RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 PKN1Q16512 942 aa9.51□□□□□ -0.89
VAPB-205ENST00000476395 MMS22LQ6ZRQ5 1243 aa9.51□□□□□ -0.89
VAPB-205ENST00000476395 COL16A1Q07092 1604 aaPredicted RBP9.51□□□□□ -0.89
VAPB-205ENST00000476395 CCDC151A5D8V7 595 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 EXOC5O00471 708 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 CUTAO60888 179 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 CYP19A1P11511 503 aaPredicted RBP9.5□□□□□ -0.89
VAPB-205ENST00000476395 CASP8Q14790 479 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 RINLQ6ZS11 566 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 SH3RF1Q7Z6J0 888 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 NOSTRINQ8IVI9 506 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 GSPT2Q8IYD1 628 aaKnown RBP9.5□□□□□ -0.89
VAPB-205ENST00000476395 IFNL3Q8IZI9 196 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 ZNF384Q8TF68 577 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 SAMSN1Q9NSI8 373 aaKnown RBP9.5□□□□□ -0.89
VAPB-205ENST00000476395 L1RE1Q9UN81 338 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 SOWAHDA6NJG2 315 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 RNF225M0QZC1 329 aaPredicted RBP9.5□□□□□ -0.89
VAPB-205ENST00000476395 ZMYND10O75800 440 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 IL2RBP14784 551 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 IFNAR1P17181 557 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 GPTP24298 496 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 PPARDQ03181 441 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 TRMT44Q8IYL2 757 aaKnown RBP9.5□□□□□ -0.89
VAPB-205ENST00000476395 NOA1Q8NC60 698 aaKnown RBP9.5□□□□□ -0.89
VAPB-205ENST00000476395 TEX33O43247 280 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 CASP1P29466 404 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 MAP2K2P36507 400 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 GSCP56915 257 aaPredicted RBP9.5□□□□□ -0.89
VAPB-205ENST00000476395 MAP2K1Q02750 393 aaPredicted RBP9.5□□□□□ -0.89
VAPB-205ENST00000476395 CUL4BQ13620 913 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 LCORLQ8N3X6 602 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 TNFRSF25Q93038 417 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 SERTAD1Q9UHV2 236 aa9.5□□□□□ -0.89
VAPB-205ENST00000476395 HNRNPH1P31943 449 aaKnown RBP9.49□□□□□ -0.89
VAPB-205ENST00000476395 CCT5P48643 541 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 ATP2B2Q01814 1243 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 SEC23AQ15436 765 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 ZRSR1Q15695 479 aaKnown RBP9.49□□□□□ -0.89
VAPB-205ENST00000476395 METTL24Q5JXM2 366 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 CPLX2Q6PUV4 134 aaKnown RBP9.49□□□□□ -0.89
VAPB-205ENST00000476395 LDHAL6AQ6ZMR3 332 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 SYNE3Q6ZMZ3 975 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 HELBQ8NG08 1087 aaPredicted RBP9.49□□□□□ -0.89
VAPB-205ENST00000476395 TMEM87BQ96K49 555 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 CPLX1O14810 134 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 ZBTB43O43298 467 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 RNF40O75150 1001 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 TOP1P11387 765 aaKnown RBP9.49□□□□□ -0.89
VAPB-205ENST00000476395 NBPF9Q3BBW0 867 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 JAKMIP3Q5VZ66 844 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 TOM1L2Q6ZVM7 507 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 RALYLQ86SE5 291 aaKnown RBP9.49□□□□□ -0.89
VAPB-205ENST00000476395 MTRQ99707 1265 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 ZKSCAN3Q9BRR0 538 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 ARMT1Q9H993 441 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 COL5A3P25940 1745 aaPredicted RBP9.49□□□□□ -0.89
VAPB-205ENST00000476395 A0A1B0GTH6 734 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 PDE6BP35913 854 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 RAD9BQ6WBX8 426 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 FCHSD1Q86WN1 690 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 ZNF34Q8IZ26 560 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 ANKRD20A12PQ8NF67 263 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 STRN4Q9NRL3 753 aa9.49□□□□□ -0.89
VAPB-205ENST00000476395 TPM1P09493 284 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 FECHP22830 423 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 POSTNQ15063 836 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 HDXQ7Z353 690 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 CRACR2BQ8N4Y2 399 aaPredicted RBP9.48□□□□□ -0.89
VAPB-205ENST00000476395 STAG1Q8WVM7 1258 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 MPHOSPH8Q99549 860 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 BAG1Q99933 345 aaPredicted RBP9.48□□□□□ -0.89
VAPB-205ENST00000476395 JPH2Q9BR39 696 aaPredicted RBP9.48□□□□□ -0.89
VAPB-205ENST00000476395 SLC26A6Q9BXS9 759 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 ZBTB1Q9Y2K1 713 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 POLR2DO15514 142 aaKnown RBP9.48□□□□□ -0.89
VAPB-205ENST00000476395 IDH1O75874 414 aaKnown RBP9.48□□□□□ -0.89
VAPB-205ENST00000476395 IARSP41252 1262 aaKnown RBP9.48□□□□□ -0.89
VAPB-205ENST00000476395 IL17AQ16552 155 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 CDKAL1Q5VV42 579 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 CCDC91Q7Z6B0 441 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 SUGP1Q8IWZ8 645 aaKnown RBP9.48□□□□□ -0.89
VAPB-205ENST00000476395 KRI1Q8N9T8 703 aaKnown RBP9.48□□□□□ -0.89
VAPB-205ENST00000476395 ENOX1Q8TC92 643 aaKnown RBP9.48□□□□□ -0.89
VAPB-205ENST00000476395 CDC5LQ99459 802 aaKnown RBP9.48□□□□□ -0.89
VAPB-205ENST00000476395 CSRNP2Q9H175 543 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 PRDM11Q9NQV5 511 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 RAI14Q9P0K7 980 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 SAMM50Q9Y512 469 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 SBF2Q86WG5 1849 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 GOLGA8AA7E2F4 631 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 MYO1FO00160 1098 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 MBD4O95243 580 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 SYF2O95926 243 aaKnown RBP9.48□□□□□ -0.89
VAPB-205ENST00000476395 DIS3L2Q8IYB7 885 aaKnown RBP9.48□□□□□ -0.89
VAPB-205ENST00000476395 KIRREL3Q8IZU9 778 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 SPATA5Q8NB90 893 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 CPLX3Q8WVH0 158 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 DONSONQ9NYP3 566 aa9.48□□□□□ -0.89
VAPB-205ENST00000476395 NFE2L3Q9Y4A8 694 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms