RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 GSG1L2A8MUP6 293 aa13.74□□□□□ -0.21
HLA-DOB-208ENST00000475235 PITPNM1O00562 1244 aa13.74□□□□□ -0.21
HLA-DOB-208ENST00000475235 GRK4P32298 578 aa13.74□□□□□ -0.21
HLA-DOB-208ENST00000475235 CDK8P49336 464 aa13.74□□□□□ -0.21
HLA-DOB-208ENST00000475235 PDE1AP54750 535 aa13.74□□□□□ -0.21
HLA-DOB-208ENST00000475235 ZYXQ15942 572 aaKnown RBP13.74□□□□□ -0.21
HLA-DOB-208ENST00000475235 AXDND1Q5T1B0 1012 aaPredicted RBP13.74□□□□□ -0.21
HLA-DOB-208ENST00000475235 SLAIN1Q8ND83 568 aa13.74□□□□□ -0.21
HLA-DOB-208ENST00000475235 ACER1Q8TDN7 264 aa13.74□□□□□ -0.21
HLA-DOB-208ENST00000475235 SH3TC2Q8TF17 1288 aa13.74□□□□□ -0.21
HLA-DOB-208ENST00000475235 EVI5LQ96CN4 794 aa13.74□□□□□ -0.21
HLA-DOB-208ENST00000475235 P2RX7Q99572 595 aaKnown RBP13.74□□□□□ -0.21
HLA-DOB-208ENST00000475235 NACAP1Q9BZK3 213 aa13.74□□□□□ -0.21
HLA-DOB-208ENST00000475235 MYH1P12882 1939 aa13.73□□□□□ -0.21
HLA-DOB-208ENST00000475235 ATAD5Q96QE3 1844 aa13.73□□□□□ -0.21
HLA-DOB-208ENST00000475235 CYP2D7A0A087X1C5 515 aa13.73□□□□□ -0.21
HLA-DOB-208ENST00000475235 PATL2C9JE40 543 aaKnown RBP13.73□□□□□ -0.21
HLA-DOB-208ENST00000475235 APPP05067 770 aa13.73□□□□□ -0.21
HLA-DOB-208ENST00000475235 VCAM1P19320 739 aa13.73□□□□□ -0.21
HLA-DOB-208ENST00000475235 TDO2P48775 406 aa13.73□□□□□ -0.21
HLA-DOB-208ENST00000475235 IRF5Q13568 498 aa13.73□□□□□ -0.21
HLA-DOB-208ENST00000475235 GPRC5AQ8NFJ5 357 aa13.73□□□□□ -0.21
HLA-DOB-208ENST00000475235 ZNF287Q9HBT7 754 aa13.73□□□□□ -0.21
HLA-DOB-208ENST00000475235 ARHGEF10LQ9HCE6 1279 aa13.73□□□□□ -0.21
HLA-DOB-208ENST00000475235 PTPRFP10586 1907 aa13.72□□□□□ -0.21
HLA-DOB-208ENST00000475235 M0R2C6 588 aa13.72□□□□□ -0.21
HLA-DOB-208ENST00000475235 AKR1B1P15121 316 aa13.72□□□□□ -0.21
HLA-DOB-208ENST00000475235 FLT3LGP49771 235 aa13.72□□□□□ -0.21
HLA-DOB-208ENST00000475235 UBXN2AP68543 259 aa13.72□□□□□ -0.21
HLA-DOB-208ENST00000475235 ICA1Q05084 483 aa13.72□□□□□ -0.21
HLA-DOB-208ENST00000475235 ZMYM1Q5SVZ6 1142 aa13.72□□□□□ -0.21
HLA-DOB-208ENST00000475235 CATSPERGQ6ZRH7 1159 aa13.72□□□□□ -0.21
HLA-DOB-208ENST00000475235 PXYLP1Q8TE99 480 aa13.72□□□□□ -0.21
HLA-DOB-208ENST00000475235 LPAR1Q92633 364 aa13.72□□□□□ -0.21
HLA-DOB-208ENST00000475235 LNPKQ9C0E8 428 aa13.72□□□□□ -0.21
HLA-DOB-208ENST00000475235 ROBO3Q96MS0 1386 aa13.71□□□□□ -0.21
HLA-DOB-208ENST00000475235 POTEFA5A3E0 1075 aa13.71□□□□□ -0.21
HLA-DOB-208ENST00000475235 MINDY4BA8MYZ0 360 aa13.71□□□□□ -0.21
HLA-DOB-208ENST00000475235 B4GALNT3Q6L9W6 998 aa13.71□□□□□ -0.21
HLA-DOB-208ENST00000475235 CHD1LQ86WJ1 897 aa13.71□□□□□ -0.21
HLA-DOB-208ENST00000475235 RPAP3Q9H6T3 665 aaPredicted RBP13.71□□□□□ -0.21
HLA-DOB-208ENST00000475235 KANSL2Q9H9L4 492 aa13.71□□□□□ -0.21
HLA-DOB-208ENST00000475235 MKNK2Q9HBH9 465 aa13.71□□□□□ -0.21
HLA-DOB-208ENST00000475235 GABRQQ9UN88 632 aa13.71□□□□□ -0.21
HLA-DOB-208ENST00000475235 TMX2Q9Y320 296 aa13.71□□□□□ -0.21
HLA-DOB-208ENST00000475235 A0A1W2PRG0 241 aa13.7□□□□□ -0.22
HLA-DOB-208ENST00000475235 ADCY3O60266 1144 aa13.7□□□□□ -0.22
HLA-DOB-208ENST00000475235 IGHDP01880 384 aa13.7□□□□□ -0.22
HLA-DOB-208ENST00000475235 MAPK4P31152 587 aa13.7□□□□□ -0.22
HLA-DOB-208ENST00000475235 ERVK-9P63128 1117 aa13.7□□□□□ -0.22
HLA-DOB-208ENST00000475235 ERVK-24P63145 666 aa13.7□□□□□ -0.22
HLA-DOB-208ENST00000475235 NUCB1Q02818 461 aa13.7□□□□□ -0.22
HLA-DOB-208ENST00000475235 LBX2Q6XYB7 198 aa13.7□□□□□ -0.22
HLA-DOB-208ENST00000475235 CCAR1Q8IX12 1150 aaKnown RBP13.7□□□□□ -0.22
HLA-DOB-208ENST00000475235 IFNL3Q8IZI9 196 aa13.7□□□□□ -0.22
HLA-DOB-208ENST00000475235 SEC62Q99442 399 aaKnown RBP13.7□□□□□ -0.22
HLA-DOB-208ENST00000475235 EPB41L4AQ9HCS5 686 aaPredicted RBP13.7□□□□□ -0.22
HLA-DOB-208ENST00000475235 RBPJLQ9UBG7 517 aa13.7□□□□□ -0.22
HLA-DOB-208ENST00000475235 BIN2Q9UBW5 565 aaPredicted RBP13.7□□□□□ -0.22
HLA-DOB-208ENST00000475235 RABGAP1Q9Y3P9 1069 aa13.7□□□□□ -0.22
HLA-DOB-208ENST00000475235 SMIM22K7EJ46 135 aa13.69□□□□□ -0.22
HLA-DOB-208ENST00000475235 MAFGO15525 162 aa13.69□□□□□ -0.22
HLA-DOB-208ENST00000475235 SLC3A2P08195 630 aaKnown RBP13.69□□□□□ -0.22
HLA-DOB-208ENST00000475235 CCNA1P78396 465 aa13.69□□□□□ -0.22
HLA-DOB-208ENST00000475235 SOCS4Q8WXH5 440 aa13.69□□□□□ -0.22
HLA-DOB-208ENST00000475235 PAGR1Q9BTK6 254 aa13.69□□□□□ -0.22
HLA-DOB-208ENST00000475235 NAPBQ9H115 298 aa13.69□□□□□ -0.22
HLA-DOB-208ENST00000475235 VCPKMTQ9H867 229 aa13.69□□□□□ -0.22
HLA-DOB-208ENST00000475235 TXNRD2Q9NNW7 524 aa13.69□□□□□ -0.22
HLA-DOB-208ENST00000475235 MYCP01106 439 aaPredicted RBP13.69□□□□□ -0.22
HLA-DOB-208ENST00000475235 COG2Q14746 738 aa13.69□□□□□ -0.22
HLA-DOB-208ENST00000475235 ZNF444Q8N0Y2 327 aaPredicted RBP13.69□□□□□ -0.22
HLA-DOB-208ENST00000475235 NKX2-3Q8TAU0 364 aa13.69□□□□□ -0.22
HLA-DOB-208ENST00000475235 OSBPL3Q9H4L5 887 aa13.69□□□□□ -0.22
HLA-DOB-208ENST00000475235 HELLSQ9NRZ9 838 aa13.69□□□□□ -0.22
HLA-DOB-208ENST00000475235 HOXC10Q9NYD6 342 aa13.69□□□□□ -0.22
HLA-DOB-208ENST00000475235 ZSWIM8A7E2V4 1837 aa13.68□□□□□ -0.22
HLA-DOB-208ENST00000475235 TRIM6-TRIM34B2RNG4 842 aa13.68□□□□□ -0.22
HLA-DOB-208ENST00000475235 WDR46O15213 610 aaKnown RBP13.68□□□□□ -0.22
HLA-DOB-208ENST00000475235 EEF2P13639 858 aaKnown RBP13.68□□□□□ -0.22
HLA-DOB-208ENST00000475235 EN2P19622 333 aaPredicted RBP13.68□□□□□ -0.22
HLA-DOB-208ENST00000475235 RASA1P20936 1047 aa13.68□□□□□ -0.22
HLA-DOB-208ENST00000475235 FAM193AP78312 1265 aa13.68□□□□□ -0.22
HLA-DOB-208ENST00000475235 PDE4BQ07343 736 aa13.68□□□□□ -0.22
HLA-DOB-208ENST00000475235 SIAH1Q8IUQ4 282 aa13.68□□□□□ -0.22
HLA-DOB-208ENST00000475235 NUDT12Q9BQG2 462 aa13.68□□□□□ -0.22
HLA-DOB-208ENST00000475235 TANGO6Q9C0B7 1094 aa13.68□□□□□ -0.22
HLA-DOB-208ENST00000475235 CWC22Q9HCG8 908 aaKnown RBP13.68□□□□□ -0.22
HLA-DOB-208ENST00000475235 GOPCQ9HD26 462 aa13.68□□□□□ -0.22
HLA-DOB-208ENST00000475235 MYH7P12883 1935 aa13.67□□□□□ -0.22
HLA-DOB-208ENST00000475235 SPDYE16A6NNV3 312 aaPredicted RBP13.67□□□□□ -0.22
HLA-DOB-208ENST00000475235 INHAP05111 366 aa13.67□□□□□ -0.22
HLA-DOB-208ENST00000475235 CCL5P13501 91 aa13.67□□□□□ -0.22
HLA-DOB-208ENST00000475235 CAPN2P17655 700 aa13.67□□□□□ -0.22
HLA-DOB-208ENST00000475235 ATP2B2Q01814 1243 aa13.67□□□□□ -0.22
HLA-DOB-208ENST00000475235 MTFR1Q15390 333 aa13.67□□□□□ -0.22
HLA-DOB-208ENST00000475235 Q3C1V9 767 aa13.67□□□□□ -0.22
HLA-DOB-208ENST00000475235 CHRDL2Q6WN34 429 aa13.67□□□□□ -0.22
HLA-DOB-208ENST00000475235 CLEC10AQ8IUN9 316 aa13.67□□□□□ -0.22
HLA-DOB-208ENST00000475235 RNF208Q9H0X6 261 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms