RNA–Protein interactions for RNA: ENST00000475325.1

FRMD4A-205, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 875 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-205ENST00000475325 CLIP2Q9UDT6 1046 aa11.07□□□□□ -0.64
FRMD4A-205ENST00000475325 SCAF8Q9UPN6 1271 aaKnown RBP11.07□□□□□ -0.64
FRMD4A-205ENST00000475325 CNTNAP5Q8WYK1 1306 aa11.07□□□□□ -0.64
FRMD4A-205ENST00000475325 PITPNM2Q9BZ72 1349 aa11.07□□□□□ -0.64
FRMD4A-205ENST00000475325 PALM3A6NDB9 673 aaPredicted RBP11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 PRPF3O43395 683 aaKnown RBP11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 DEXIO95424 95 aa11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 PARP1P09874 1014 aaKnown RBP11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 GUCY1A2P33402 732 aa11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 MCM4P33991 863 aa11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 FOSBP53539 338 aa11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 ATP2B2Q01814 1243 aa11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 AKAP17AQ02040 695 aaKnown RBP11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 ICA1Q05084 483 aa11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 RRP1BQ14684 758 aaKnown RBP11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 MIGA2Q7L4E1 593 aa11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 CMTR1Q8N1G2 835 aaKnown RBP11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 LRRC47Q8N1G4 583 aaKnown RBP11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 SRBD1Q8N5C6 995 aaKnown RBP11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 MKL1Q969V6 931 aa11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 HOOK2Q96ED9 719 aa11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 LZTS2Q9BRK4 669 aa11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 MAD2L2Q9UI95 211 aa11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 MTMR7Q9Y216 660 aa11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 ATP6V1DQ9Y5K8 247 aa11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 PPP2R3BQ9Y5P8 575 aa11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 WDR90Q96KV7 1748 aa11.06□□□□□ -0.64
FRMD4A-205ENST00000475325 GLTPD2A6NH11 291 aa11.05□□□□□ -0.64
FRMD4A-205ENST00000475325 DDX11L8A8MPP1 907 aa11.05□□□□□ -0.64
FRMD4A-205ENST00000475325 PDHBP11177 359 aa11.05□□□□□ -0.64
FRMD4A-205ENST00000475325 EEF2P13639 858 aaKnown RBP11.05□□□□□ -0.64
FRMD4A-205ENST00000475325 JAG1P78504 1218 aa11.05□□□□□ -0.64
FRMD4A-205ENST00000475325 RESTQ13127 1097 aa11.05□□□□□ -0.64
FRMD4A-205ENST00000475325 DCAF15Q66K64 600 aa11.05□□□□□ -0.64
FRMD4A-205ENST00000475325 STAG2Q8N3U4 1231 aa11.05□□□□□ -0.64
FRMD4A-205ENST00000475325 CCDC82Q8N4S0 544 aa11.05□□□□□ -0.64
FRMD4A-205ENST00000475325 FBXO18Q8NFZ0 1043 aa11.05□□□□□ -0.64
FRMD4A-205ENST00000475325 AIFM3Q96NN9 605 aa11.05□□□□□ -0.64
FRMD4A-205ENST00000475325 RBM27Q9P2N5 1060 aaKnown RBP11.05□□□□□ -0.64
FRMD4A-205ENST00000475325 ZBTB21Q9ULJ3 1066 aa11.05□□□□□ -0.64
FRMD4A-205ENST00000475325 USP17L5A8MUK1 530 aa11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 PHF20L1A8MW92 1017 aa11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 GOLGA6L22H0YM25 854 aa11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 SNHG28P0DPA3 235 aa11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 CAP2P40123 477 aa11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 GUCY1B3Q02153 619 aa11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 TRIM29Q14134 588 aa11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 ASPRV1Q53RT3 343 aa11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 NBPF12Q5TAG4 269 aaPredicted RBP11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 USP17L2Q6R6M4 530 aa11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 FERMT3Q86UX7 667 aa11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 SIAH1Q8IUQ4 282 aa11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 ZSCAN16Q9H4T2 348 aaPredicted RBP11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 ARHGEF10LQ9HCE6 1279 aa11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 GINM1Q9NU53 330 aa11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 SYNPO2Q9UMS6 1093 aa11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 V9GY48 417 aaPredicted RBP11.04□□□□□ -0.64
FRMD4A-205ENST00000475325 KLRF2D3W0D1 207 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 UBE2Q2LH0YL09 131 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 ASNSP08243 561 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 GOLGA8HP0CJ92 632 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 SMARCA1P28370 1054 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 EPHX2P34913 555 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 ZNF543Q08ER8 600 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 NBR1Q14596 966 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 PKN1Q16512 942 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 KRT40Q6A162 431 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 MCTP1Q6DN14 999 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 OTUD7BQ6GQQ9 843 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 USP50Q70EL3 339 aaPredicted RBP11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 RASGRP2Q7LDG7 609 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 GMCL1P1Q8NEA9 526 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 DCAF4Q8WV16 495 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 DCPSQ96C86 337 aaKnown RBP11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 SPZ1Q9BXG8 430 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 ZNF341Q9BYN7 854 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 GJB4Q9NTQ9 266 aa11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 FRMPD2Q68DX3 1309 aaPredicted RBP11.03□□□□□ -0.64
FRMD4A-205ENST00000475325 IQCA1LA6NCM1 817 aa11.02□□□□□ -0.65
FRMD4A-205ENST00000475325 CTNND1O60716 968 aaKnown RBP11.02□□□□□ -0.65
FRMD4A-205ENST00000475325 SCG2P13521 617 aa11.02□□□□□ -0.65
FRMD4A-205ENST00000475325 XBP1P17861 261 aa11.02□□□□□ -0.65
FRMD4A-205ENST00000475325 PTMSP20962 102 aa11.02□□□□□ -0.65
FRMD4A-205ENST00000475325 PFKFB3Q16875 520 aaPredicted RBP11.02□□□□□ -0.65
FRMD4A-205ENST00000475325 CCDC96Q2M329 555 aa11.02□□□□□ -0.65
FRMD4A-205ENST00000475325 SLC35G1Q2M3R5 365 aa11.02□□□□□ -0.65
FRMD4A-205ENST00000475325 FOXD4L6Q3SYB3 417 aaPredicted RBP11.02□□□□□ -0.65
FRMD4A-205ENST00000475325 SUPT20HL1Q3ZLR7 823 aa11.02□□□□□ -0.65
FRMD4A-205ENST00000475325 GPATCH4Q5T3I0 446 aaKnown RBP11.02□□□□□ -0.65
FRMD4A-205ENST00000475325 SLFN13Q68D06 897 aa11.02□□□□□ -0.65
FRMD4A-205ENST00000475325 FOXD4L3Q6VB84 417 aaPredicted RBP11.02□□□□□ -0.65
FRMD4A-205ENST00000475325 ZC3H15Q8WU90 426 aaKnown RBP11.02□□□□□ -0.65
FRMD4A-205ENST00000475325 CHAMP1Q96JM3 812 aa11.02□□□□□ -0.65
FRMD4A-205ENST00000475325 SSC5DA1L4H1 1573 aa11.02□□□□□ -0.65
FRMD4A-205ENST00000475325 OTOFQ9HC10 1997 aa11.01□□□□□ -0.65
FRMD4A-205ENST00000475325 PAPPA2Q9BXP8 1791 aa11.01□□□□□ -0.65
FRMD4A-205ENST00000475325 PHIPQ8WWQ0 1821 aa11.01□□□□□ -0.65
FRMD4A-205ENST00000475325 hCG_1642624A0A1W2PR95 340 aa11.01□□□□□ -0.65
FRMD4A-205ENST00000475325 A0A1W2PRG0 241 aa11.01□□□□□ -0.65
FRMD4A-205ENST00000475325 F5H6K3 240 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms