RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 IFNAR1P17181 557 aa14.22□□□□□ -0.13
MRPL55-227ENST00000475832 RXRAP19793 462 aa14.22□□□□□ -0.13
MRPL55-227ENST00000475832 FMR1Q06787 632 aaKnown RBP eCLIP14.22□□□□□ -0.13
MRPL55-227ENST00000475832 TRIM29Q14134 588 aa14.22□□□□□ -0.13
MRPL55-227ENST00000475832 NBPF9Q3BBW0 867 aa14.22□□□□□ -0.13
MRPL55-227ENST00000475832 KRT26Q7Z3Y9 468 aa14.22□□□□□ -0.13
MRPL55-227ENST00000475832 APOBEC3FQ8IUX4 373 aaKnown RBP14.22□□□□□ -0.13
MRPL55-227ENST00000475832 PNMA1Q8ND90 353 aa14.22□□□□□ -0.13
MRPL55-227ENST00000475832 RGS22Q8NE09 1264 aa14.22□□□□□ -0.13
MRPL55-227ENST00000475832 DCPSQ96C86 337 aaKnown RBP14.22□□□□□ -0.13
MRPL55-227ENST00000475832 MYL10Q9BUA6 226 aa14.22□□□□□ -0.13
MRPL55-227ENST00000475832 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.22□□□□□ -0.13
MRPL55-227ENST00000475832 SENP2Q9HC62 589 aa14.22□□□□□ -0.13
MRPL55-227ENST00000475832 GGA3Q9NZ52 723 aa14.22□□□□□ -0.13
MRPL55-227ENST00000475832 FOCADQ5VW36 1801 aa14.21□□□□□ -0.13
MRPL55-227ENST00000475832 DDX11L8A8MPP1 907 aa14.21□□□□□ -0.13
MRPL55-227ENST00000475832 NMT2O60551 498 aa14.21□□□□□ -0.13
MRPL55-227ENST00000475832 AOC2O75106 756 aa14.21□□□□□ -0.13
MRPL55-227ENST00000475832 TTLL1O95922 423 aa14.21□□□□□ -0.13
MRPL55-227ENST00000475832 XBP1P17861 261 aa14.21□□□□□ -0.13
MRPL55-227ENST00000475832 SHMT1P34896 483 aa14.21□□□□□ -0.13
MRPL55-227ENST00000475832 ADD1P35611 737 aaKnown RBP14.21□□□□□ -0.13
MRPL55-227ENST00000475832 ANGEL2Q5VTE6 544 aaKnown RBP14.21□□□□□ -0.13
MRPL55-227ENST00000475832 TATDN1Q6P1N9 297 aa14.21□□□□□ -0.13
MRPL55-227ENST00000475832 TMEM179Q6ZVK1 233 aa14.21□□□□□ -0.13
MRPL55-227ENST00000475832 SH3BP5LQ7L8J4 393 aa14.21□□□□□ -0.13
MRPL55-227ENST00000475832 USP48Q86UV5 1035 aa14.21□□□□□ -0.13
MRPL55-227ENST00000475832 METTL16Q86W50 562 aaKnown RBP14.21□□□□□ -0.13
MRPL55-227ENST00000475832 LZTS2Q9BRK4 669 aa14.21□□□□□ -0.13
MRPL55-227ENST00000475832 IL17RBQ9NRM6 502 aa14.21□□□□□ -0.13
MRPL55-227ENST00000475832 RBM27Q9P2N5 1060 aaKnown RBP14.21□□□□□ -0.13
MRPL55-227ENST00000475832 CASP8AP2Q9UKL3 1982 aa14.21□□□□□ -0.13
MRPL55-227ENST00000475832 MYH1P12882 1939 aa14.21□□□□□ -0.14
MRPL55-227ENST00000475832 STK36Q9NRP7 1315 aa14.2□□□□□ -0.14
MRPL55-227ENST00000475832 TBC1D12O60347 775 aa14.2□□□□□ -0.14
MRPL55-227ENST00000475832 FMNL1O95466 1100 aaPredicted RBP14.2□□□□□ -0.14
MRPL55-227ENST00000475832 CTDNEP1O95476 244 aa14.2□□□□□ -0.14
MRPL55-227ENST00000475832 AKR1B1P15121 316 aa14.2□□□□□ -0.14
MRPL55-227ENST00000475832 TROAPQ12815 778 aa14.2□□□□□ -0.14
MRPL55-227ENST00000475832 ABCB5Q2M3G0 1257 aa14.2□□□□□ -0.14
MRPL55-227ENST00000475832 CEP95Q96GE4 821 aa14.2□□□□□ -0.14
MRPL55-227ENST00000475832 C8orf76Q96K31 380 aa14.2□□□□□ -0.14
MRPL55-227ENST00000475832 TMEM47Q9BQJ4 181 aa14.2□□□□□ -0.14
MRPL55-227ENST00000475832 SLC26A6Q9BXS9 759 aa14.2□□□□□ -0.14
MRPL55-227ENST00000475832 KANSL2Q9H9L4 492 aa14.2□□□□□ -0.14
MRPL55-227ENST00000475832 MTMR4Q9NYA4 1195 aa14.2□□□□□ -0.14
MRPL55-227ENST00000475832 TRPM7Q96QT4 1865 aa14.2□□□□□ -0.14
MRPL55-227ENST00000475832 POLR2AP24928 1970 aaKnown RBP14.2□□□□□ -0.14
MRPL55-227ENST00000475832 ADM5C9JUS6 153 aa14.19□□□□□ -0.14
MRPL55-227ENST00000475832 DEXIO95424 95 aa14.19□□□□□ -0.14
MRPL55-227ENST00000475832 F13A1P00488 732 aa14.19□□□□□ -0.14
MRPL55-227ENST00000475832 CDC27P30260 824 aa14.19□□□□□ -0.14
MRPL55-227ENST00000475832 RASA3Q14644 834 aa14.19□□□□□ -0.14
MRPL55-227ENST00000475832 NFKBIBQ15653 356 aa14.19□□□□□ -0.14
MRPL55-227ENST00000475832 CSPP1Q1MSJ5 1256 aa14.19□□□□□ -0.14
MRPL55-227ENST00000475832 FOXD4L5Q5VV16 416 aaPredicted RBP14.19□□□□□ -0.14
MRPL55-227ENST00000475832 RCSD1Q6JBY9 416 aa14.19□□□□□ -0.14
MRPL55-227ENST00000475832 SULF1Q8IWU6 871 aa14.19□□□□□ -0.14
MRPL55-227ENST00000475832 FOXD4L4Q8WXT5 416 aaPredicted RBP14.19□□□□□ -0.14
MRPL55-227ENST00000475832 ZSCAN16Q9H4T2 348 aaPredicted RBP14.19□□□□□ -0.14
MRPL55-227ENST00000475832 MTMR6Q9Y217 621 aa14.19□□□□□ -0.14
MRPL55-227ENST00000475832 PPP2R3BQ9Y5P8 575 aa14.19□□□□□ -0.14
MRPL55-227ENST00000475832 ECM29Q5VYK3 1845 aa14.19□□□□□ -0.14
MRPL55-227ENST00000475832 CDK5RAP2Q96SN8 1893 aa14.18□□□□□ -0.14
MRPL55-227ENST00000475832 CELF2O95319 508 aaKnown RBP14.18□□□□□ -0.14
MRPL55-227ENST00000475832 PARP1P09874 1014 aaKnown RBP14.18□□□□□ -0.14
MRPL55-227ENST00000475832 ATP2B2Q01814 1243 aa14.18□□□□□ -0.14
MRPL55-227ENST00000475832 PKP1Q13835 747 aa14.18□□□□□ -0.14
MRPL55-227ENST00000475832 GRM4Q14833 912 aa14.18□□□□□ -0.14
MRPL55-227ENST00000475832 DCAF15Q66K64 600 aa14.18□□□□□ -0.14
MRPL55-227ENST00000475832 DLK2Q6UY11 383 aa14.18□□□□□ -0.14
MRPL55-227ENST00000475832 CLEC17AQ6ZS10 378 aa14.18□□□□□ -0.14
MRPL55-227ENST00000475832 ALG1Q9BT22 464 aa14.18□□□□□ -0.14
MRPL55-227ENST00000475832 RNF26Q9BY78 433 aaPredicted RBP14.18□□□□□ -0.14
MRPL55-227ENST00000475832 TMEM39BQ9GZU3 492 aa14.18□□□□□ -0.14
MRPL55-227ENST00000475832 CLIP2Q9UDT6 1046 aa14.18□□□□□ -0.14
MRPL55-227ENST00000475832 TLL2Q9Y6L7 1015 aa14.18□□□□□ -0.14
MRPL55-227ENST00000475832 THSD7BQ9C0I4 1608 aa14.17□□□□□ -0.14
MRPL55-227ENST00000475832 IGKV6D-41A0A0C4DH26 115 aa14.17□□□□□ -0.14
MRPL55-227ENST00000475832 MCM4P33991 863 aa14.17□□□□□ -0.14
MRPL55-227ENST00000475832 NOVP48745 357 aa14.17□□□□□ -0.14
MRPL55-227ENST00000475832 GNL2Q13823 731 aaKnown RBP14.17□□□□□ -0.14
MRPL55-227ENST00000475832 SAFBQ15424 915 aaKnown RBP eCLIP14.17□□□□□ -0.14
MRPL55-227ENST00000475832 NTRK3Q16288 839 aa14.17□□□□□ -0.14
MRPL55-227ENST00000475832 TMTC3Q6ZXV5 915 aa14.17□□□□□ -0.14
MRPL55-227ENST00000475832 SAPCD2Q86UD0 394 aa14.17□□□□□ -0.14
MRPL55-227ENST00000475832 PHKBQ93100 1093 aa14.17□□□□□ -0.14
MRPL55-227ENST00000475832 HHIPL1Q96JK4 782 aa14.17□□□□□ -0.14
MRPL55-227ENST00000475832 DEFB129Q9H1M3 183 aa14.17□□□□□ -0.14
MRPL55-227ENST00000475832 SH2D4AQ9H788 454 aa14.17□□□□□ -0.14
MRPL55-227ENST00000475832 ARHGEF10LQ9HCE6 1279 aa14.17□□□□□ -0.14
MRPL55-227ENST00000475832 FAM217BQ9NTX9 383 aaPredicted RBP14.17□□□□□ -0.14
MRPL55-227ENST00000475832 GINM1Q9NU53 330 aa14.17□□□□□ -0.14
MRPL55-227ENST00000475832 NYAP2Q9P242 653 aa14.17□□□□□ -0.14
MRPL55-227ENST00000475832 SYNPO2Q9UMS6 1093 aa14.17□□□□□ -0.14
MRPL55-227ENST00000475832 ZDHHC9Q9Y397 364 aa14.17□□□□□ -0.14
MRPL55-227ENST00000475832 FAM196BA6NMK8 535 aa14.16□□□□□ -0.14
MRPL55-227ENST00000475832 PRPF3O43395 683 aaKnown RBP14.16□□□□□ -0.14
MRPL55-227ENST00000475832 BAG4O95429 457 aaKnown RBP14.16□□□□□ -0.14
MRPL55-227ENST00000475832 ICA1Q05084 483 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms