ 0.88
VARS2-209ENST00000477288 IBTKQ9P2D0 1353 aaPredicted RBP20.55■□□□□ 0.88
VARS2-209ENST00000477288 NPC1L1Q9UHC9 1359 aa20.55■□□□□ 0.88
VARS2-209ENST00000477288 FANCCQ00597 558 aa20.55■□□□□ 0.88
VARS2-209ENST00000477288 NUP58Q9BVL2 599 aa20.55■□□□□ 0.88
VARS2-209ENST00000477288 C8orf34Q49A92 452 aa20.54■□□□□ 0.88
VARS2-209ENST00000477288 TBC1D22AQ8WUA7 517 aa20.54■□□□□ 0.88
VARS2-209ENST00000477288 LLPHQ9BRT6 129 aaKnown RBP20.54■□□□□ 0.88
VARS2-209ENST00000477288 GAS7O60861 476 aa20.54■□□□□ 0.88
VARS2-209ENST00000477288 LGSNQ5TDP6 509 aa20.54■□□□□ 0.88
VARS2-209ENST00000477288 DDX17Q92841 729 aaKnown RBP20.54■□□□□ 0.88
VARS2-209ENST00000477288 SNX14Q9Y5W7 946 aa20.54■□□□□ 0.88
VARS2-209ENST00000477288 SPDYE16A6NNV3 312 aaPredicted RBP20.54■□□□□ 0.88
VARS2-209ENST00000477288 WDR46O15213 610 aaKnown RBP20.54■□□□□ 0.88
VARS2-209ENST00000477288 SPDYE2Q495Y8 402 aa20.54■□□□□ 0.88
VARS2-209ENST00000477288 ST7Q9NRC1 585 aa20.54■□□□□ 0.88
VARS2-209ENST00000477288 CD2APQ9Y5K6 639 aa20.54■□□□□ 0.88
VARS2-209ENST00000477288 BLZF1Q9H2G9 400 aa20.54■□□□□ 0.88
VARS2-209ENST00000477288 MGARPQ8TDB4 240 aa20.54■□□□□ 0.88
VARS2-209ENST00000477288 SMC5Q8IY18 1101 aa20.53■□□□□ 0.88
VARS2-209ENST00000477288 NELFBQ8WX92 580 aa20.53■□□□□ 0.88
VARS2-209ENST00000477288 RILPQ96NA2 401 aa20.53■□□□□ 0.88
VARS2-209ENST00000477288 OGFRQ9NZT2 677 aa20.53■□□□□ 0.88
VARS2-209ENST00000477288 SH2D4BQ5SQS7 431 aa20.53■□□□□ 0.88
VARS2-209ENST00000477288 OTUD7AQ8TE49 926 aaPredicted RBP20.53■□□□□ 0.88
VARS2-209ENST00000477288 CARD6Q9BX69 1037 aa20.53■□□□□ 0.88
VARS2-209ENST00000477288 TCP10L2B9ZVM9 353 aa20.53■□□□□ 0.88
VARS2-209ENST00000477288 KLHL30Q0D2K2 578 aa20.53■□□□□ 0.88
VARS2-209ENST00000477288 TEKT1Q969V4 418 aa20.53■□□□□ 0.88
VARS2-209ENST00000477288 VPS54Q9P1Q0 977 aa20.53■□□□□ 0.88
VARS2-209ENST00000477288 ATP7AQ04656 1500 aa20.52■□□□□ 0.88
VARS2-209ENST00000477288 GNPTABQ3T906 1256 aa20.52■□□□□ 0.88
VARS2-209ENST00000477288 ALAS1P13196 640 aa20.52■□□□□ 0.88
VARS2-209ENST00000477288 IFRD2Q12894 506 aaPredicted RBP20.52■□□□□ 0.88
VARS2-209ENST00000477288 MFSD14BQ5SR56 506 aa20.52■□□□□ 0.88
VARS2-209ENST00000477288 ARHGAP27Q6ZUM4 889 aa20.52■□□□□ 0.88
VARS2-209ENST00000477288 REXO1Q8N1G1 1221 aaKnown RBP20.52■□□□□ 0.88
VARS2-209ENST00000477288 CHURC1Q8WUH1 139 aa20.52■□□□□ 0.88
VARS2-209ENST00000477288 MAGEA1P43355 309 aa20.52■□□□□ 0.88
VARS2-209ENST00000477288 GCKRQ14397 625 aa20.52■□□□□ 0.88
VARS2-209ENST00000477288 RAB3IPQ96QF0 476 aaPredicted RBP20.52■□□□□ 0.88
VARS2-209ENST00000477288 FRMPD2Q68DX3 1309 aaPredicted RBP20.52■□□□□ 0.88
VARS2-209ENST00000477288 KBTBD3Q8NAB2 608 aa20.52■□□□□ 0.88
VARS2-209ENST00000477288 STAMQ92783 540 aa20.52■□□□□ 0.88
VARS2-209ENST00000477288 RBSNQ9H1K0 784 aa20.52■□□□□ 0.88
VARS2-209ENST00000477288 VCXQ9H320 206 aa20.52■□□□□ 0.88
VARS2-209ENST00000477288 ATP10AO60312 1499 aa20.52■□□□□ 0.87
VARS2-209ENST00000477288 NR1I2O75469 434 aa20.52■□□□□ 0.87
VARS2-209ENST00000477288 DPY19L2Q6NUT2 758 aa20.52■□□□□ 0.87
VARS2-209ENST00000477288 ERO1AQ96HE7 468 aa20.52■□□□□ 0.87
VARS2-209ENST00000477288 TNFAIP1Q13829 316 aa20.51■□□□□ 0.87
VARS2-209ENST00000477288 SMCO2A6NFE2 343 aa20.51■□□□□ 0.87
VARS2-209ENST00000477288 YWHAEP62258 255 aaKnown RBP20.51■□□□□ 0.87
VARS2-209ENST00000477288 KRT40Q6A162 431 aa20.51■□□□□ 0.87
VARS2-209ENST00000477288 SFMBT2Q5VUG0 894 aa20.51■□□□□ 0.87
VARS2-209ENST00000477288 FAM173BQ6P4H8 233 aa20.51■□□□□ 0.87
VARS2-209ENST00000477288 PALM3A6NDB9 673 aaPredicted RBP20.51■□□□□ 0.87
VARS2-209ENST00000477288 USP19O94966 1318 aa20.51■□□□□ 0.87
VARS2-209ENST00000477288 SBNO1A3KN83 1393 aa20.51■□□□□ 0.87
VARS2-209ENST00000477288 ZBTB7BO15156 539 aaPredicted RBP20.5■□□□□ 0.87
VARS2-209ENST00000477288 OATP04181 439 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 PEX26Q7Z412 305 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 FAM193BQ96PV7 902 aaPredicted RBP20.5■□□□□ 0.87
VARS2-209ENST00000477288 MAST1Q9Y2H9 1570 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 CYP2J2P51589 502 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 MAP7Q14244 749 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 MLKLQ8NB16 471 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 POSTNQ15063 836 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 CTAGE3PQ8IX95 158 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 ANKRD42Q8N9B4 389 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 RASSF4Q9H2L5 321 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 PCDHB13Q9Y5F0 798 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 ZNF202O95125 648 aa20.5■□□□□ 0.87
VARS2-209ENST00000477288 PPARAQ07869 468 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms