RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 SH3TC2Q8TF17 1288 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 RILPL2Q969X0 211 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 NUDT12Q9BQG2 462 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 RPAP3Q9H6T3 665 aaPredicted RBP12.17□□□□□ -0.46
CCM2-208ENST00000476594 TMX2Q9Y320 296 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 IVNS1ABPQ9Y6Y0 642 aa12.17□□□□□ -0.46
CCM2-208ENST00000476594 HTTP42858 3142 aa12.16□□□□□ -0.46
CCM2-208ENST00000476594 CTGFP29279 349 aa12.16□□□□□ -0.46
CCM2-208ENST00000476594 CAP1Q01518 475 aa12.16□□□□□ -0.46
CCM2-208ENST00000476594 COG2Q14746 738 aa12.16□□□□□ -0.46
CCM2-208ENST00000476594 OSBPL3Q9H4L5 887 aa12.16□□□□□ -0.46
CCM2-208ENST00000476594 VCPKMTQ9H867 229 aa12.16□□□□□ -0.46
CCM2-208ENST00000476594 RBBP6Q7Z6E9 1792 aaKnown RBP12.15□□□□□ -0.46
CCM2-208ENST00000476594 RAD21O60216 631 aa12.15□□□□□ -0.46
CCM2-208ENST00000476594 TSPY3P0CV98 308 aa12.15□□□□□ -0.46
CCM2-208ENST00000476594 TSPY8P0CW00 308 aa12.15□□□□□ -0.46
CCM2-208ENST00000476594 MCMDC2Q4G0Z9 681 aa12.15□□□□□ -0.46
CCM2-208ENST00000476594 EPB41L4AQ9HCS5 686 aaPredicted RBP12.15□□□□□ -0.46
CCM2-208ENST00000476594 SYNPO2Q9UMS6 1093 aa12.15□□□□□ -0.46
CCM2-208ENST00000476594 KIAA0100Q14667 2235 aaKnown RBP12.15□□□□□ -0.46
CCM2-208ENST00000476594 ZSWIM8A7E2V4 1837 aa12.14□□□□□ -0.47
CCM2-208ENST00000476594 A0A1W2PRG0 241 aa12.14□□□□□ -0.47
CCM2-208ENST00000476594 FLOT1O75955 427 aa12.14□□□□□ -0.47
CCM2-208ENST00000476594 IGHDP01880 384 aa12.14□□□□□ -0.47
CCM2-208ENST00000476594 HMGCRP04035 888 aa12.14□□□□□ -0.47
CCM2-208ENST00000476594 EEF2P13639 858 aaKnown RBP12.14□□□□□ -0.47
CCM2-208ENST00000476594 RASA1P20936 1047 aa12.14□□□□□ -0.47
CCM2-208ENST00000476594 RGS2P41220 211 aa12.14□□□□□ -0.47
CCM2-208ENST00000476594 EVX2Q03828 476 aa12.14□□□□□ -0.47
CCM2-208ENST00000476594 PPARAQ07869 468 aa12.14□□□□□ -0.47
CCM2-208ENST00000476594 WDR78Q5VTH9 848 aa12.14□□□□□ -0.47
CCM2-208ENST00000476594 PLEKHH3Q7Z736 793 aa12.14□□□□□ -0.47
CCM2-208ENST00000476594 SEC62Q99442 399 aaKnown RBP12.14□□□□□ -0.47
CCM2-208ENST00000476594 RNF208Q9H0X6 261 aa12.14□□□□□ -0.47
CCM2-208ENST00000476594 DIAPH3Q9NSV4 1193 aa12.14□□□□□ -0.47
CCM2-208ENST00000476594 NYAP2Q9P242 653 aa12.14□□□□□ -0.47
CCM2-208ENST00000476594 RBPJLQ9UBG7 517 aa12.14□□□□□ -0.47
CCM2-208ENST00000476594 GABRQQ9UN88 632 aa12.14□□□□□ -0.47
CCM2-208ENST00000476594 POTEFA5A3E0 1075 aa12.13□□□□□ -0.47
CCM2-208ENST00000476594 SPDYE16A6NNV3 312 aaPredicted RBP12.13□□□□□ -0.47
CCM2-208ENST00000476594 MYCP01106 439 aaPredicted RBP12.13□□□□□ -0.47
CCM2-208ENST00000476594 INHAP05111 366 aa12.13□□□□□ -0.47
CCM2-208ENST00000476594 GJB1P08034 283 aa12.13□□□□□ -0.47
CCM2-208ENST00000476594 XRCC5P13010 732 aaKnown RBP12.13□□□□□ -0.47
CCM2-208ENST00000476594 COPB2P35606 906 aa12.13□□□□□ -0.47
CCM2-208ENST00000476594 GPR142Q7Z601 462 aa12.13□□□□□ -0.47
CCM2-208ENST00000476594 PLEKHM2Q8IWE5 1019 aa12.13□□□□□ -0.47
CCM2-208ENST00000476594 STK11IPQ8N1F8 1099 aa12.13□□□□□ -0.47
CCM2-208ENST00000476594 SLC5A4Q9NY91 659 aa12.13□□□□□ -0.47
CCM2-208ENST00000476594 CTDP1Q9Y5B0 961 aaPredicted RBP12.13□□□□□ -0.47
CCM2-208ENST00000476594 ZMYM6O95789 1325 aa12.12□□□□□ -0.47
CCM2-208ENST00000476594 CCDC171Q6TFL3 1326 aa12.12□□□□□ -0.47
CCM2-208ENST00000476594 TSPY2A6NKD2 308 aa12.12□□□□□ -0.47
CCM2-208ENST00000476594 STRNO43815 780 aa12.12□□□□□ -0.47
CCM2-208ENST00000476594 TTLL1O95922 423 aa12.12□□□□□ -0.47
CCM2-208ENST00000476594 PCP11498 1178 aaKnown RBP12.12□□□□□ -0.47
CCM2-208ENST00000476594 CCL5P13501 91 aa12.12□□□□□ -0.47
CCM2-208ENST00000476594 ELNP15502 786 aa12.12□□□□□ -0.47
CCM2-208ENST00000476594 ZKSCAN1P17029 563 aaPredicted RBP12.12□□□□□ -0.47
CCM2-208ENST00000476594 DSG3P32926 999 aa12.12□□□□□ -0.47
CCM2-208ENST00000476594 NT5C2P49902 561 aa12.12□□□□□ -0.47
CCM2-208ENST00000476594 ALX1Q15699 326 aa12.12□□□□□ -0.47
CCM2-208ENST00000476594 SPICE1Q8N0Z3 855 aa12.12□□□□□ -0.47
CCM2-208ENST00000476594 SHCBP1Q8NEM2 672 aa12.12□□□□□ -0.47
CCM2-208ENST00000476594 APBA2Q99767 749 aa12.12□□□□□ -0.47
CCM2-208ENST00000476594 TXNRD2Q9NNW7 524 aa12.12□□□□□ -0.47
CCM2-208ENST00000476594 PLIN4Q96Q06 1357 aa12.12□□□□□ -0.47
CCM2-208ENST00000476594 CENPFP49454 3210 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 SLC15A5A6NIM6 579 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 PRDM1O75626 825 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 SLC25A27O95847 323 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 EN2P19622 333 aaPredicted RBP12.11□□□□□ -0.47
CCM2-208ENST00000476594 SDSP20132 328 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 CYP2B6P20813 491 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 GJA8P48165 433 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 PLS1Q14651 629 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 MTFR1Q15390 333 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 CCDC129Q6ZRS4 1044 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 CLEC10AQ8IUN9 316 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 NEDD1Q8NHV4 660 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 SPATC1LQ9H0A9 340 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 PORCNQ9H237 461 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 RNF41Q9H4P4 317 aaPredicted RBP12.11□□□□□ -0.47
CCM2-208ENST00000476594 MROH8Q9H579 483 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 HMX1Q9NP08 348 aaPredicted RBP12.11□□□□□ -0.47
CCM2-208ENST00000476594 TOMM22Q9NS69 142 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 CLIP2Q9UDT6 1046 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 ANAPC4Q9UJX5 808 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 PDE4DIPQ5VU43 2346 aa12.11□□□□□ -0.47
CCM2-208ENST00000476594 A0A0D9SFI3 127 aa12.1□□□□□ -0.47
CCM2-208ENST00000476594 FDX1P10109 184 aa12.1□□□□□ -0.47
CCM2-208ENST00000476594 IRX6P78412 446 aaPredicted RBP12.1□□□□□ -0.47
CCM2-208ENST00000476594 TFAP4Q01664 338 aa12.1□□□□□ -0.47
CCM2-208ENST00000476594 MAP2K5Q13163 448 aa12.1□□□□□ -0.47
CCM2-208ENST00000476594 NMIQ13287 307 aaPredicted RBP12.1□□□□□ -0.47
CCM2-208ENST00000476594 Q3C1V9 767 aa12.1□□□□□ -0.47
CCM2-208ENST00000476594 SAMD1Q6SPF0 538 aaPredicted RBP12.1□□□□□ -0.47
CCM2-208ENST00000476594 RUFY2Q8WXA3 655 aa12.1□□□□□ -0.47
CCM2-208ENST00000476594 FAM227BQ96M60 508 aa12.1□□□□□ -0.47
CCM2-208ENST00000476594 MTMR4Q9NYA4 1195 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms