RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 MCM9Q9NXL9 1143 aa21.6■■□□□ 1.05
PCGF3-209ENST00000475288 SWAP70Q9UH65 585 aa21.6■■□□□ 1.05
PCGF3-209ENST00000475288 FAM109BQ6ICB4 259 aaPredicted RBP21.59■■□□□ 1.05
PCGF3-209ENST00000475288 TRPV1Q8NER1 839 aa21.59■■□□□ 1.05
PCGF3-209ENST00000475288 MOV10L1Q9BXT6 1211 aaKnown RBP21.59■■□□□ 1.05
PCGF3-209ENST00000475288 SPATC1LQ9H0A9 340 aa21.59■■□□□ 1.05
PCGF3-209ENST00000475288 CYP2C19P33261 490 aa21.58■■□□□ 1.05
PCGF3-209ENST00000475288 ABRAQ8N0Z2 381 aa21.58■■□□□ 1.05
PCGF3-209ENST00000475288 CLASRPQ8N2M8 674 aaKnown RBP21.58■■□□□ 1.05
PCGF3-209ENST00000475288 KIF1BPQ96EK5 621 aa21.58■■□□□ 1.05
PCGF3-209ENST00000475288 ZNF532Q9HCE3 1301 aa21.57■■□□□ 1.04
PCGF3-209ENST00000475288 ADORA2AP29274 412 aa21.57■■□□□ 1.04
PCGF3-209ENST00000475288 CNGA1P29973 690 aa21.57■■□□□ 1.04
PCGF3-209ENST00000475288 HNRNPUQ00839 825 aaKnown RBP eCLIP21.57■■□□□ 1.04
PCGF3-209ENST00000475288 MDM2Q00987 491 aaPredicted RBP21.57■■□□□ 1.04
PCGF3-209ENST00000475288 Q7L0L9 218 aa21.57■■□□□ 1.04
PCGF3-209ENST00000475288 DPP9Q86TI2 863 aa21.57■■□□□ 1.04
PCGF3-209ENST00000475288 ARRDC4Q8NCT1 418 aa21.57■■□□□ 1.04
PCGF3-209ENST00000475288 LBHD1Q9BQE6 289 aaPredicted RBP21.57■■□□□ 1.04
PCGF3-209ENST00000475288 MROH8Q9H579 483 aa21.57■■□□□ 1.04
PCGF3-209ENST00000475288 SH2D4AQ9H788 454 aa21.57■■□□□ 1.04
PCGF3-209ENST00000475288 IL1RAPL2Q9NP60 686 aa21.57■■□□□ 1.04
PCGF3-209ENST00000475288 SLC5A4Q9NY91 659 aa21.57■■□□□ 1.04
PCGF3-209ENST00000475288 UNC80Q8N2C7 3258 aa21.57■■□□□ 1.04
PCGF3-209ENST00000475288 MYH8P13535 1937 aa21.57■■□□□ 1.04
PCGF3-209ENST00000475288 MPHOSPH10O00566 681 aaKnown RBP21.56■■□□□ 1.04
PCGF3-209ENST00000475288 RPAP2Q8IXW5 612 aaPredicted RBP21.56■■□□□ 1.04
PCGF3-209ENST00000475288 SDR42E1Q8WUS8 393 aa21.56■■□□□ 1.04
PCGF3-209ENST00000475288 TANGO6Q9C0B7 1094 aa21.56■■□□□ 1.04
PCGF3-209ENST00000475288 ATP8A2Q9NTI2 1148 aa21.56■■□□□ 1.04
PCGF3-209ENST00000475288 TMX2Q9Y320 296 aa21.56■■□□□ 1.04
PCGF3-209ENST00000475288 LTBP2Q14767 1821 aa21.56■■□□□ 1.04
PCGF3-209ENST00000475288 PARP14Q460N5 1801 aa21.55■■□□□ 1.04
PCGF3-209ENST00000475288 POTEB2H3BUK9 544 aa21.55■■□□□ 1.04
PCGF3-209ENST00000475288 GOLIM4O00461 696 aa21.55■■□□□ 1.04
PCGF3-209ENST00000475288 SEPT4O43236 478 aa21.55■■□□□ 1.04
PCGF3-209ENST00000475288 MS4A1P11836 297 aa21.55■■□□□ 1.04
PCGF3-209ENST00000475288 ERCC3P19447 782 aa21.55■■□□□ 1.04
PCGF3-209ENST00000475288 DSG3P32926 999 aa21.55■■□□□ 1.04
PCGF3-209ENST00000475288 LCORLQ8N3X6 602 aa21.55■■□□□ 1.04
PCGF3-209ENST00000475288 CCDC17Q96LX7 622 aa21.55■■□□□ 1.04
PCGF3-209ENST00000475288 ARHGEF10LQ9HCE6 1279 aa21.55■■□□□ 1.04
PCGF3-209ENST00000475288 HMMRO75330 724 aa21.54■■□□□ 1.04
PCGF3-209ENST00000475288 EVX2Q03828 476 aa21.54■■□□□ 1.04
PCGF3-209ENST00000475288 SNX17Q15036 470 aa21.54■■□□□ 1.04
PCGF3-209ENST00000475288 SIAH1Q8IUQ4 282 aa21.54■■□□□ 1.04
PCGF3-209ENST00000475288 PANK1Q8TE04 598 aa21.54■■□□□ 1.04
PCGF3-209ENST00000475288 WDR46O15213 610 aaKnown RBP21.53■■□□□ 1.04
PCGF3-209ENST00000475288 COBLO75128 1261 aa21.53■■□□□ 1.04
PCGF3-209ENST00000475288 RAB11FIP3O75154 756 aa21.53■■□□□ 1.04
PCGF3-209ENST00000475288 IFIT2P09913 472 aaKnown RBP21.53■■□□□ 1.04
PCGF3-209ENST00000475288 RTP1P59025 263 aa21.53■■□□□ 1.04
PCGF3-209ENST00000475288 KIAA1755Q5JYT7 1200 aa21.53■■□□□ 1.04
PCGF3-209ENST00000475288 DNAJC2Q99543 621 aaKnown RBP21.53■■□□□ 1.04
PCGF3-209ENST00000475288 VCPKMTQ9H867 229 aa21.53■■□□□ 1.04
PCGF3-209ENST00000475288 PRKAG2Q9UGJ0 569 aa21.53■■□□□ 1.04
PCGF3-209ENST00000475288 NRBP1Q9UHY1 535 aa21.53■■□□□ 1.04
PCGF3-209ENST00000475288 ADD2P35612 726 aa21.52■■□□□ 1.04
PCGF3-209ENST00000475288 ICA1Q05084 483 aa21.52■■□□□ 1.04
PCGF3-209ENST00000475288 C1orf53Q5VUE5 145 aa21.52■■□□□ 1.04
PCGF3-209ENST00000475288 SLC44A5Q8NCS7 719 aa21.52■■□□□ 1.04
PCGF3-209ENST00000475288 PAG1Q9NWQ8 432 aa21.52■■□□□ 1.04
PCGF3-209ENST00000475288 ADAMTS5Q9UNA0 930 aa21.52■■□□□ 1.04
PCGF3-209ENST00000475288 KBTBD13C9JR72 458 aa21.51■■□□□ 1.03
PCGF3-209ENST00000475288 FLOT1O75955 427 aa21.51■■□□□ 1.03
PCGF3-209ENST00000475288 SLC25A27O95847 323 aa21.51■■□□□ 1.03
PCGF3-209ENST00000475288 CYP2D6P10635 497 aa21.51■■□□□ 1.03
PCGF3-209ENST00000475288 ATN1P54259 1190 aaPredicted RBP21.51■■□□□ 1.03
PCGF3-209ENST00000475288 C12orf60Q5U649 245 aa21.51■■□□□ 1.03
PCGF3-209ENST00000475288 SLC39A5Q6ZMH5 540 aa21.51■■□□□ 1.03
PCGF3-209ENST00000475288 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.51■■□□□ 1.031e-8■■■■■ 50
PCGF3-209ENST00000475288 ARMT1Q9H993 441 aa21.51■■□□□ 1.03
PCGF3-209ENST00000475288 ZBED9Q6R2W3 1325 aa21.51■■□□□ 1.03
PCGF3-209ENST00000475288 CUL9Q8IWT3 2517 aa21.51■■□□□ 1.03
PCGF3-209ENST00000475288 AKR1B1P15121 316 aa21.5■■□□□ 1.03
PCGF3-209ENST00000475288 ATP5JP18859 108 aa21.5■■□□□ 1.03
PCGF3-209ENST00000475288 GJC2Q5T442 439 aaPredicted RBP21.5■■□□□ 1.03
PCGF3-209ENST00000475288 ATG4CQ96DT6 458 aa21.5■■□□□ 1.03
PCGF3-209ENST00000475288 DYNLL2Q96FJ2 89 aa21.5■■□□□ 1.03
PCGF3-209ENST00000475288 MAML3Q96JK9 1138 aa21.5■■□□□ 1.03
PCGF3-209ENST00000475288 DDX19BQ9UMR2 479 aa21.5■■□□□ 1.03
PCGF3-209ENST00000475288 ROBO3Q96MS0 1386 aa21.49■■□□□ 1.03
PCGF3-209ENST00000475288 BAZ2AQ9UIF9 1905 aaKnown RBP21.49■■□□□ 1.03
PCGF3-209ENST00000475288 MBD4O95243 580 aa21.49■■□□□ 1.03
PCGF3-209ENST00000475288 FCER1AP12319 257 aa21.49■■□□□ 1.03
PCGF3-209ENST00000475288 UBE3CQ15386 1083 aa21.49■■□□□ 1.03
PCGF3-209ENST00000475288 C16orf86Q6ZW13 317 aa21.49■■□□□ 1.03
PCGF3-209ENST00000475288 NCAPG2Q86XI2 1143 aa21.49■■□□□ 1.03
PCGF3-209ENST00000475288 SIRT2Q8IXJ6 389 aa21.49■■□□□ 1.03
PCGF3-209ENST00000475288 AMOTL1Q8IY63 956 aa21.49■■□□□ 1.03
PCGF3-209ENST00000475288 ZBTB40Q9NUA8 1239 aa21.49■■□□□ 1.03
PCGF3-209ENST00000475288 DIS3Q9Y2L1 958 aaKnown RBP21.49■■□□□ 1.03
PCGF3-209ENST00000475288 MYH7P12883 1935 aa21.49■■□□□ 1.03
PCGF3-209ENST00000475288 COPB2P35606 906 aa21.48■■□□□ 1.03
PCGF3-209ENST00000475288 CDK8P49336 464 aa21.48■■□□□ 1.03
PCGF3-209ENST00000475288 PLS1Q14651 629 aa21.48■■□□□ 1.03
PCGF3-209ENST00000475288 TMEM132BQ14DG7 1078 aa21.48■■□□□ 1.03
PCGF3-209ENST00000475288 RIOX2Q8IUF8 465 aa21.48■■□□□ 1.03
PCGF3-209ENST00000475288 HAUS7Q99871 368 aa21.48■■□□□ 1.03
PCGF3-209ENST00000475288 KANSL2Q9H9L4 492 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms