RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 FBXO3Q9UK99 471 aa18.98■□□□□ 0.63
SMG5-204ENST00000476954 LBX2Q6XYB7 198 aa18.97■□□□□ 0.63
SMG5-204ENST00000476954 FOXP4Q8IVH2 680 aaPredicted RBP18.97■□□□□ 0.63
SMG5-204ENST00000476954 MRPL50Q8N5N7 158 aaKnown RBP18.97■□□□□ 0.63
SMG5-204ENST00000476954 ACER1Q8TDN7 264 aa18.97■□□□□ 0.63
SMG5-204ENST00000476954 KHSRPQ92945 711 aaKnown RBP eCLIP18.97■□□□□ 0.63
SMG5-204ENST00000476954 LENG1Q96BZ8 264 aaPredicted RBP18.97■□□□□ 0.63
SMG5-204ENST00000476954 TRIM34Q9BYJ4 488 aa18.97■□□□□ 0.63
SMG5-204ENST00000476954 C11orf16Q9NQ32 467 aa18.97■□□□□ 0.63
SMG5-204ENST00000476954 AATFQ9NY61 560 aaKnown RBP eCLIP18.97■□□□□ 0.63
SMG5-204ENST00000476954 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.97■□□□□ 0.63
SMG5-204ENST00000476954 CHD7Q9P2D1 2997 aa18.96■□□□□ 0.63
SMG5-204ENST00000476954 PRRC2BQ5JSZ5 2229 aaKnown RBP18.96■□□□□ 0.63
SMG5-204ENST00000476954 A0A1B0GUL7 405 aa18.96■□□□□ 0.63
SMG5-204ENST00000476954 FAM86C2PA6NEL3 165 aa18.96■□□□□ 0.63
SMG5-204ENST00000476954 ACRP10323 421 aa18.96■□□□□ 0.63
SMG5-204ENST00000476954 TMEM31Q5JXX7 168 aa18.96■□□□□ 0.63
SMG5-204ENST00000476954 GINM1Q9NU53 330 aa18.96■□□□□ 0.63
SMG5-204ENST00000476954 FLT1P17948 1338 aa18.96■□□□□ 0.63
SMG5-204ENST00000476954 TIMP1P01033 207 aa18.95■□□□□ 0.62
SMG5-204ENST00000476954 SPATA5Q8NB90 893 aa18.95■□□□□ 0.62
SMG5-204ENST00000476954 RPAP3Q9H6T3 665 aaPredicted RBP18.95■□□□□ 0.62
SMG5-204ENST00000476954 TBX21Q9UL17 535 aa18.95■□□□□ 0.62
SMG5-204ENST00000476954 YBX2Q9Y2T7 364 aaKnown RBP18.95■□□□□ 0.62
SMG5-204ENST00000476954 MYO5AQ9Y4I1 1855 aaKnown RBP18.94■□□□□ 0.62
SMG5-204ENST00000476954 CSF2RAP15509 400 aa18.94■□□□□ 0.62
SMG5-204ENST00000476954 TAL1P17542 331 aaPredicted RBP18.94■□□□□ 0.62
SMG5-204ENST00000476954 ERCC3P19447 782 aa18.94■□□□□ 0.62
SMG5-204ENST00000476954 MFSD5Q6N075 450 aa18.94■□□□□ 0.62
SMG5-204ENST00000476954 ZNF365Q70YC5 407 aa18.94■□□□□ 0.62
SMG5-204ENST00000476954 ANKRD33Q7Z3H0 272 aa18.94■□□□□ 0.62
SMG5-204ENST00000476954 ADGRA1Q86SQ6 560 aa18.94■□□□□ 0.62
SMG5-204ENST00000476954 A0A0G2JMZ2 1700 aa18.94■□□□□ 0.62
SMG5-204ENST00000476954 MYH1P12882 1939 aa18.94■□□□□ 0.62
SMG5-204ENST00000476954 RARBP10826 455 aa18.93■□□□□ 0.62
SMG5-204ENST00000476954 TFCP2Q12800 502 aa18.93■□□□□ 0.62
SMG5-204ENST00000476954 MAML3Q96JK9 1138 aa18.93■□□□□ 0.62
SMG5-204ENST00000476954 LRRC37A2A6NM11 1700 aa18.93■□□□□ 0.62
SMG5-204ENST00000476954 DCDC2CA8MYV0 355 aa18.92■□□□□ 0.62
SMG5-204ENST00000476954 STRNO43815 780 aa18.92■□□□□ 0.62
SMG5-204ENST00000476954 PPIGQ13427 754 aaKnown RBP eCLIP18.92■□□□□ 0.621e-7■■■□□ 15.6
SMG5-204ENST00000476954 MVPQ14764 893 aaKnown RBP18.92■□□□□ 0.62
SMG5-204ENST00000476954 RAB3GAP1Q15042 981 aa18.92■□□□□ 0.62
SMG5-204ENST00000476954 RNF180Q86T96 592 aa18.92■□□□□ 0.62
SMG5-204ENST00000476954 SNX27Q96L92 541 aa18.92■□□□□ 0.62
SMG5-204ENST00000476954 TOX2Q96NM4 488 aa18.92■□□□□ 0.62
SMG5-204ENST00000476954 KIAA1683Q9H0B3 1180 aa18.92■□□□□ 0.62
SMG5-204ENST00000476954 TSPYL2Q9H2G4 693 aaPredicted RBP18.92■□□□□ 0.62
SMG5-204ENST00000476954 MSRAQ9UJ68 235 aa18.92■□□□□ 0.62
SMG5-204ENST00000476954 NEUROD6Q96NK8 337 aa18.91■□□□□ 0.62
SMG5-204ENST00000476954 NOL10Q9BSC4 688 aaKnown RBP18.91■□□□□ 0.62
SMG5-204ENST00000476954 SPATC1LQ9H0A9 340 aa18.91■□□□□ 0.62
SMG5-204ENST00000476954 COPRSQ9NQ92 184 aa18.91■□□□□ 0.62
SMG5-204ENST00000476954 LRP2BPQ9P2M1 347 aa18.91■□□□□ 0.62
SMG5-204ENST00000476954 ADAMTS4O75173 837 aa18.9■□□□□ 0.62
SMG5-204ENST00000476954 ACLYP53396 1101 aa18.9■□□□□ 0.62
SMG5-204ENST00000476954 USP14P54578 494 aa18.9■□□□□ 0.62
SMG5-204ENST00000476954 SKIV2LQ15477 1246 aaKnown RBP18.9■□□□□ 0.62
SMG5-204ENST00000476954 RAB30Q15771 203 aa18.9■□□□□ 0.62
SMG5-204ENST00000476954 PPP1R12CQ9BZL4 782 aa18.9■□□□□ 0.62
SMG5-204ENST00000476954 SLC28A3Q9HAS3 691 aa18.9■□□□□ 0.62
SMG5-204ENST00000476954 STARD7Q9NQZ5 370 aa18.9■□□□□ 0.62
SMG5-204ENST00000476954 UBTFL1P0CB47 393 aaPredicted RBP18.89■□□□□ 0.61
SMG5-204ENST00000476954 MYOGP15173 224 aa18.89■□□□□ 0.61
SMG5-204ENST00000476954 MCAMP43121 646 aa18.89■□□□□ 0.61
SMG5-204ENST00000476954 RABGGTBP53611 331 aa18.89■□□□□ 0.61
SMG5-204ENST00000476954 PPP4CP60510 307 aa18.89■□□□□ 0.61
SMG5-204ENST00000476954 IRX5P78411 483 aaPredicted RBP18.89■□□□□ 0.61
SMG5-204ENST00000476954 NAA16Q6N069 864 aaPredicted RBP18.89■□□□□ 0.61
SMG5-204ENST00000476954 NCAPG2Q86XI2 1143 aa18.89■□□□□ 0.61
SMG5-204ENST00000476954 SHCBP1Q8NEM2 672 aa18.89■□□□□ 0.61
SMG5-204ENST00000476954 CDCA7LQ96GN5 454 aa18.89■□□□□ 0.61
SMG5-204ENST00000476954 PTPRCP08575 1304 aa18.89■□□□□ 0.61
SMG5-204ENST00000476954 XIRP2A4UGR9 3374 aa18.89■□□□□ 0.61
SMG5-204ENST00000476954 RFXAPO00287 272 aa18.88■□□□□ 0.61
SMG5-204ENST00000476954 ERC2O15083 957 aa18.88■□□□□ 0.61
SMG5-204ENST00000476954 GPR37L1O60883 481 aa18.88■□□□□ 0.61
SMG5-204ENST00000476954 BAG3O95817 575 aa18.88■□□□□ 0.61
SMG5-204ENST00000476954 HLA-DOAP06340 250 aa18.88■□□□□ 0.61
SMG5-204ENST00000476954 DYNLL1P63167 89 aaKnown RBP18.88■□□□□ 0.61
SMG5-204ENST00000476954 PLS1Q14651 629 aa18.88■□□□□ 0.61
SMG5-204ENST00000476954 AAK1Q2M2I8 961 aa18.88■□□□□ 0.61
SMG5-204ENST00000476954 TATDN1Q6P1N9 297 aa18.88■□□□□ 0.61
SMG5-204ENST00000476954 SNRKQ9NRH2 765 aa18.88■□□□□ 0.61
SMG5-204ENST00000476954 TRANK1O15050 2925 aa18.88■□□□□ 0.61
SMG5-204ENST00000476954 MYADML2A6NDP7 307 aa18.87■□□□□ 0.61
SMG5-204ENST00000476954 PGK2P07205 417 aa18.87■□□□□ 0.61
SMG5-204ENST00000476954 ZNF865P0CJ78 1059 aaPredicted RBP18.87■□□□□ 0.61
SMG5-204ENST00000476954 ARID4AP29374 1257 aaPredicted RBP18.87■□□□□ 0.61
SMG5-204ENST00000476954 GUCY1A2P33402 732 aa18.87■□□□□ 0.61
SMG5-204ENST00000476954 COG2Q14746 738 aa18.87■□□□□ 0.61
SMG5-204ENST00000476954 PSRC1Q6PGN9 363 aaPredicted RBP18.87■□□□□ 0.61
SMG5-204ENST00000476954 SLC5A4Q9NY91 659 aa18.87■□□□□ 0.61
SMG5-204ENST00000476954 BRWD1Q9NSI6 2320 aa18.86■□□□□ 0.61
SMG5-204ENST00000476954 COL11A1P12107 1806 aaPredicted RBP18.86■□□□□ 0.61
SMG5-204ENST00000476954 SYNRGQ9UMZ2 1314 aa18.86■□□□□ 0.61
SMG5-204ENST00000476954 APBB1O00213 710 aa18.86■□□□□ 0.61
SMG5-204ENST00000476954 TLL1O43897 1013 aa18.86■□□□□ 0.61
SMG5-204ENST00000476954 PLCG2P16885 1265 aa18.86■□□□□ 0.61
SMG5-204ENST00000476954 CYP2C18P33260 490 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms