RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 CERS3Q8IU89 383 aa20.07■□□□□ 0.8
APOBEC3F-203ENST00000476513 SHCBP1Q8NEM2 672 aa20.07■□□□□ 0.8
APOBEC3F-203ENST00000476513 SPATC1LQ9H0A9 340 aa20.07■□□□□ 0.8
APOBEC3F-203ENST00000476513 HOXC10Q9NYD6 342 aa20.07■□□□□ 0.8
APOBEC3F-203ENST00000476513 LAMA2P24043 3122 aaKnown RBP20.07■□□□□ 0.8
APOBEC3F-203ENST00000476513 TRIM27P14373 513 aa20.06■□□□□ 0.8
APOBEC3F-203ENST00000476513 ITGB8P26012 769 aa20.06■□□□□ 0.8
APOBEC3F-203ENST00000476513 PLCD1P51178 756 aa20.06■□□□□ 0.8
APOBEC3F-203ENST00000476513 TLE2Q04725 743 aa20.06■□□□□ 0.8
APOBEC3F-203ENST00000476513 OS9Q13438 667 aaPredicted RBP20.06■□□□□ 0.8
APOBEC3F-203ENST00000476513 POLA2Q14181 598 aa20.06■□□□□ 0.8
APOBEC3F-203ENST00000476513 SEPT2Q15019 361 aa20.06■□□□□ 0.8
APOBEC3F-203ENST00000476513 SYMPKQ92797 1274 aaKnown RBP20.06■□□□□ 0.8
APOBEC3F-203ENST00000476513 DBNLQ9UJU6 430 aaKnown RBP20.06■□□□□ 0.8
APOBEC3F-203ENST00000476513 ZNF236Q9UL36 1845 aa20.05■□□□□ 0.8
APOBEC3F-203ENST00000476513 TMEM265A0A087WTH1 108 aa20.05■□□□□ 0.8
APOBEC3F-203ENST00000476513 EPHB4P54760 987 aa20.05■□□□□ 0.8
APOBEC3F-203ENST00000476513 FAM47AQ5JRC9 791 aa20.05■□□□□ 0.8
APOBEC3F-203ENST00000476513 MAGEB6Q8N7X4 407 aa20.05■□□□□ 0.8
APOBEC3F-203ENST00000476513 TLR7Q9NYK1 1049 aaKnown RBP20.05■□□□□ 0.8
APOBEC3F-203ENST00000476513 DNAH12Q6ZR08 3092 aa20.05■□□□□ 0.8
APOBEC3F-203ENST00000476513 MYO5AQ9Y4I1 1855 aaKnown RBP20.05■□□□□ 0.8
APOBEC3F-203ENST00000476513 MYH1P12882 1939 aa20.04■□□□□ 0.8
APOBEC3F-203ENST00000476513 A0A1W2PRG0 241 aa20.04■□□□□ 0.8
APOBEC3F-203ENST00000476513 RNPC3Q96LT9 517 aaKnown RBP20.04■□□□□ 0.8
APOBEC3F-203ENST00000476513 TANGO6Q9C0B7 1094 aa20.04■□□□□ 0.8
APOBEC3F-203ENST00000476513 SLC5A4Q9NY91 659 aa20.04■□□□□ 0.8
APOBEC3F-203ENST00000476513 PHF24Q9UPV7 400 aa20.04■□□□□ 0.8
APOBEC3F-203ENST00000476513 TACC3Q9Y6A5 838 aa20.04■□□□□ 0.8
APOBEC3F-203ENST00000476513 CDH23Q9H251 3354 aa20.03■□□□□ 0.8
APOBEC3F-203ENST00000476513 EYSQ5T1H1 3165 aa20.03■□□□□ 0.8
APOBEC3F-203ENST00000476513 IPO8O15397 1037 aaKnown RBP20.03■□□□□ 0.8
APOBEC3F-203ENST00000476513 GABPAQ06546 454 aa20.03■□□□□ 0.8
APOBEC3F-203ENST00000476513 SSH3Q8TE77 659 aa20.03■□□□□ 0.8
APOBEC3F-203ENST00000476513 SURF6O75683 361 aaKnown RBP20.02■□□□□ 0.8
APOBEC3F-203ENST00000476513 KIAA1755Q5JYT7 1200 aa20.02■□□□□ 0.8
APOBEC3F-203ENST00000476513 NCAPG2Q86XI2 1143 aa20.02■□□□□ 0.8
APOBEC3F-203ENST00000476513 ABRAQ8N0Z2 381 aa20.02■□□□□ 0.8
APOBEC3F-203ENST00000476513 MB21D1Q8N884 522 aa20.02■□□□□ 0.8
APOBEC3F-203ENST00000476513 CLUAP1Q96AJ1 413 aa20.02■□□□□ 0.8
APOBEC3F-203ENST00000476513 MAML3Q96JK9 1138 aa20.02■□□□□ 0.8
APOBEC3F-203ENST00000476513 CCDC8Q9H0W5 538 aaPredicted RBP20.02■□□□□ 0.8
APOBEC3F-203ENST00000476513 MROH8Q9H579 483 aa20.02■□□□□ 0.8
APOBEC3F-203ENST00000476513 ANTXR1Q9H6X2 564 aa20.02■□□□□ 0.8
APOBEC3F-203ENST00000476513 POLR3DP05423 398 aaPredicted RBP20.01■□□□□ 0.79
APOBEC3F-203ENST00000476513 CLTBP09497 229 aa20.01■□□□□ 0.79
APOBEC3F-203ENST00000476513 DSG3P32926 999 aa20.01■□□□□ 0.79
APOBEC3F-203ENST00000476513 ATP8B2P98198 1209 aa20.01■□□□□ 0.79
APOBEC3F-203ENST00000476513 EVX2Q03828 476 aa20.01■□□□□ 0.79
APOBEC3F-203ENST00000476513 PLS1Q14651 629 aa20.01■□□□□ 0.79
APOBEC3F-203ENST00000476513 GRIN2CQ14957 1233 aa20.01■□□□□ 0.79
APOBEC3F-203ENST00000476513 USP38Q8NB14 1042 aa20.01■□□□□ 0.79
APOBEC3F-203ENST00000476513 RIOK1Q9BRS2 568 aaKnown RBP20.01■□□□□ 0.79
APOBEC3F-203ENST00000476513 XPNPEP3Q9NQH7 507 aa20.01■□□□□ 0.79
APOBEC3F-203ENST00000476513 MPHOSPH10O00566 681 aaKnown RBP20■□□□□ 0.79
APOBEC3F-203ENST00000476513 KIAA0355O15063 1070 aa20■□□□□ 0.79
APOBEC3F-203ENST00000476513 BCAR3O75815 825 aa20■□□□□ 0.79
APOBEC3F-203ENST00000476513 MAP3K12Q12852 859 aa20■□□□□ 0.79
APOBEC3F-203ENST00000476513 TJAP1Q5JTD0 557 aa20■□□□□ 0.79
APOBEC3F-203ENST00000476513 FRAT1Q92837 279 aaPredicted RBP20■□□□□ 0.79
APOBEC3F-203ENST00000476513 EAF2Q96CJ1 260 aaPredicted RBP20■□□□□ 0.79
APOBEC3F-203ENST00000476513 ATG4CQ96DT6 458 aa20■□□□□ 0.79
APOBEC3F-203ENST00000476513 RARBP10826 455 aa19.99■□□□□ 0.79
APOBEC3F-203ENST00000476513 FCER1AP12319 257 aa19.99■□□□□ 0.79
APOBEC3F-203ENST00000476513 RAG1P15918 1043 aa19.99■□□□□ 0.79
APOBEC3F-203ENST00000476513 TMED8Q6PL24 325 aaPredicted RBP19.99■□□□□ 0.79
APOBEC3F-203ENST00000476513 NRBP1Q9UHY1 535 aa19.99■□□□□ 0.79
APOBEC3F-203ENST00000476513 NOP58Q9Y2X3 529 aaKnown RBP19.99■□□□□ 0.79
APOBEC3F-203ENST00000476513 A0A0G2JMZ2 1700 aa19.99■□□□□ 0.79
APOBEC3F-203ENST00000476513 PQBP1O60828 265 aaKnown RBP19.98■□□□□ 0.79
APOBEC3F-203ENST00000476513 FLOT1O75955 427 aa19.98■□□□□ 0.79
APOBEC3F-203ENST00000476513 PGK1P00558 417 aa19.98■□□□□ 0.79
APOBEC3F-203ENST00000476513 DNAJB2P25686 324 aa19.98■□□□□ 0.79
APOBEC3F-203ENST00000476513 FPGSQ05932 587 aa19.98■□□□□ 0.79
APOBEC3F-203ENST00000476513 RNF180Q86T96 592 aa19.98■□□□□ 0.79
APOBEC3F-203ENST00000476513 MCM9Q9NXL9 1143 aa19.98■□□□□ 0.79
APOBEC3F-203ENST00000476513 PRUNE2Q8WUY3 3088 aa19.98■□□□□ 0.79
APOBEC3F-203ENST00000476513 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.97■□□□□ 0.79
APOBEC3F-203ENST00000476513 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.97■□□□□ 0.79
APOBEC3F-203ENST00000476513 A0A1W2PQ45 241 aaPredicted RBP19.97■□□□□ 0.79
APOBEC3F-203ENST00000476513 A0A1W2PQY0 241 aa19.97■□□□□ 0.79
APOBEC3F-203ENST00000476513 TNFRSF10AO00220 468 aa19.97■□□□□ 0.79
APOBEC3F-203ENST00000476513 TMEM57Q8N5G2 664 aa19.97■□□□□ 0.79
APOBEC3F-203ENST00000476513 TMEM39AQ9NV64 488 aa19.97■□□□□ 0.79
APOBEC3F-203ENST00000476513 MAGEB6P1A0A0J9YX57 407 aa19.96■□□□□ 0.79
APOBEC3F-203ENST00000476513 TAL1P17542 331 aaPredicted RBP19.96■□□□□ 0.79
APOBEC3F-203ENST00000476513 COL9A1P20849 921 aa19.96■□□□□ 0.79
APOBEC3F-203ENST00000476513 TMEM132BQ14DG7 1078 aa19.96■□□□□ 0.79
APOBEC3F-203ENST00000476513 TMEM179Q6ZVK1 233 aa19.96■□□□□ 0.79
APOBEC3F-203ENST00000476513 SIAH1Q8IUQ4 282 aa19.96■□□□□ 0.79
APOBEC3F-203ENST00000476513 SPICE1Q8N0Z3 855 aa19.96■□□□□ 0.79
APOBEC3F-203ENST00000476513 SLC44A5Q8NCS7 719 aa19.96■□□□□ 0.79
APOBEC3F-203ENST00000476513 ZNF576Q9H609 170 aa19.96■□□□□ 0.79
APOBEC3F-203ENST00000476513 C1orf115Q9H7X2 142 aa19.96■□□□□ 0.79
APOBEC3F-203ENST00000476513 SLC25A27O95847 323 aa19.95■□□□□ 0.78
APOBEC3F-203ENST00000476513 PGK2P07205 417 aa19.95■□□□□ 0.78
APOBEC3F-203ENST00000476513 FAAP100Q0VG06 881 aa19.95■□□□□ 0.78
APOBEC3F-203ENST00000476513 SAMD1Q6SPF0 538 aaPredicted RBP19.95■□□□□ 0.78
APOBEC3F-203ENST00000476513 CLEC10AQ8IUN9 316 aa19.95■□□□□ 0.78
APOBEC3F-203ENST00000476513 MMP19Q99542 508 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms