RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 PARK7Q99497 189 aaKnown RBP11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 WDR18Q9BV38 432 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 EHD4Q9H223 541 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 DCP1AQ9NPI6 582 aaPredicted RBP11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 ECHDC1Q9NTX5 307 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 ZBTB21Q9ULJ3 1066 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 SLC45A1Q9Y2W3 748 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 RLFQ13129 1914 aa11.26□□□□□ -0.61
SEMA3C-208ENST00000475955 TCHHQ07283 1943 aa11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 POTEFA5A3E0 1075 aa11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 MBD4O95243 580 aa11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 GH2P01242 217 aa11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 HLA-DOAP06340 250 aa11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 ASNSP08243 561 aa11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 ZSCAN22P10073 491 aaPredicted RBP11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 GUCY1A2P33402 732 aa11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 PSMC4P43686 418 aa11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 HMGN5P82970 282 aaKnown RBP11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 MTMR2Q13614 643 aa11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 POTEEQ6S8J3 1075 aa11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 PROCA1Q8NCQ7 364 aaPredicted RBP11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 CRNKL1Q9BZJ0 848 aaKnown RBP11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 PUS7LQ9H0K6 701 aaKnown RBP11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 SERPINB13Q9UIV8 391 aa11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 SMC3Q9UQE7 1217 aa11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 PARP14Q460N5 1801 aa11.25□□□□□ -0.61
SEMA3C-208ENST00000475955 CYP2D7A0A087X1C5 515 aa11.24□□□□□ -0.61
SEMA3C-208ENST00000475955 PEX10O60683 326 aa11.24□□□□□ -0.61
SEMA3C-208ENST00000475955 PDCP20941 246 aa11.24□□□□□ -0.61
SEMA3C-208ENST00000475955 OSBPP22059 807 aa11.24□□□□□ -0.61
SEMA3C-208ENST00000475955 BACE1P56817 501 aa11.24□□□□□ -0.61
SEMA3C-208ENST00000475955 UBE3CQ15386 1083 aa11.24□□□□□ -0.61
SEMA3C-208ENST00000475955 VPS53Q5VIR6 699 aa11.24□□□□□ -0.61
SEMA3C-208ENST00000475955 SLC44A5Q8NCS7 719 aa11.24□□□□□ -0.61
SEMA3C-208ENST00000475955 PRIMPOLQ96LW4 560 aa11.24□□□□□ -0.61
SEMA3C-208ENST00000475955 DIAPH3Q9NSV4 1193 aa11.24□□□□□ -0.61
SEMA3C-208ENST00000475955 MCM9Q9NXL9 1143 aa11.24□□□□□ -0.61
SEMA3C-208ENST00000475955 RBM27Q9P2N5 1060 aaKnown RBP11.24□□□□□ -0.61
SEMA3C-208ENST00000475955 GABRQQ9UN88 632 aa11.24□□□□□ -0.61
SEMA3C-208ENST00000475955 GREB1LQ9C091 1923 aaPredicted RBP11.24□□□□□ -0.61
SEMA3C-208ENST00000475955 MKI67P46013 3256 aaKnown RBP11.24□□□□□ -0.61
SEMA3C-208ENST00000475955 GOLGA6L6A8MZA4 724 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 POLR3DP05423 398 aaPredicted RBP11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 PSMA5P28066 241 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 KIF22Q14807 665 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 ANKRD1Q15327 319 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 TTC6Q86TZ1 520 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 ANKRD13CQ8N6S4 541 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 PI4K2BQ8TCG2 481 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 ACER1Q8TDN7 264 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 SH3TC2Q8TF17 1288 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 KCNB2Q92953 911 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 DYNLL2Q96FJ2 89 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 ZNF333Q96JL9 665 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 TTC14Q96N46 770 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 TRIM34Q9BYJ4 488 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 ASCC2Q9H1I8 757 aaPredicted RBP11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 AS3MTQ9HBK9 375 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 EMILIN3Q9NT22 766 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 GINM1Q9NU53 330 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 SRRDQ9UH36 339 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 SNX14Q9Y5W7 946 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 CCDC171Q6TFL3 1326 aa11.23□□□□□ -0.61
SEMA3C-208ENST00000475955 USP17L10C9JJH3 530 aa11.22□□□□□ -0.61
SEMA3C-208ENST00000475955 STX6O43752 255 aa11.22□□□□□ -0.61
SEMA3C-208ENST00000475955 FMNL1O95466 1100 aaPredicted RBP11.22□□□□□ -0.61
SEMA3C-208ENST00000475955 GNRH1P01148 92 aa11.22□□□□□ -0.61
SEMA3C-208ENST00000475955 ZKSCAN1P17029 563 aaPredicted RBP11.22□□□□□ -0.61
SEMA3C-208ENST00000475955 PRKCZQ05513 592 aa11.22□□□□□ -0.61
SEMA3C-208ENST00000475955 ARHGEF6Q15052 776 aa11.22□□□□□ -0.61
SEMA3C-208ENST00000475955 ABCB5Q2M3G0 1257 aa11.22□□□□□ -0.61
SEMA3C-208ENST00000475955 CERKLQ49MI3 558 aaPredicted RBP11.22□□□□□ -0.61
SEMA3C-208ENST00000475955 KBTBD3Q8NAB2 608 aa11.22□□□□□ -0.61
SEMA3C-208ENST00000475955 OSBP2Q969R2 916 aa11.22□□□□□ -0.61
SEMA3C-208ENST00000475955 LSG1Q9H089 658 aaKnown RBP11.22□□□□□ -0.61
SEMA3C-208ENST00000475955 CYP46A1Q9Y6A2 500 aa11.22□□□□□ -0.61
SEMA3C-208ENST00000475955 MYH4Q9Y623 1939 aa11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 COL11A1P12107 1806 aaPredicted RBP11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 MYPNQ86TC9 1320 aa11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 C19orf81C9J6K1 198 aa11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 USP17L12C9JPN9 530 aa11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 USP17L21D6R901 530 aa11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 F13A1P00488 732 aa11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 MYCP01106 439 aaPredicted RBP11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 EN2P19622 333 aaPredicted RBP11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 HOXA7P31268 230 aaPredicted RBP11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 SEPT2Q15019 361 aa11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 SLC9C1Q4G0N8 1177 aa11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 C12orf60Q5U649 245 aa11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 RNF20Q5VTR2 975 aa11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 TICAM2Q86XR7 235 aa11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 SIAH1Q8IUQ4 282 aa11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 SMCR8Q8TEV9 937 aaPredicted RBP11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 EVI5LQ96CN4 794 aa11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 STRBPQ96SI9 672 aaKnown RBP11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 P2RX7Q99572 595 aaKnown RBP11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 ALDH8A1Q9H2A2 487 aaPredicted RBP11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 TXNRD2Q9NNW7 524 aa11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 ATP8A2Q9NTI2 1148 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms