RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 PTPREP23469 700 aa17.63■□□□□ 0.41
RPUSD3-215ENST00000475470 FBXO2Q9UK22 296 aaPredicted RBP17.63■□□□□ 0.41
RPUSD3-215ENST00000475470 KCNH3Q9ULD8 1083 aa17.63■□□□□ 0.41
RPUSD3-215ENST00000475470 SLX4Q8IY92 1834 aa17.63■□□□□ 0.41
RPUSD3-215ENST00000475470 GOLGA6L19H0YKK7 550 aa17.63■□□□□ 0.41
RPUSD3-215ENST00000475470 EARS2Q5JPH6 523 aaKnown RBP17.63■□□□□ 0.41
RPUSD3-215ENST00000475470 CEP57L1Q8IYX8 460 aa17.63■□□□□ 0.41
RPUSD3-215ENST00000475470 NAT10Q9H0A0 1025 aaKnown RBP17.63■□□□□ 0.41
RPUSD3-215ENST00000475470 KCNQ5Q9NR82 932 aa17.63■□□□□ 0.41
RPUSD3-215ENST00000475470 A0A087WWV3 80 aa17.62■□□□□ 0.41
RPUSD3-215ENST00000475470 NPY5RQ15761 445 aa17.62■□□□□ 0.41
RPUSD3-215ENST00000475470 DDX4Q9NQI0 724 aaKnown RBP17.62■□□□□ 0.41
RPUSD3-215ENST00000475470 FAM13BQ9NYF5 915 aa17.62■□□□□ 0.41
RPUSD3-215ENST00000475470 ZKSCAN5Q9Y2L8 839 aa17.62■□□□□ 0.41
RPUSD3-215ENST00000475470 ECE2O60344 883 aa17.62■□□□□ 0.41
RPUSD3-215ENST00000475470 IQCB1Q15051 598 aa17.62■□□□□ 0.41
RPUSD3-215ENST00000475470 STRIP1Q5VSL9 837 aa17.62■□□□□ 0.41
RPUSD3-215ENST00000475470 CDC42EP5Q6NZY7 148 aa17.62■□□□□ 0.41
RPUSD3-215ENST00000475470 TNFRSF25Q93038 417 aa17.62■□□□□ 0.41
RPUSD3-215ENST00000475470 CEP95Q96GE4 821 aa17.62■□□□□ 0.41
RPUSD3-215ENST00000475470 LZTS2Q9BRK4 669 aa17.62■□□□□ 0.41
RPUSD3-215ENST00000475470 SRPRBQ9Y5M8 271 aaKnown RBP17.62■□□□□ 0.41
RPUSD3-215ENST00000475470 PALM3A6NDB9 673 aaPredicted RBP17.61■□□□□ 0.41
RPUSD3-215ENST00000475470 BECN2A8MW95 431 aa17.61■□□□□ 0.41
RPUSD3-215ENST00000475470 VEGFAP15692 232 aaPredicted RBP17.61■□□□□ 0.41
RPUSD3-215ENST00000475470 CALML3P27482 149 aa17.61■□□□□ 0.41
RPUSD3-215ENST00000475470 CRKP46108 304 aa17.61■□□□□ 0.41
RPUSD3-215ENST00000475470 SPECC1Q5M775 1068 aa17.61■□□□□ 0.41
RPUSD3-215ENST00000475470 SH3GLB2Q9NR46 395 aa17.61■□□□□ 0.41
RPUSD3-215ENST00000475470 TOP1P11387 765 aaKnown RBP17.61■□□□□ 0.41
RPUSD3-215ENST00000475470 APOBEC3HQ6NTF7 200 aaKnown RBP17.61■□□□□ 0.41
RPUSD3-215ENST00000475470 KIAA0825Q8IV33 1275 aa17.61■□□□□ 0.41
RPUSD3-215ENST00000475470 ZNF579Q8NAF0 562 aaKnown RBP17.61■□□□□ 0.41
RPUSD3-215ENST00000475470 BMP15O95972 392 aa17.6■□□□□ 0.41
RPUSD3-215ENST00000475470 GOLGA8HP0CJ92 632 aa17.6■□□□□ 0.41
RPUSD3-215ENST00000475470 GRIN1Q05586 938 aa17.6■□□□□ 0.41
RPUSD3-215ENST00000475470 GABPAQ06546 454 aa17.6■□□□□ 0.41
RPUSD3-215ENST00000475470 GPKOWQ92917 476 aaPredicted RBP eCLIP17.6■□□□□ 0.41
RPUSD3-215ENST00000475470 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.6■□□□□ 0.41
RPUSD3-215ENST00000475470 KLRF2D3W0D1 207 aa17.6■□□□□ 0.41
RPUSD3-215ENST00000475470 PARP1P09874 1014 aaKnown RBP17.6■□□□□ 0.41
RPUSD3-215ENST00000475470 FKBP1AP62942 108 aaKnown RBP17.6■□□□□ 0.41
RPUSD3-215ENST00000475470 CNNM3Q8NE01 707 aa17.6■□□□□ 0.41
RPUSD3-215ENST00000475470 TRIM5Q9C035 493 aa17.6■□□□□ 0.41
RPUSD3-215ENST00000475470 OSBPL5Q9H0X9 879 aaPredicted RBP17.6■□□□□ 0.41
RPUSD3-215ENST00000475470 SERPINB13Q9UIV8 391 aa17.6■□□□□ 0.41
RPUSD3-215ENST00000475470 AOC3Q16853 763 aa17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 LONRF3Q496Y0 759 aa17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 NOM1Q5C9Z4 860 aaKnown RBP17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 TTC38Q5R3I4 469 aa17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 KRBA2Q6ZNG9 492 aa17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 PIK3AP1Q6ZUJ8 805 aa17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 ZDHHC15Q96MV8 337 aa17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 SWAP70Q9UH65 585 aa17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 MORC2Q9Y6X9 1032 aaPredicted RBP17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 BIN1O00499 593 aa17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 CYTH3O43739 400 aa17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 HLA-DOAP06340 250 aa17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 RBM5P52756 815 aaKnown RBP eCLIP17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 SF3B2Q13435 895 aaKnown RBP17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 ZNF174Q15697 407 aa17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 DACT2Q5SW24 774 aa17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 BLIDQ8IZY5 108 aa17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 C7orf43Q8WVR3 580 aa17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 MRIQ9BWK5 157 aa17.59■□□□□ 0.41
RPUSD3-215ENST00000475470 ADAMTSL1Q8N6G6 1762 aa17.58■□□□□ 0.41
RPUSD3-215ENST00000475470 NOVP48745 357 aa17.58■□□□□ 0.41
RPUSD3-215ENST00000475470 NLRP12P59046 1061 aa17.58■□□□□ 0.41
RPUSD3-215ENST00000475470 DPCR1Q3MIW9 517 aa17.58■□□□□ 0.41
RPUSD3-215ENST00000475470 CC2D2BQ6DHV5 1058 aa17.58■□□□□ 0.41
RPUSD3-215ENST00000475470 CSRNP2Q9H175 543 aa17.58■□□□□ 0.41
RPUSD3-215ENST00000475470 GOLGA6L6A8MZA4 724 aa17.58■□□□□ 0.4
RPUSD3-215ENST00000475470 AKR1B1P15121 316 aa17.58■□□□□ 0.4
RPUSD3-215ENST00000475470 SLC35G1Q2M3R5 365 aa17.58■□□□□ 0.4
RPUSD3-215ENST00000475470 USP17L2Q6R6M4 530 aa17.58■□□□□ 0.4
RPUSD3-215ENST00000475470 HEATR3Q7Z4Q2 680 aa17.58■□□□□ 0.4
RPUSD3-215ENST00000475470 DHX40Q8IX18 779 aaKnown RBP17.58■□□□□ 0.4
RPUSD3-215ENST00000475470 SPC24Q8NBT2 197 aa17.58■□□□□ 0.4
RPUSD3-215ENST00000475470 SUPT20HQ8NEM7 779 aa17.58■□□□□ 0.4
RPUSD3-215ENST00000475470 CCDC148Q8NFR7 591 aa17.58■□□□□ 0.4
RPUSD3-215ENST00000475470 MTMR4Q9NYA4 1195 aa17.58■□□□□ 0.4
RPUSD3-215ENST00000475470 HOOK1Q9UJC3 728 aaKnown RBP17.58■□□□□ 0.4
RPUSD3-215ENST00000475470 PCDHA4Q9UN74 947 aa17.58■□□□□ 0.4
RPUSD3-215ENST00000475470 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.58■□□□□ 0.4
RPUSD3-215ENST00000475470 PLIN4Q96Q06 1357 aa17.58■□□□□ 0.4
RPUSD3-215ENST00000475470 TRAPPC10P48553 1259 aa17.57■□□□□ 0.4
RPUSD3-215ENST00000475470 RASGRP2Q7LDG7 609 aa17.57■□□□□ 0.4
RPUSD3-215ENST00000475470 FERMT2Q96AC1 680 aa17.57■□□□□ 0.4
RPUSD3-215ENST00000475470 SPZ1Q9BXG8 430 aa17.57■□□□□ 0.4
RPUSD3-215ENST00000475470 POLR2DO15514 142 aaKnown RBP17.57■□□□□ 0.4
RPUSD3-215ENST00000475470 HDLBPQ00341 1268 aaKnown RBP17.57■□□□□ 0.4
RPUSD3-215ENST00000475470 KIAA2012Q0VF49 1180 aa17.57■□□□□ 0.4
RPUSD3-215ENST00000475470 NFIAQ12857 509 aa17.57■□□□□ 0.4
RPUSD3-215ENST00000475470 PNOCQ13519 176 aa17.57■□□□□ 0.4
RPUSD3-215ENST00000475470 WWC2Q6AWC2 1192 aa17.57■□□□□ 0.4
RPUSD3-215ENST00000475470 AOPEPQ8N6M6 819 aa17.57■□□□□ 0.4
RPUSD3-215ENST00000475470 BARHL2Q9NY43 387 aa17.57■□□□□ 0.4
RPUSD3-215ENST00000475470 TUBE1Q9UJT0 475 aa17.57■□□□□ 0.4
RPUSD3-215ENST00000475470 WNT7AO00755 349 aa17.56■□□□□ 0.4
RPUSD3-215ENST00000475470 BAG6P46379 1132 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms