RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 IMMTQ16891 758 aaKnown RBP24.86■■□□□ 1.57
MAP1LC3A-204ENST00000476428 RRP12Q5JTH9 1297 aaKnown RBP24.86■■□□□ 1.57
MAP1LC3A-204ENST00000476428 MFSD6Q6ZSS7 791 aa24.86■■□□□ 1.57
MAP1LC3A-204ENST00000476428 ERO1AQ96HE7 468 aa24.86■■□□□ 1.57
MAP1LC3A-204ENST00000476428 CLIP2Q9UDT6 1046 aa24.86■■□□□ 1.57
MAP1LC3A-204ENST00000476428 PTPRFP10586 1907 aa24.86■■□□□ 1.57
MAP1LC3A-204ENST00000476428 PLIN4Q96Q06 1357 aa24.85■■□□□ 1.57
MAP1LC3A-204ENST00000476428 TSPY2A6NKD2 308 aa24.85■■□□□ 1.57
MAP1LC3A-204ENST00000476428 CAP1Q01518 475 aa24.85■■□□□ 1.57
MAP1LC3A-204ENST00000476428 CATSPERGQ6ZRH7 1159 aa24.85■■□□□ 1.57
MAP1LC3A-204ENST00000476428 CTU1Q7Z7A3 348 aaKnown RBP24.85■■□□□ 1.57
MAP1LC3A-204ENST00000476428 RNF41Q9H4P4 317 aaPredicted RBP24.85■■□□□ 1.57
MAP1LC3A-204ENST00000476428 RPAP3Q9H6T3 665 aaPredicted RBP24.85■■□□□ 1.57
MAP1LC3A-204ENST00000476428 CDC45O75419 566 aa24.84■■□□□ 1.57
MAP1LC3A-204ENST00000476428 PCP11498 1178 aaKnown RBP24.84■■□□□ 1.57
MAP1LC3A-204ENST00000476428 SOX10P56693 466 aa24.84■■□□□ 1.57
MAP1LC3A-204ENST00000476428 SPICE1Q8N0Z3 855 aa24.84■■□□□ 1.57
MAP1LC3A-204ENST00000476428 NKX2-3Q8TAU0 364 aa24.84■■□□□ 1.57
MAP1LC3A-204ENST00000476428 LPAR1Q92633 364 aa24.84■■□□□ 1.57
MAP1LC3A-204ENST00000476428 MKL1Q969V6 931 aa24.84■■□□□ 1.57
MAP1LC3A-204ENST00000476428 IL17RBQ9NRM6 502 aa24.84■■□□□ 1.57
MAP1LC3A-204ENST00000476428 LOC285556D6RIA3 1793 aa24.83■■□□□ 1.57
MAP1LC3A-204ENST00000476428 TTLL1O95922 423 aa24.83■■□□□ 1.57
MAP1LC3A-204ENST00000476428 GCLCP48506 637 aaPredicted RBP24.83■■□□□ 1.57
MAP1LC3A-204ENST00000476428 MAP4K1Q92918 833 aa24.83■■□□□ 1.57
MAP1LC3A-204ENST00000476428 U3KPZ7 1027 aaPredicted RBP24.83■■□□□ 1.57
MAP1LC3A-204ENST00000476428 NMT2O60551 498 aa24.82■■□□□ 1.56
MAP1LC3A-204ENST00000476428 HERVK_113P62684 666 aa24.82■■□□□ 1.56
MAP1LC3A-204ENST00000476428 LACTBP83111 547 aaPredicted RBP24.82■■□□□ 1.56
MAP1LC3A-204ENST00000476428 KIAA1211Q6ZU35 1233 aa24.82■■□□□ 1.56
MAP1LC3A-204ENST00000476428 ANKRD13CQ8N6S4 541 aa24.82■■□□□ 1.56
MAP1LC3A-204ENST00000476428 ARHGAP39Q9C0H5 1083 aa24.82■■□□□ 1.56
MAP1LC3A-204ENST00000476428 LSG1Q9H089 658 aaKnown RBP24.82■■□□□ 1.56
MAP1LC3A-204ENST00000476428 GOPCQ9HD26 462 aa24.82■■□□□ 1.56
MAP1LC3A-204ENST00000476428 NEDD4P46934 1319 aa24.82■■□□□ 1.56
MAP1LC3A-204ENST00000476428 F5H6K3 240 aa24.8■■□□□ 1.56
MAP1LC3A-204ENST00000476428 WDR46O15213 610 aaKnown RBP24.8■■□□□ 1.56
MAP1LC3A-204ENST00000476428 RAD21O60216 631 aa24.8■■□□□ 1.56
MAP1LC3A-204ENST00000476428 ECM2O94769 699 aaPredicted RBP24.8■■□□□ 1.56
MAP1LC3A-204ENST00000476428 CTGFP29279 349 aa24.8■■□□□ 1.56
MAP1LC3A-204ENST00000476428 KLRC3Q07444 240 aa24.8■■□□□ 1.56
MAP1LC3A-204ENST00000476428 KIF22Q14807 665 aa24.8■■□□□ 1.56
MAP1LC3A-204ENST00000476428 POTEEQ6S8J3 1075 aa24.8■■□□□ 1.56
MAP1LC3A-204ENST00000476428 CASC1Q6TDU7 716 aa24.8■■□□□ 1.56
MAP1LC3A-204ENST00000476428 OTOP1Q7RTM1 612 aa24.8■■□□□ 1.56
MAP1LC3A-204ENST00000476428 EFCC1Q9HA90 598 aa24.8■■□□□ 1.56
MAP1LC3A-204ENST00000476428 TCP11L1Q9NUJ3 509 aa24.8■■□□□ 1.56
MAP1LC3A-204ENST00000476428 TRIM17Q9Y577 477 aa24.8■■□□□ 1.56
MAP1LC3A-204ENST00000476428 MYH8P13535 1937 aa24.79■■□□□ 1.56
MAP1LC3A-204ENST00000476428 GREB1LQ9C091 1923 aaPredicted RBP24.79■■□□□ 1.56
MAP1LC3A-204ENST00000476428 PEX10O60683 326 aa24.79■■□□□ 1.56
MAP1LC3A-204ENST00000476428 CYP21A2P08686 494 aa24.79■■□□□ 1.56
MAP1LC3A-204ENST00000476428 FAM110CQ1W6H9 321 aa24.79■■□□□ 1.56
MAP1LC3A-204ENST00000476428 PPP4R3BQ5MIZ7 849 aa24.79■■□□□ 1.56
MAP1LC3A-204ENST00000476428 LRRC47Q8N1G4 583 aaKnown RBP24.79■■□□□ 1.56
MAP1LC3A-204ENST00000476428 ESR2Q92731 530 aa24.79■■□□□ 1.56
MAP1LC3A-204ENST00000476428 TANGO6Q9C0B7 1094 aa24.79■■□□□ 1.56
MAP1LC3A-204ENST00000476428 TXNRD2Q9NNW7 524 aa24.79■■□□□ 1.56
MAP1LC3A-204ENST00000476428 RBPJLQ9UBG7 517 aa24.79■■□□□ 1.56
MAP1LC3A-204ENST00000476428 SYNPO2Q9UMS6 1093 aa24.79■■□□□ 1.56
MAP1LC3A-204ENST00000476428 STX8Q9UNK0 236 aa24.79■■□□□ 1.56
MAP1LC3A-204ENST00000476428 RBM8AQ9Y5S9 174 aaKnown RBP24.79■■□□□ 1.56
MAP1LC3A-204ENST00000476428 NDUFB10O96000 172 aa24.78■■□□□ 1.56
MAP1LC3A-204ENST00000476428 PSMC4P43686 418 aa24.78■■□□□ 1.56
MAP1LC3A-204ENST00000476428 NOVP48745 357 aa24.78■■□□□ 1.56
MAP1LC3A-204ENST00000476428 COG2Q14746 738 aa24.78■■□□□ 1.56
MAP1LC3A-204ENST00000476428 ARHGEF6Q15052 776 aa24.78■■□□□ 1.56
MAP1LC3A-204ENST00000476428 MORF4L1Q9UBU8 362 aa24.78■■□□□ 1.56
MAP1LC3A-204ENST00000476428 B4E1Z4 1266 aa24.77■■□□□ 1.56
MAP1LC3A-204ENST00000476428 KDM4AO75164 1064 aa24.77■■□□□ 1.56
MAP1LC3A-204ENST00000476428 PKN2Q16513 984 aaKnown RBP24.77■■□□□ 1.56
MAP1LC3A-204ENST00000476428 FAM83BQ5T0W9 1011 aa24.77■■□□□ 1.56
MAP1LC3A-204ENST00000476428 GTF3C2Q8WUA4 911 aaPredicted RBP24.77■■□□□ 1.56
MAP1LC3A-204ENST00000476428 ANO2Q9NQ90 1003 aa24.77■■□□□ 1.56
MAP1LC3A-204ENST00000476428 HOXC10Q9NYD6 342 aa24.77■■□□□ 1.56
MAP1LC3A-204ENST00000476428 SPDYE16A6NNV3 312 aaPredicted RBP24.76■■□□□ 1.55
MAP1LC3A-204ENST00000476428 NT5C2P49902 561 aa24.76■■□□□ 1.55
MAP1LC3A-204ENST00000476428 Q3C1V9 767 aa24.76■■□□□ 1.55
MAP1LC3A-204ENST00000476428 LBX2Q6XYB7 198 aa24.76■■□□□ 1.55
MAP1LC3A-204ENST00000476428 GMCL1P1Q8NEA9 526 aa24.76■■□□□ 1.55
MAP1LC3A-204ENST00000476428 TRIM47Q96LD4 638 aa24.76■■□□□ 1.55
MAP1LC3A-204ENST00000476428 NUP88Q99567 741 aaPredicted RBP24.76■■□□□ 1.55
MAP1LC3A-204ENST00000476428 KRT23Q9C075 422 aa24.76■■□□□ 1.55
MAP1LC3A-204ENST00000476428 TAF6LQ9Y6J9 622 aa24.76■■□□□ 1.55
MAP1LC3A-204ENST00000476428 CNMDO75829 334 aa24.75■■□□□ 1.55
MAP1LC3A-204ENST00000476428 FLOT1O75955 427 aa24.75■■□□□ 1.55
MAP1LC3A-204ENST00000476428 FMNL1O95466 1100 aaPredicted RBP24.75■■□□□ 1.55
MAP1LC3A-204ENST00000476428 DSG3P32926 999 aa24.75■■□□□ 1.55
MAP1LC3A-204ENST00000476428 SLFN13Q68D06 897 aa24.75■■□□□ 1.55
MAP1LC3A-204ENST00000476428 GPRC5AQ8NFJ5 357 aa24.75■■□□□ 1.55
MAP1LC3A-204ENST00000476428 PAGR1Q9BTK6 254 aa24.75■■□□□ 1.55
MAP1LC3A-204ENST00000476428 CNNM2Q9H8M5 875 aa24.75■■□□□ 1.55
MAP1LC3A-204ENST00000476428 ZSWIM5Q9P217 1185 aa24.75■■□□□ 1.55
MAP1LC3A-204ENST00000476428 RABGAP1Q9Y3P9 1069 aa24.75■■□□□ 1.55
MAP1LC3A-204ENST00000476428 FCGRTP55899 365 aa24.74■■□□□ 1.55
MAP1LC3A-204ENST00000476428 ZKSCAN3Q9BRR0 538 aa24.74■■□□□ 1.55
MAP1LC3A-204ENST00000476428 FBXO28Q9NVF7 368 aa24.74■■□□□ 1.55
MAP1LC3A-204ENST00000476428 GNRH1P01148 92 aa24.73■■□□□ 1.55
MAP1LC3A-204ENST00000476428 ERVK-9P63128 1117 aa24.73■■□□□ 1.55
MAP1LC3A-204ENST00000476428 ERVK-24P63145 666 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms