RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 C1QTNF1Q9BXJ1 281 aa17.11■□□□□ 0.33
FAM3A-218ENST00000475657 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
FAM3A-218ENST00000475657 UQCRFS1P1P0C7P4 283 aa17.1■□□□□ 0.33
FAM3A-218ENST00000475657 FAM47AQ5JRC9 791 aa17.1■□□□□ 0.33
FAM3A-218ENST00000475657 GORABQ5T7V8 394 aa17.1■□□□□ 0.33
FAM3A-218ENST00000475657 MOV10L1Q9BXT6 1211 aaKnown RBP17.1■□□□□ 0.33
FAM3A-218ENST00000475657 HOXC10Q9NYD6 342 aa17.1■□□□□ 0.33
FAM3A-218ENST00000475657 SYNGAP1Q96PV0 1343 aa17.1■□□□□ 0.33
FAM3A-218ENST00000475657 ZNF236Q9UL36 1845 aa17.1■□□□□ 0.33
FAM3A-218ENST00000475657 COBLO75128 1261 aa17.09■□□□□ 0.33
FAM3A-218ENST00000475657 MCAMP43121 646 aa17.09■□□□□ 0.33
FAM3A-218ENST00000475657 ZYXQ15942 572 aaKnown RBP17.09■□□□□ 0.33
FAM3A-218ENST00000475657 ANKRD33Q7Z3H0 272 aa17.09■□□□□ 0.33
FAM3A-218ENST00000475657 RNF180Q86T96 592 aa17.09■□□□□ 0.33
FAM3A-218ENST00000475657 TMEM39AQ9NV64 488 aa17.09■□□□□ 0.33
FAM3A-218ENST00000475657 COG2Q14746 738 aa17.08■□□□□ 0.32
FAM3A-218ENST00000475657 ALDH1L2Q3SY69 923 aa17.08■□□□□ 0.32
FAM3A-218ENST00000475657 IL27Q8NEV9 243 aa17.08■□□□□ 0.32
FAM3A-218ENST00000475657 PPM1EQ8WY54 764 aa17.08■□□□□ 0.32
FAM3A-218ENST00000475657 SPATC1LQ9H0A9 340 aa17.08■□□□□ 0.32
FAM3A-218ENST00000475657 EHD4Q9H223 541 aa17.08■□□□□ 0.32
FAM3A-218ENST00000475657 MROH8Q9H579 483 aa17.08■□□□□ 0.32
FAM3A-218ENST00000475657 RPAP3Q9H6T3 665 aaPredicted RBP17.08■□□□□ 0.32
FAM3A-218ENST00000475657 XPNPEP3Q9NQH7 507 aa17.08■□□□□ 0.32
FAM3A-218ENST00000475657 NOB1Q9ULX3 412 aaKnown RBP17.08■□□□□ 0.32
FAM3A-218ENST00000475657 PQBP1O60828 265 aaKnown RBP17.07■□□□□ 0.32
FAM3A-218ENST00000475657 RARBP10826 455 aa17.07■□□□□ 0.32
FAM3A-218ENST00000475657 FAAP100Q0VG06 881 aa17.07■□□□□ 0.32
FAM3A-218ENST00000475657 MTX1Q13505 466 aa17.07■□□□□ 0.32
FAM3A-218ENST00000475657 PRAMEF19Q5SWL8 479 aa17.07■□□□□ 0.32
FAM3A-218ENST00000475657 RASIP1Q5U651 963 aa17.07■□□□□ 0.32
FAM3A-218ENST00000475657 CCDC174Q6PII3 467 aa17.07■□□□□ 0.32
FAM3A-218ENST00000475657 MB21D1Q8N884 522 aa17.07■□□□□ 0.32
FAM3A-218ENST00000475657 SLC44A5Q8NCS7 719 aa17.07■□□□□ 0.32
FAM3A-218ENST00000475657 ACER1Q8TDN7 264 aa17.07■□□□□ 0.32
FAM3A-218ENST00000475657 MAML3Q96JK9 1138 aa17.07■□□□□ 0.32
FAM3A-218ENST00000475657 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.07■□□□□ 0.32
FAM3A-218ENST00000475657 CHD9Q3L8U1 2897 aa17.07■□□□□ 0.32
FAM3A-218ENST00000475657 DCDC2CA8MYV0 355 aa17.06■□□□□ 0.32
FAM3A-218ENST00000475657 TIMP1P01033 207 aa17.06■□□□□ 0.32
FAM3A-218ENST00000475657 ERCC3P19447 782 aa17.06■□□□□ 0.32
FAM3A-218ENST00000475657 RAB3GAP1Q15042 981 aa17.06■□□□□ 0.32
FAM3A-218ENST00000475657 ADGRA1Q86SQ6 560 aa17.06■□□□□ 0.32
FAM3A-218ENST00000475657 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.06■□□□□ 0.32
FAM3A-218ENST00000475657 TSEN34Q9BSV6 310 aaKnown RBP17.06■□□□□ 0.32
FAM3A-218ENST00000475657 PBX4Q9BYU1 374 aa17.06■□□□□ 0.32
FAM3A-218ENST00000475657 PRDM12Q9H4Q4 367 aa17.06■□□□□ 0.32
FAM3A-218ENST00000475657 SAP30BPQ9UHR5 308 aaKnown RBP17.06■□□□□ 0.32
FAM3A-218ENST00000475657 SERPINB13Q9UIV8 391 aa17.06■□□□□ 0.32
FAM3A-218ENST00000475657 ROBO3Q96MS0 1386 aa17.05■□□□□ 0.32
FAM3A-218ENST00000475657 A0A1W2PQ45 241 aaPredicted RBP17.05■□□□□ 0.32
FAM3A-218ENST00000475657 A0A1W2PQY0 241 aa17.05■□□□□ 0.32
FAM3A-218ENST00000475657 SRGAP3O43295 1099 aa17.05■□□□□ 0.32
FAM3A-218ENST00000475657 ADGRE1Q14246 886 aa17.05■□□□□ 0.32
FAM3A-218ENST00000475657 ABCB5Q2M3G0 1257 aa17.05■□□□□ 0.32
FAM3A-218ENST00000475657 CERKLQ49MI3 558 aaPredicted RBP17.05■□□□□ 0.32
FAM3A-218ENST00000475657 MFSD5Q6N075 450 aa17.05■□□□□ 0.32
FAM3A-218ENST00000475657 CERS3Q8IU89 383 aa17.05■□□□□ 0.32
FAM3A-218ENST00000475657 TRMT2AQ8IZ69 625 aaKnown RBP17.05■□□□□ 0.32
FAM3A-218ENST00000475657 CABP5Q9NP86 173 aa17.05■□□□□ 0.32
FAM3A-218ENST00000475657 CXXC1Q9P0U4 656 aaPredicted RBP17.05■□□□□ 0.32
FAM3A-218ENST00000475657 PPIGQ13427 754 aaKnown RBP eCLIP17.04■□□□□ 0.32
FAM3A-218ENST00000475657 TSPYL2Q9H2G4 693 aaPredicted RBP17.04■□□□□ 0.32
FAM3A-218ENST00000475657 TBX21Q9UL17 535 aa17.04■□□□□ 0.32
FAM3A-218ENST00000475657 FOCADQ5VW36 1801 aa17.03■□□□□ 0.32
FAM3A-218ENST00000475657 PGK1P00558 417 aa17.03■□□□□ 0.32
FAM3A-218ENST00000475657 BMP1P13497 986 aa17.03■□□□□ 0.32
FAM3A-218ENST00000475657 PBX2P40425 430 aa17.03■□□□□ 0.32
FAM3A-218ENST00000475657 TMEM240Q5SV17 173 aa17.03■□□□□ 0.32
FAM3A-218ENST00000475657 CCDC129Q6ZRS4 1044 aa17.03■□□□□ 0.32
FAM3A-218ENST00000475657 C16orf59Q7L2K0 433 aa17.03■□□□□ 0.32
FAM3A-218ENST00000475657 TTC6Q86TZ1 520 aa17.03■□□□□ 0.32
FAM3A-218ENST00000475657 NUP133Q8WUM0 1156 aa17.03■□□□□ 0.32
FAM3A-218ENST00000475657 MEIS3Q99687 375 aa17.03■□□□□ 0.32
FAM3A-218ENST00000475657 SMCHD1A6NHR9 2005 aa17.03■□□□□ 0.32
FAM3A-218ENST00000475657 FCER1AP12319 257 aa17.02■□□□□ 0.32
FAM3A-218ENST00000475657 RAB30Q15771 203 aa17.02■□□□□ 0.32
FAM3A-218ENST00000475657 STARD7Q9NQZ5 370 aa17.02■□□□□ 0.32
FAM3A-218ENST00000475657 DIS3Q9Y2L1 958 aaKnown RBP17.02■□□□□ 0.32
FAM3A-218ENST00000475657 MOXD2PA6NHM9 499 aa17.01■□□□□ 0.31
FAM3A-218ENST00000475657 GRXCR1A8MXD5 290 aa17.01■□□□□ 0.31
FAM3A-218ENST00000475657 ADAMTS4O75173 837 aa17.01■□□□□ 0.31
FAM3A-218ENST00000475657 CYP2E1P05181 493 aaPredicted RBP17.01■□□□□ 0.31
FAM3A-218ENST00000475657 AKR1A1P14550 325 aa17.01■□□□□ 0.31
FAM3A-218ENST00000475657 GUCY1A2P33402 732 aa17.01■□□□□ 0.31
FAM3A-218ENST00000475657 ACLYP53396 1101 aa17.01■□□□□ 0.31
FAM3A-218ENST00000475657 CCDC85BQ15834 202 aaPredicted RBP17.01■□□□□ 0.31
FAM3A-218ENST00000475657 AAK1Q2M2I8 961 aa17.01■□□□□ 0.31
FAM3A-218ENST00000475657 PSRC1Q6PGN9 363 aaPredicted RBP17.01■□□□□ 0.31
FAM3A-218ENST00000475657 NCAPG2Q86XI2 1143 aa17.01■□□□□ 0.31
FAM3A-218ENST00000475657 ZNF512BQ96KM6 892 aaPredicted RBP17.01■□□□□ 0.31
FAM3A-218ENST00000475657 TINF2Q9BSI4 451 aa17.01■□□□□ 0.31
FAM3A-218ENST00000475657 API5Q9BZZ5 524 aaKnown RBP17.01■□□□□ 0.31
FAM3A-218ENST00000475657 SNRKQ9NRH2 765 aa17.01■□□□□ 0.31
FAM3A-218ENST00000475657 MSRAQ9UJ68 235 aa17.01■□□□□ 0.31
FAM3A-218ENST00000475657 HCN4Q9Y3Q4 1203 aa17.01■□□□□ 0.31
FAM3A-218ENST00000475657 CDK5RAP2Q96SN8 1893 aa17.01■□□□□ 0.31
FAM3A-218ENST00000475657 MROH7Q68CQ1 1323 aa17■□□□□ 0.31
FAM3A-218ENST00000475657 SLC25A27O95847 323 aa17■□□□□ 0.31
FAM3A-218ENST00000475657 GNAI3P08754 354 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms