RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 PRRC2BQ5JSZ5 2229 aaKnown RBP17.31■□□□□ 0.36
ATG9A-220ENST00000475339 DCDC2CA8MYV0 355 aa17.3■□□□□ 0.36
ATG9A-220ENST00000475339 SMIM22K7EJ46 135 aa17.3■□□□□ 0.36
ATG9A-220ENST00000475339 COBLO75128 1261 aa17.3■□□□□ 0.36
ATG9A-220ENST00000475339 PGK1P00558 417 aa17.3■□□□□ 0.36
ATG9A-220ENST00000475339 PPIGQ13427 754 aaKnown RBP eCLIP17.3■□□□□ 0.363e-8■□□□□ 9.4
ATG9A-220ENST00000475339 ZNF365Q70YC5 407 aa17.3■□□□□ 0.36
ATG9A-220ENST00000475339 ERICH6Q7L0X2 663 aa17.3■□□□□ 0.36
ATG9A-220ENST00000475339 HERVK_113Q902F9 699 aa17.3■□□□□ 0.36
ATG9A-220ENST00000475339 TOX2Q96NM4 488 aa17.3■□□□□ 0.36
ATG9A-220ENST00000475339 SIL1Q9H173 461 aa17.3■□□□□ 0.36
ATG9A-220ENST00000475339 CEP126Q9P2H0 1117 aa17.3■□□□□ 0.36
ATG9A-220ENST00000475339 TBX21Q9UL17 535 aa17.3■□□□□ 0.36
ATG9A-220ENST00000475339 TLL1O43897 1013 aa17.29■□□□□ 0.36
ATG9A-220ENST00000475339 CSF2RAP15509 400 aa17.29■□□□□ 0.36
ATG9A-220ENST00000475339 CCDC174Q6PII3 467 aa17.29■□□□□ 0.36
ATG9A-220ENST00000475339 CATSPERGQ6ZRH7 1159 aa17.29■□□□□ 0.36
ATG9A-220ENST00000475339 RNF180Q86T96 592 aa17.29■□□□□ 0.36
ATG9A-220ENST00000475339 TEX11Q8IYF3 940 aa17.29■□□□□ 0.36
ATG9A-220ENST00000475339 SMCHD1A6NHR9 2005 aa17.29■□□□□ 0.36
ATG9A-220ENST00000475339 IPO8O15397 1037 aaKnown RBP17.28■□□□□ 0.36
ATG9A-220ENST00000475339 MAP4K4O95819 1239 aaPredicted RBP17.28■□□□□ 0.36
ATG9A-220ENST00000475339 RARBP10826 455 aa17.28■□□□□ 0.36
ATG9A-220ENST00000475339 LBX2Q6XYB7 198 aa17.28■□□□□ 0.36
ATG9A-220ENST00000475339 FRAT1Q92837 279 aaPredicted RBP17.28■□□□□ 0.36
ATG9A-220ENST00000475339 C12orf42Q96LP6 360 aa17.28■□□□□ 0.36
ATG9A-220ENST00000475339 PI4K2BG5E9Z4 385 aa17.27■□□□□ 0.36
ATG9A-220ENST00000475339 ZBTB22O15209 634 aa17.27■□□□□ 0.36
ATG9A-220ENST00000475339 CRACR2BQ8N4Y2 399 aaPredicted RBP17.27■□□□□ 0.36
ATG9A-220ENST00000475339 SH3RF3Q8TEJ3 882 aaPredicted RBP17.27■□□□□ 0.36
ATG9A-220ENST00000475339 FEZ1Q99689 392 aa17.27■□□□□ 0.36
ATG9A-220ENST00000475339 MOV10L1Q9BXT6 1211 aaKnown RBP17.27■□□□□ 0.36
ATG9A-220ENST00000475339 DHX36Q9H2U1 1008 aaKnown RBP17.27■□□□□ 0.36
ATG9A-220ENST00000475339 GINM1Q9NU53 330 aa17.27■□□□□ 0.36
ATG9A-220ENST00000475339 CACNA1AO00555 2505 aa17.27■□□□□ 0.36
ATG9A-220ENST00000475339 SIPA1L1O43166 1804 aa17.26■□□□□ 0.35
ATG9A-220ENST00000475339 PDS5AQ29RF7 1337 aaKnown RBP17.26■□□□□ 0.35
ATG9A-220ENST00000475339 SPDYE16A6NNV3 312 aaPredicted RBP17.26■□□□□ 0.35
ATG9A-220ENST00000475339 STRNO43815 780 aa17.26■□□□□ 0.35
ATG9A-220ENST00000475339 LDHCP07864 332 aa17.26■□□□□ 0.35
ATG9A-220ENST00000475339 VCAM1P19320 739 aa17.26■□□□□ 0.35
ATG9A-220ENST00000475339 PSRC1Q6PGN9 363 aaPredicted RBP17.26■□□□□ 0.35
ATG9A-220ENST00000475339 METTL16Q86W50 562 aaKnown RBP17.26■□□□□ 0.35
ATG9A-220ENST00000475339 FOXP4Q8IVH2 680 aaPredicted RBP17.26■□□□□ 0.35
ATG9A-220ENST00000475339 NSUN4Q96CB9 384 aaKnown RBP17.26■□□□□ 0.35
ATG9A-220ENST00000475339 TRIM34Q9BYJ4 488 aa17.26■□□□□ 0.35
ATG9A-220ENST00000475339 STARD7Q9NQZ5 370 aa17.26■□□□□ 0.35
ATG9A-220ENST00000475339 BCAR3O75815 825 aa17.25■□□□□ 0.35
ATG9A-220ENST00000475339 GH2P01242 217 aa17.25■□□□□ 0.35
ATG9A-220ENST00000475339 RABGGTBP53611 331 aa17.25■□□□□ 0.35
ATG9A-220ENST00000475339 GSTO1P78417 241 aa17.25■□□□□ 0.35
ATG9A-220ENST00000475339 NHLH1Q02575 133 aa17.25■□□□□ 0.35
ATG9A-220ENST00000475339 TBC1D9Q6ZT07 1266 aa17.25■□□□□ 0.35
ATG9A-220ENST00000475339 ARHGAP45Q92619 1136 aa17.25■□□□□ 0.35
ATG9A-220ENST00000475339 LENG1Q96BZ8 264 aaPredicted RBP17.25■□□□□ 0.35
ATG9A-220ENST00000475339 USP44Q9H0E7 712 aa17.25■□□□□ 0.35
ATG9A-220ENST00000475339 CD320Q9NPF0 282 aa17.25■□□□□ 0.35
ATG9A-220ENST00000475339 APBB1O00213 710 aa17.24■□□□□ 0.35
ATG9A-220ENST00000475339 RFXAPO00287 272 aa17.24■□□□□ 0.35
ATG9A-220ENST00000475339 CIAO1O76071 339 aa17.24■□□□□ 0.35
ATG9A-220ENST00000475339 ERCC3P19447 782 aa17.24■□□□□ 0.35
ATG9A-220ENST00000475339 PPP2R2DQ66LE6 453 aa17.24■□□□□ 0.35
ATG9A-220ENST00000475339 TMEM199Q8N511 208 aa17.24■□□□□ 0.35
ATG9A-220ENST00000475339 MAML3Q96JK9 1138 aa17.24■□□□□ 0.35
ATG9A-220ENST00000475339 SLC5A4Q9NY91 659 aa17.24■□□□□ 0.35
ATG9A-220ENST00000475339 PALD1Q9ULE6 856 aa17.24■□□□□ 0.35
ATG9A-220ENST00000475339 PRR33A8MZF0 331 aa17.23■□□□□ 0.35
ATG9A-220ENST00000475339 MYOGP15173 224 aa17.23■□□□□ 0.35
ATG9A-220ENST00000475339 ACLYP53396 1101 aa17.23■□□□□ 0.35
ATG9A-220ENST00000475339 TIMM10P62072 90 aa17.23■□□□□ 0.35
ATG9A-220ENST00000475339 ATF7IPQ6VMQ6 1270 aa17.23■□□□□ 0.35
ATG9A-220ENST00000475339 MAPKAPK5Q8IW41 473 aa17.23■□□□□ 0.35
ATG9A-220ENST00000475339 TGFBRAP1Q8WUH2 860 aa17.23■□□□□ 0.35
ATG9A-220ENST00000475339 PPP1R12CQ9BZL4 782 aa17.23■□□□□ 0.35
ATG9A-220ENST00000475339 RPAP3Q9H6T3 665 aaPredicted RBP17.23■□□□□ 0.35
ATG9A-220ENST00000475339 COG5Q9UP83 839 aa17.23■□□□□ 0.35
ATG9A-220ENST00000475339 MTCH2Q9Y6C9 303 aa17.23■□□□□ 0.35
ATG9A-220ENST00000475339 LRRC37A2A6NM11 1700 aa17.22■□□□□ 0.35
ATG9A-220ENST00000475339 ADAMTS4O75173 837 aa17.22■□□□□ 0.35
ATG9A-220ENST00000475339 TAL1P17542 331 aaPredicted RBP17.22■□□□□ 0.35
ATG9A-220ENST00000475339 USP14P54578 494 aa17.22■□□□□ 0.35
ATG9A-220ENST00000475339 ZKSCAN2Q63HK3 967 aa17.22■□□□□ 0.35
ATG9A-220ENST00000475339 KRT40Q6A162 431 aa17.22■□□□□ 0.35
ATG9A-220ENST00000475339 PI16Q6UXB8 463 aa17.22■□□□□ 0.35
ATG9A-220ENST00000475339 ACER1Q8TDN7 264 aa17.22■□□□□ 0.35
ATG9A-220ENST00000475339 NUP133Q8WUM0 1156 aa17.22■□□□□ 0.35
ATG9A-220ENST00000475339 YTHDC1Q96MU7 727 aaKnown RBP17.22■□□□□ 0.35
ATG9A-220ENST00000475339 UIMC1Q96RL1 719 aa17.22■□□□□ 0.35
ATG9A-220ENST00000475339 SPATC1LQ9H0A9 340 aa17.22■□□□□ 0.35
ATG9A-220ENST00000475339 KIAA1683Q9H0B3 1180 aa17.22■□□□□ 0.35
ATG9A-220ENST00000475339 RAI14Q9P0K7 980 aa17.22■□□□□ 0.35
ATG9A-220ENST00000475339 FBXO3Q9UK99 471 aa17.22■□□□□ 0.35
ATG9A-220ENST00000475339 ZNF236Q9UL36 1845 aa17.21■□□□□ 0.35
ATG9A-220ENST00000475339 GBF1Q92538 1859 aa17.21■□□□□ 0.35
ATG9A-220ENST00000475339 TRIM27P14373 513 aa17.21■□□□□ 0.35
ATG9A-220ENST00000475339 OTOP2Q7RTS6 562 aa17.21■□□□□ 0.35
ATG9A-220ENST00000475339 TSEN34Q9BSV6 310 aaKnown RBP17.21■□□□□ 0.35
ATG9A-220ENST00000475339 MTIF3Q9H2K0 278 aaKnown RBP17.21■□□□□ 0.35
ATG9A-220ENST00000475339 IL23AQ9NPF7 189 aa17.21■□□□□ 0.35
ATG9A-220ENST00000475339 AATFQ9NY61 560 aaKnown RBP eCLIP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms