RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 IPO8O15397 1037 aaKnown RBP14.59□□□□□ -0.07
HDAC6-219ENST00000476625 ADORA2AP29274 412 aa14.59□□□□□ -0.07
HDAC6-219ENST00000476625 TRIM60Q495X7 471 aa14.59□□□□□ -0.07
HDAC6-219ENST00000476625 ZKSCAN2Q63HK3 967 aa14.59□□□□□ -0.07
HDAC6-219ENST00000476625 GTF3C2Q8WUA4 911 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-219ENST00000476625 LPAR1Q92633 364 aa14.59□□□□□ -0.07
HDAC6-219ENST00000476625 BADQ92934 168 aa14.59□□□□□ -0.07
HDAC6-219ENST00000476625 LENG1Q96BZ8 264 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-219ENST00000476625 DYNLL2Q96FJ2 89 aa14.59□□□□□ -0.07
HDAC6-219ENST00000476625 LBHD1Q9BQE6 289 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-219ENST00000476625 TANGO6Q9C0B7 1094 aa14.59□□□□□ -0.07
HDAC6-219ENST00000476625 IL1RAPL2Q9NP60 686 aa14.59□□□□□ -0.07
HDAC6-219ENST00000476625 CYP2D7A0A087X1C5 515 aa14.58□□□□□ -0.08
HDAC6-219ENST00000476625 DNM1LO00429 736 aa14.58□□□□□ -0.08
HDAC6-219ENST00000476625 HOXC6P09630 235 aa14.58□□□□□ -0.08
HDAC6-219ENST00000476625 ERCC3P19447 782 aa14.58□□□□□ -0.08
HDAC6-219ENST00000476625 ITGB8P26012 769 aa14.58□□□□□ -0.08
HDAC6-219ENST00000476625 CCNA1P78396 465 aa14.58□□□□□ -0.08
HDAC6-219ENST00000476625 GABPAQ06546 454 aa14.58□□□□□ -0.08
HDAC6-219ENST00000476625 LBX2Q6XYB7 198 aa14.58□□□□□ -0.08
HDAC6-219ENST00000476625 SLC39A5Q6ZMH5 540 aa14.58□□□□□ -0.08
HDAC6-219ENST00000476625 AACSQ86V21 672 aa14.58□□□□□ -0.08
HDAC6-219ENST00000476625 ITPRIPQ8IWB1 547 aa14.58□□□□□ -0.08
HDAC6-219ENST00000476625 SPICE1Q8N0Z3 855 aa14.58□□□□□ -0.08
HDAC6-219ENST00000476625 LCORLQ8N3X6 602 aa14.58□□□□□ -0.08
HDAC6-219ENST00000476625 NOP58Q9Y2X3 529 aaKnown RBP14.58□□□□□ -0.08
HDAC6-219ENST00000476625 IVNS1ABPQ9Y6Y0 642 aa14.58□□□□□ -0.08
HDAC6-219ENST00000476625 MYH7P12883 1935 aa14.58□□□□□ -0.08
HDAC6-219ENST00000476625 TRIM43BA6NCK2 446 aa14.57□□□□□ -0.08
HDAC6-219ENST00000476625 APBB1O00213 710 aa14.57□□□□□ -0.08
HDAC6-219ENST00000476625 GLRX3O76003 335 aaKnown RBP14.57□□□□□ -0.08
HDAC6-219ENST00000476625 POLR3DP05423 398 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-219ENST00000476625 ADCYAP1R1P41586 468 aa14.57□□□□□ -0.08
HDAC6-219ENST00000476625 USP14P54578 494 aa14.57□□□□□ -0.08
HDAC6-219ENST00000476625 PLS1Q14651 629 aa14.57□□□□□ -0.08
HDAC6-219ENST00000476625 FAM47AQ5JRC9 791 aa14.57□□□□□ -0.08
HDAC6-219ENST00000476625 DPP9Q86TI2 863 aa14.57□□□□□ -0.08
HDAC6-219ENST00000476625 SIAH1Q8IUQ4 282 aa14.57□□□□□ -0.08
HDAC6-219ENST00000476625 MYLIPQ8WY64 445 aa14.57□□□□□ -0.08
HDAC6-219ENST00000476625 TRIM43Q96BQ3 446 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-219ENST00000476625 ATG4CQ96DT6 458 aa14.57□□□□□ -0.08
HDAC6-219ENST00000476625 CDX2Q99626 313 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-219ENST00000476625 SPATC1LQ9H0A9 340 aa14.57□□□□□ -0.08
HDAC6-219ENST00000476625 TTYH1Q9H313 450 aaPredicted RBP14.57□□□□□ -0.08
HDAC6-219ENST00000476625 LAMA2P24043 3122 aaKnown RBP14.56□□□□□ -0.08
HDAC6-219ENST00000476625 MAGEB6P1A0A0J9YX57 407 aa14.56□□□□□ -0.08
HDAC6-219ENST00000476625 PRKAB2O43741 272 aa14.56□□□□□ -0.08
HDAC6-219ENST00000476625 AKR1B1P15121 316 aa14.56□□□□□ -0.08
HDAC6-219ENST00000476625 PDE6AP16499 860 aa14.56□□□□□ -0.08
HDAC6-219ENST00000476625 EPHB4P54760 987 aa14.56□□□□□ -0.08
HDAC6-219ENST00000476625 ZNF697Q5TEC3 545 aa14.56□□□□□ -0.08
HDAC6-219ENST00000476625 CEP85Q6P2H3 762 aa14.56□□□□□ -0.08
HDAC6-219ENST00000476625 TTC6Q86TZ1 520 aa14.56□□□□□ -0.08
HDAC6-219ENST00000476625 CABP5Q9NP86 173 aa14.56□□□□□ -0.08
HDAC6-219ENST00000476625 PDLIM7Q9NR12 457 aa14.56□□□□□ -0.08
HDAC6-219ENST00000476625 MCM9Q9NXL9 1143 aa14.56□□□□□ -0.08
HDAC6-219ENST00000476625 TAL1P17542 331 aaPredicted RBP14.55□□□□□ -0.08
HDAC6-219ENST00000476625 MAP3K12Q12852 859 aa14.55□□□□□ -0.08
HDAC6-219ENST00000476625 NCAPG2Q86XI2 1143 aa14.55□□□□□ -0.08
HDAC6-219ENST00000476625 ARMT1Q9H993 441 aa14.55□□□□□ -0.08
HDAC6-219ENST00000476625 FBXO28Q9NVF7 368 aa14.55□□□□□ -0.08
HDAC6-219ENST00000476625 ZNF532Q9HCE3 1301 aa14.55□□□□□ -0.08
HDAC6-219ENST00000476625 TCRBV5S4A2TA0A5A2 114 aa14.54□□□□□ -0.08
HDAC6-219ENST00000476625 PGK2P07205 417 aa14.54□□□□□ -0.08
HDAC6-219ENST00000476625 IRX5P78411 483 aaPredicted RBP14.54□□□□□ -0.08
HDAC6-219ENST00000476625 COG2Q14746 738 aa14.54□□□□□ -0.08
HDAC6-219ENST00000476625 LRRC41Q15345 812 aa14.54□□□□□ -0.08
HDAC6-219ENST00000476625 SLC9C2Q5TAH2 1124 aa14.54□□□□□ -0.08
HDAC6-219ENST00000476625 FAM109BQ6ICB4 259 aaPredicted RBP14.54□□□□□ -0.08
HDAC6-219ENST00000476625 DNAJC2Q99543 621 aaKnown RBP14.54□□□□□ -0.08
HDAC6-219ENST00000476625 SEMA6BQ9H3T3 888 aa14.54□□□□□ -0.08
HDAC6-219ENST00000476625 PRKAG2Q9UGJ0 569 aa14.54□□□□□ -0.08
HDAC6-219ENST00000476625 GREB1LQ9C091 1923 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-219ENST00000476625 KBTBD13C9JR72 458 aa14.53□□□□□ -0.08
HDAC6-219ENST00000476625 GOLIM4O00461 696 aa14.53□□□□□ -0.08
HDAC6-219ENST00000476625 TMEM132BQ14DG7 1078 aa14.53□□□□□ -0.08
HDAC6-219ENST00000476625 SNX17Q15036 470 aa14.53□□□□□ -0.08
HDAC6-219ENST00000476625 OLFML2BQ68BL8 750 aa14.53□□□□□ -0.08
HDAC6-219ENST00000476625 FTSJ3Q8IY81 847 aaKnown RBP14.53□□□□□ -0.08
HDAC6-219ENST00000476625 PANK1Q8TE04 598 aa14.53□□□□□ -0.08
HDAC6-219ENST00000476625 MAML3Q96JK9 1138 aa14.53□□□□□ -0.08
HDAC6-219ENST00000476625 DCP1AQ9NPI6 582 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-219ENST00000476625 A0A0C4DFX4 3053 aa14.53□□□□□ -0.08
HDAC6-219ENST00000476625 MCM3APO60318 1980 aa14.53□□□□□ -0.08
HDAC6-219ENST00000476625 GBF1Q92538 1859 aa14.52□□□□□ -0.08
HDAC6-219ENST00000476625 SEPT4O43236 478 aa14.52□□□□□ -0.09
HDAC6-219ENST00000476625 MSCO60682 206 aa14.52□□□□□ -0.09
HDAC6-219ENST00000476625 FLOT1O75955 427 aa14.52□□□□□ -0.09
HDAC6-219ENST00000476625 PGK1P00558 417 aa14.52□□□□□ -0.09
HDAC6-219ENST00000476625 DSG3P32926 999 aa14.52□□□□□ -0.09
HDAC6-219ENST00000476625 TLE2Q04725 743 aa14.52□□□□□ -0.09
HDAC6-219ENST00000476625 MAFAQ8NHW3 353 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-219ENST00000476625 CDH23Q9H251 3354 aa14.51□□□□□ -0.09
HDAC6-219ENST00000476625 MBD4O95243 580 aa14.51□□□□□ -0.09
HDAC6-219ENST00000476625 USP38Q8NB14 1042 aa14.51□□□□□ -0.09
HDAC6-219ENST00000476625 ARRDC4Q8NCT1 418 aa14.51□□□□□ -0.09
HDAC6-219ENST00000476625 RHPN1Q8TCX5 695 aa14.51□□□□□ -0.09
HDAC6-219ENST00000476625 CRNKL1Q9BZJ0 848 aaKnown RBP14.51□□□□□ -0.09
HDAC6-219ENST00000476625 MYH4Q9Y623 1939 aa14.51□□□□□ -0.09
HDAC6-219ENST00000476625 SPTBN5Q9NRC6 3674 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms