RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 PRRT2Q7Z6L0 340 aaPredicted RBP8.85□□□□□ -0.99
NUP58-209ENST00000476553 GGNQ86UU5 652 aa8.85□□□□□ -0.99
NUP58-209ENST00000476553 DTWD2Q8NBA8 298 aa8.85□□□□□ -0.99
NUP58-209ENST00000476553 PCDHA11Q9Y5I1 949 aa8.85□□□□□ -0.99
NUP58-209ENST00000476553 RETREG2Q8NC44 543 aa8.84□□□□□ -0.99
NUP58-209ENST00000476553 TMEM87BQ96K49 555 aa8.84□□□□□ -0.99
NUP58-209ENST00000476553 PI3P19957 117 aa8.83□□□□□ -1
NUP58-209ENST00000476553 LTKP29376 864 aa8.83□□□□□ -1
NUP58-209ENST00000476553 PDE6BP35913 854 aa8.83□□□□□ -1
NUP58-209ENST00000476553 CHRNEQ04844 493 aa8.83□□□□□ -1
NUP58-209ENST00000476553 SLC6A19Q695T7 634 aa8.83□□□□□ -1
NUP58-209ENST00000476553 TMEM132EQ6IEE7 984 aa8.83□□□□□ -1
NUP58-209ENST00000476553 SV2BQ7L1I2 683 aa8.83□□□□□ -1
NUP58-209ENST00000476553 OTOL1A6NHN0 477 aaPredicted RBP8.82□□□□□ -1
NUP58-209ENST00000476553 TTBK2Q6IQ55 1244 aa8.82□□□□□ -1
NUP58-209ENST00000476553 PPP1R13LQ8WUF5 828 aa8.82□□□□□ -1
NUP58-209ENST00000476553 DACT3Q96B18 629 aaPredicted RBP8.82□□□□□ -1
NUP58-209ENST00000476553 SIGLEC10Q96LC7 697 aa8.82□□□□□ -1
NUP58-209ENST00000476553 SETDB2Q96T68 719 aa8.82□□□□□ -1
NUP58-209ENST00000476553 EBF1Q9UH73 591 aa8.82□□□□□ -1
NUP58-209ENST00000476553 MBD1Q9UIS9 605 aaPredicted RBP8.82□□□□□ -1
NUP58-209ENST00000476553 GPR160Q9UJ42 338 aa8.82□□□□□ -1
NUP58-209ENST00000476553 HRKO00198 91 aa8.81□□□□□ -1
NUP58-209ENST00000476553 SASH1O94885 1247 aa8.81□□□□□ -1
NUP58-209ENST00000476553 PGRP06401 933 aa8.81□□□□□ -1
NUP58-209ENST00000476553 USP17L7P0C7H9 530 aa8.81□□□□□ -1
NUP58-209ENST00000476553 FMR1Q06787 632 aaKnown RBP eCLIP8.81□□□□□ -1
NUP58-209ENST00000476553 ANKS4BQ8N8V4 417 aa8.81□□□□□ -1
NUP58-209ENST00000476553 C12orf49Q9H741 205 aa8.81□□□□□ -1
NUP58-209ENST00000476553 FAM8A1Q9UBU6 413 aa8.81□□□□□ -1
NUP58-209ENST00000476553 CEP131Q9UPN4 1083 aa8.81□□□□□ -1
NUP58-209ENST00000476553 ADRB1P08588 477 aa8.8□□□□□ -1
NUP58-209ENST00000476553 CELA3BP08861 270 aa8.8□□□□□ -1
NUP58-209ENST00000476553 RPS26P62854 115 aaKnown RBP8.8□□□□□ -1
NUP58-209ENST00000476553 TEKQ02763 1124 aa8.8□□□□□ -1
NUP58-209ENST00000476553 SPPL2CQ8IUH8 684 aa8.8□□□□□ -1
NUP58-209ENST00000476553 MCATQ8IVS2 390 aaKnown RBP8.8□□□□□ -1
NUP58-209ENST00000476553 PANK1Q8TE04 598 aa8.8□□□□□ -1
NUP58-209ENST00000476553 BORCS6Q96GS4 357 aa8.8□□□□□ -1
NUP58-209ENST00000476553 SLC22A31A6NKX4 558 aa8.79□□□□□ -1
NUP58-209ENST00000476553 PSPNO60542 156 aa8.79□□□□□ -1
NUP58-209ENST00000476553 DUSP4Q13115 394 aa8.79□□□□□ -1
NUP58-209ENST00000476553 SEPT6Q14141 434 aa8.79□□□□□ -1
NUP58-209ENST00000476553 LINC01599Q8WXQ3 324 aa8.79□□□□□ -1
NUP58-209ENST00000476553 ZNF281Q9Y2X9 895 aa8.79□□□□□ -1
NUP58-209ENST00000476553 IRAK3Q9Y616 596 aa8.79□□□□□ -1
NUP58-209ENST00000476553 OR14I1A6ND48 311 aa8.78□□□□□ -1
NUP58-209ENST00000476553 NOTOA8MTQ0 251 aa8.78□□□□□ -1
NUP58-209ENST00000476553 EFEMP2O95967 443 aa8.78□□□□□ -1
NUP58-209ENST00000476553 AFF3P51826 1226 aaKnown RBP8.78□□□□□ -1
NUP58-209ENST00000476553 ACSF2Q96CM8 615 aaPredicted RBP8.78□□□□□ -1
NUP58-209ENST00000476553 G6PC3Q9BUM1 346 aa8.78□□□□□ -1
NUP58-209ENST00000476553 ADAM30Q9UKF2 790 aa8.78□□□□□ -1
NUP58-209ENST00000476553 KCNH3Q9ULD8 1083 aa8.78□□□□□ -1
NUP58-209ENST00000476553 PATL2C9JE40 543 aaKnown RBP8.77□□□□□ -1.01
NUP58-209ENST00000476553 GALK1P51570 392 aa8.77□□□□□ -1.01
NUP58-209ENST00000476553 ALG1LQ6GMV1 187 aa8.77□□□□□ -1.01
NUP58-209ENST00000476553 NLRX1Q86UT6 975 aa8.77□□□□□ -1.01
NUP58-209ENST00000476553 CYB5D2Q8WUJ1 264 aa8.77□□□□□ -1.01
NUP58-209ENST00000476553 EPB41L4AQ9HCS5 686 aaPredicted RBP8.77□□□□□ -1.01
NUP58-209ENST00000476553 TTF2Q9UNY4 1162 aaKnown RBP8.77□□□□□ -1.01
NUP58-209ENST00000476553 SPG7Q9UQ90 795 aa8.77□□□□□ -1.01
NUP58-209ENST00000476553 PCDHB5Q9Y5E4 795 aa8.77□□□□□ -1.01
NUP58-209ENST00000476553 MAPK1P28482 360 aa8.76□□□□□ -1.01
NUP58-209ENST00000476553 MAPK8P45983 427 aa8.76□□□□□ -1.01
NUP58-209ENST00000476553 EPHB3P54753 998 aa8.76□□□□□ -1.01
NUP58-209ENST00000476553 FEZF2Q8TBJ5 459 aa8.76□□□□□ -1.01
NUP58-209ENST00000476553 RNF141Q8WVD5 230 aa8.76□□□□□ -1.01
NUP58-209ENST00000476553 SYTL4Q96C24 671 aaPredicted RBP8.76□□□□□ -1.01
NUP58-209ENST00000476553 USP35Q9P2H5 1018 aa8.76□□□□□ -1.01
NUP58-209ENST00000476553 RBM47A0AV96 593 aaKnown RBP8.75□□□□□ -1.01
NUP58-209ENST00000476553 PDE4BQ07343 736 aa8.75□□□□□ -1.01
NUP58-209ENST00000476553 ERICH6BQ5W0A0 696 aa8.75□□□□□ -1.01
NUP58-209ENST00000476553 SP8Q8IXZ3 490 aa8.75□□□□□ -1.01
NUP58-209ENST00000476553 CHMP4AQ9BY43 222 aa8.75□□□□□ -1.01
NUP58-209ENST00000476553 IRS4O14654 1257 aaPredicted RBP8.74□□□□□ -1.01
NUP58-209ENST00000476553 N4BP3O15049 544 aa8.74□□□□□ -1.01
NUP58-209ENST00000476553 PDE4CQ08493 712 aa8.74□□□□□ -1.01
NUP58-209ENST00000476553 ADGRF1Q5T601 910 aa8.74□□□□□ -1.01
NUP58-209ENST00000476553 TEPSINQ96N21 525 aa8.74□□□□□ -1.01
NUP58-209ENST00000476553 BIN2Q9UBW5 565 aaPredicted RBP8.74□□□□□ -1.01
NUP58-209ENST00000476553 WWC3Q9ULE0 1092 aa8.74□□□□□ -1.01
NUP58-209ENST00000476553 SRSF3P84103 164 aaKnown RBP8.73□□□□□ -1.01
NUP58-209ENST00000476553 EFEMP1Q12805 493 aa8.73□□□□□ -1.01
NUP58-209ENST00000476553 AGMOQ6ZNB7 445 aa8.73□□□□□ -1.01
NUP58-209ENST00000476553 LRRN2O75325 713 aa8.72□□□□□ -1.01
NUP58-209ENST00000476553 CNTD2Q9H8S5 307 aa8.72□□□□□ -1.01
NUP58-209ENST00000476553 SHISA3A0PJX4 238 aa8.71□□□□□ -1.02
NUP58-209ENST00000476553 TMPRSS5Q9H3S3 457 aa8.71□□□□□ -1.02
NUP58-209ENST00000476553 LUC7LQ9NQ29 371 aaKnown RBP8.71□□□□□ -1.02
NUP58-209ENST00000476553 VIPR1P32241 457 aa8.7□□□□□ -1.02
NUP58-209ENST00000476553 CRTAC1Q9NQ79 661 aa8.7□□□□□ -1.02
NUP58-209ENST00000476553 SIRT5Q9NXA8 310 aa8.7□□□□□ -1.02
NUP58-209ENST00000476553 ZC3H12DA2A288 527 aaKnown RBP8.69□□□□□ -1.02
NUP58-209ENST00000476553 USP2O75604 605 aaPredicted RBP8.69□□□□□ -1.02
NUP58-209ENST00000476553 LMNB1P20700 586 aa8.69□□□□□ -1.02
NUP58-209ENST00000476553 YBX1P67809 324 aaKnown RBP8.69□□□□□ -1.02
NUP58-209ENST00000476553 RPL6Q02878 288 aaKnown RBP8.69□□□□□ -1.02
NUP58-209ENST00000476553 SPATS1Q496A3 300 aa8.69□□□□□ -1.02
NUP58-209ENST00000476553 TMEFF1Q8IYR6 380 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms