RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 SLC44A5Q8NCS7 719 aa20.57■□□□□ 0.88
SMARCD3-210ENST00000477169 CCDC17Q96LX7 622 aa20.57■□□□□ 0.88
SMARCD3-210ENST00000477169 PAGR1Q9BTK6 254 aa20.57■□□□□ 0.88
SMARCD3-210ENST00000477169 PAK6Q9NQU5 681 aaPredicted RBP20.57■□□□□ 0.88
SMARCD3-210ENST00000477169 A0A0D9SFI3 127 aa20.56■□□□□ 0.88
SMARCD3-210ENST00000477169 A0A1W2PRG0 241 aa20.56■□□□□ 0.88
SMARCD3-210ENST00000477169 GPAA1O43292 621 aa20.56■□□□□ 0.88
SMARCD3-210ENST00000477169 XRCC5P13010 732 aaKnown RBP20.56■□□□□ 0.88
SMARCD3-210ENST00000477169 BMP2KLQ5H9B9 411 aa20.56■□□□□ 0.88
SMARCD3-210ENST00000477169 SOCS4Q8WXH5 440 aa20.56■□□□□ 0.88
SMARCD3-210ENST00000477169 HELLSQ9NRZ9 838 aa20.56■□□□□ 0.88
SMARCD3-210ENST00000477169 BAZ2AQ9UIF9 1905 aaKnown RBP20.56■□□□□ 0.88
SMARCD3-210ENST00000477169 PLXNB2O15031 1838 aa20.55■□□□□ 0.88
SMARCD3-210ENST00000477169 CYP2B6P20813 491 aa20.55■□□□□ 0.88
SMARCD3-210ENST00000477169 CDK8P49336 464 aa20.55■□□□□ 0.88
SMARCD3-210ENST00000477169 CCNA1P78396 465 aa20.55■□□□□ 0.88
SMARCD3-210ENST00000477169 CTR9Q6PD62 1173 aa20.55■□□□□ 0.88
SMARCD3-210ENST00000477169 C16orf86Q6ZW13 317 aa20.55■□□□□ 0.88
SMARCD3-210ENST00000477169 GPR142Q7Z601 462 aa20.55■□□□□ 0.88
SMARCD3-210ENST00000477169 DEFB118Q96PH6 123 aa20.55■□□□□ 0.88
SMARCD3-210ENST00000477169 PORCNQ9H237 461 aa20.55■□□□□ 0.88
SMARCD3-210ENST00000477169 RPAP3Q9H6T3 665 aaPredicted RBP20.55■□□□□ 0.88
SMARCD3-210ENST00000477169 CYP2D7A0A087X1C5 515 aa20.54■□□□□ 0.88
SMARCD3-210ENST00000477169 HIP1O00291 1037 aa20.54■□□□□ 0.88
SMARCD3-210ENST00000477169 CNMDO75829 334 aa20.54■□□□□ 0.88
SMARCD3-210ENST00000477169 TFRCP02786 760 aaKnown RBP20.54■□□□□ 0.88
SMARCD3-210ENST00000477169 AKR1B1P15121 316 aa20.54■□□□□ 0.88
SMARCD3-210ENST00000477169 MCMDC2Q4G0Z9 681 aa20.54■□□□□ 0.88
SMARCD3-210ENST00000477169 CCDC129Q6ZRS4 1044 aa20.54■□□□□ 0.88
SMARCD3-210ENST00000477169 PLEKHH3Q7Z736 793 aa20.54■□□□□ 0.88
SMARCD3-210ENST00000477169 TRMT44Q8IYL2 757 aaKnown RBP20.54■□□□□ 0.88
SMARCD3-210ENST00000477169 USP6NLQ92738 828 aa20.54■□□□□ 0.88
SMARCD3-210ENST00000477169 DIAPH3Q9NSV4 1193 aa20.54■□□□□ 0.88
SMARCD3-210ENST00000477169 GTF3C3Q9Y5Q9 886 aa20.54■□□□□ 0.88
SMARCD3-210ENST00000477169 RPTORQ8N122 1335 aa20.53■□□□□ 0.88
SMARCD3-210ENST00000477169 MYH8P13535 1937 aa20.53■□□□□ 0.88
SMARCD3-210ENST00000477169 COG2Q14746 738 aa20.53■□□□□ 0.88
SMARCD3-210ENST00000477169 MORN1Q5T089 497 aa20.53■□□□□ 0.88
SMARCD3-210ENST00000477169 GIMAP6Q6P9H5 292 aa20.53■□□□□ 0.88
SMARCD3-210ENST00000477169 SIAH1Q8IUQ4 282 aa20.53■□□□□ 0.88
SMARCD3-210ENST00000477169 TRIB2Q92519 343 aa20.53■□□□□ 0.88
SMARCD3-210ENST00000477169 HTATIP2Q9BUP3 242 aa20.53■□□□□ 0.88
SMARCD3-210ENST00000477169 CRISPLD2Q9H0B8 497 aa20.53■□□□□ 0.88
SMARCD3-210ENST00000477169 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.53■□□□□ 0.88
SMARCD3-210ENST00000477169 ARHGEF10LQ9HCE6 1279 aa20.53■□□□□ 0.88
SMARCD3-210ENST00000477169 HMX1Q9NP08 348 aaPredicted RBP20.53■□□□□ 0.88
SMARCD3-210ENST00000477169 HOXC10Q9NYD6 342 aa20.53■□□□□ 0.88
SMARCD3-210ENST00000477169 ARPP21Q9UBL0 812 aaPredicted RBP20.53■□□□□ 0.88
SMARCD3-210ENST00000477169 SPDYE16A6NNV3 312 aaPredicted RBP20.52■□□□□ 0.88
SMARCD3-210ENST00000477169 GSG1L2A8MUP6 293 aa20.52■□□□□ 0.88
SMARCD3-210ENST00000477169 SMIM22K7EJ46 135 aa20.52■□□□□ 0.88
SMARCD3-210ENST00000477169 FARP2O94887 1054 aaPredicted RBP20.52■□□□□ 0.88
SMARCD3-210ENST00000477169 GNAT2P19087 354 aa20.52■□□□□ 0.88
SMARCD3-210ENST00000477169 CHMLP26374 656 aa20.52■□□□□ 0.88
SMARCD3-210ENST00000477169 RGS2P41220 211 aa20.52■□□□□ 0.88
SMARCD3-210ENST00000477169 SBK1Q52WX2 424 aa20.52■□□□□ 0.88
SMARCD3-210ENST00000477169 CWC27Q6UX04 472 aaKnown RBP20.52■□□□□ 0.88
SMARCD3-210ENST00000477169 LPAR1Q92633 364 aa20.52■□□□□ 0.88
SMARCD3-210ENST00000477169 DPF3Q92784 378 aa20.52■□□□□ 0.88
SMARCD3-210ENST00000477169 SH2D4AQ9H788 454 aa20.52■□□□□ 0.88
SMARCD3-210ENST00000477169 CWC22Q9HCG8 908 aaKnown RBP20.52■□□□□ 0.88
SMARCD3-210ENST00000477169 TMX2Q9Y320 296 aa20.52■□□□□ 0.88
SMARCD3-210ENST00000477169 ICA1Q05084 483 aa20.51■□□□□ 0.87
SMARCD3-210ENST00000477169 TRIM32Q13049 653 aa20.51■□□□□ 0.87
SMARCD3-210ENST00000477169 ZNF589Q86UQ0 364 aaPredicted RBP20.51■□□□□ 0.87
SMARCD3-210ENST00000477169 BTBD7Q9P203 1132 aa20.51■□□□□ 0.87
SMARCD3-210ENST00000477169 PATL2C9JE40 543 aaKnown RBP20.5■□□□□ 0.87
SMARCD3-210ENST00000477169 MAP3K21Q5TCX8 1036 aa20.5■□□□□ 0.87
SMARCD3-210ENST00000477169 KANSL2Q9H9L4 492 aa20.5■□□□□ 0.87
SMARCD3-210ENST00000477169 FOXP2O15409 715 aa20.49■□□□□ 0.87
SMARCD3-210ENST00000477169 ZKSCAN1P17029 563 aaPredicted RBP20.49■□□□□ 0.87
SMARCD3-210ENST00000477169 MAP2K5Q13163 448 aa20.49■□□□□ 0.87
SMARCD3-210ENST00000477169 KIAA1755Q5JYT7 1200 aa20.49■□□□□ 0.87
SMARCD3-210ENST00000477169 ANKLE1Q8NAG6 615 aa20.49■□□□□ 0.87
SMARCD3-210ENST00000477169 APBA2Q99767 749 aa20.49■□□□□ 0.87
SMARCD3-210ENST00000477169 TANGO6Q9C0B7 1094 aa20.49■□□□□ 0.87
SMARCD3-210ENST00000477169 VCPKMTQ9H867 229 aa20.49■□□□□ 0.87
SMARCD3-210ENST00000477169 EPB41L4AQ9HCS5 686 aaPredicted RBP20.49■□□□□ 0.87
SMARCD3-210ENST00000477169 CCDC171Q6TFL3 1326 aa20.49■□□□□ 0.87
SMARCD3-210ENST00000477169 SLC15A5A6NIM6 579 aa20.48■□□□□ 0.87
SMARCD3-210ENST00000477169 H0YGN5 161 aa20.48■□□□□ 0.87
SMARCD3-210ENST00000477169 PTPREP23469 700 aa20.48■□□□□ 0.87
SMARCD3-210ENST00000477169 HABP4Q5JVS0 413 aaKnown RBP20.48■□□□□ 0.87
SMARCD3-210ENST00000477169 VPS53Q5VIR6 699 aa20.48■□□□□ 0.87
SMARCD3-210ENST00000477169 WDR78Q5VTH9 848 aa20.48■□□□□ 0.87
SMARCD3-210ENST00000477169 CLEC10AQ8IUN9 316 aa20.48■□□□□ 0.87
SMARCD3-210ENST00000477169 IL25Q9H293 177 aa20.48■□□□□ 0.87
SMARCD3-210ENST00000477169 WDR46O15213 610 aaKnown RBP20.47■□□□□ 0.87
SMARCD3-210ENST00000477169 APPP05067 770 aa20.47■□□□□ 0.87
SMARCD3-210ENST00000477169 EEF2P13639 858 aaKnown RBP20.47■□□□□ 0.87
SMARCD3-210ENST00000477169 PRKAR2AP13861 404 aaKnown RBP20.47■□□□□ 0.87
SMARCD3-210ENST00000477169 DSG3P32926 999 aa20.47■□□□□ 0.87
SMARCD3-210ENST00000477169 MFAP1P55081 439 aaKnown RBP20.47■□□□□ 0.87
SMARCD3-210ENST00000477169 IFNL3Q8IZI9 196 aa20.47■□□□□ 0.87
SMARCD3-210ENST00000477169 MB21D1Q8N884 522 aa20.47■□□□□ 0.87
SMARCD3-210ENST00000477169 IVNS1ABPQ9Y6Y0 642 aa20.47■□□□□ 0.87
SMARCD3-210ENST00000477169 MINDY4BA8MYZ0 360 aa20.46■□□□□ 0.87
SMARCD3-210ENST00000477169 CACNB2Q08289 660 aaPredicted RBP20.46■□□□□ 0.87
SMARCD3-210ENST00000477169 CCL14Q16627 93 aa20.46■□□□□ 0.87
SMARCD3-210ENST00000477169 NECAB2Q7Z6G3 386 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms